Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2983.1 Capsicum annuum HOM05D001026 ORTHO05D022183 1.8e-50 202.2 99 100.0
CAN.G33.1 Capsicum annuum HOM05D001026 ORTHO05D003027 2.7e-49 198.4 97 100.0
CAN.G33.2 Capsicum annuum HOM05D001026 ORTHO05D003027 2.7e-49 198.4 97 100.0
PGSC0003DMG400020699 Solanum tuberosum HOM05D001026 ORTHO05D003027 1.7e-40 169.1 87 90.8
Solyc07g014590.4 Solanum lycopersicum HOM05D001026 ORTHO05D003027 1.1e-39 166.4 87 89.7
Sopen07g005470 Solanum pennellii HOM05D001026 ORTHO05D003027 1.1e-39 166.4 87 89.7
Nitab4.5_0000053g0170 Nicotiana tabacum HOM05D001026 ORTHO05D003027 3.2e-39 164.9 87 89.7
PGSC0003DMG400030253 Solanum tuberosum HOM05D001026 ORTHO05D022183 9.5e-39 163.3 88 85.2
Peaxi162Scf00889g00224 Petunia axillaris HOM05D001026 ORTHO05D003027 4.7e-38 161.0 85 90.6
Hund09047 Selenicereus undatus HOM05D001026 ORTHO05D003027 4.9e-35 151.0 86 77.9
Sabra18G0112200 Salix brachista HOM05D001026 ORTHO05D003027 6.3e-35 150.6 87 77.0
Gohir.D04G007100 Gossypium hirsutum HOM05D001026 ORTHO05D003027 8.3e-35 150.2 87 75.9
Gorai.012G008800 Gossypium raimondii HOM05D001026 ORTHO05D003027 8.3e-35 150.2 87 75.9
Actinidia38514 Actinidia chinensis HOM05D001026 ORTHO05D003027 1.4e-34 149.4 85 77.6
Rhsim03G0268200 Rhododendron simsii HOM05D001026 ORTHO05D003027 2.4e-34 148.7 87 75.9
Sabra06G0052700 Salix brachista HOM05D001026 ORTHO05D003027 3.1e-34 148.3 87 74.7
Potri.006G070800 Populus trichocarpa HOM05D001026 ORTHO05D003027 5.4e-34 147.5 87 73.6
vmacro22289 Vaccinium macrocarpon HOM05D001026 ORTHO05D003027 7.0e-34 147.1 87 75.9
Dinv26458 Davidia involucrata HOM05D001026 ORTHO05D003027 9.2e-34 146.7 87 77.0
Nn8g41047 Nelumbo nucifera HOM05D001026 ORTHO05D003027 1.2e-33 146.4 85 76.5
FAN22G1176 Fragaria x ananassa HOM05D001026 ORTHO05D003027 2.7e-33 145.2 87 72.4
Cfa020723 Carpinus fangiana HOM05D001026 ORTHO05D003027 3.5e-33 144.8 87 73.6
Potri.018G132500 Populus trichocarpa HOM05D001026 ORTHO05D003027 3.5e-33 144.8 87 74.7
FAN07G0050 Fragaria x ananassa HOM05D001026 ORTHO05D003027 4.5e-33 144.4 87 72.4
HanXRQChr05g0136381 Helianthus annuus HOM05D001026 ORTHO05D003027 5.9e-33 144.1 82 79.3
GSVIVG01035168001 Vitis vinifera HOM05D001026 ORTHO05D003027 5.9e-33 144.1 87 74.7
CiPaw.15G154500 Carya illinoinensis HOM05D001026 ORTHO05D003027 7.8e-33 143.7 87 71.3
MELO3C017391.2 Cucumis melo HOM05D001026 ORTHO05D003027 7.8e-33 143.7 85 75.3
CsaV3_1G032200 Cucumis sativus L. HOM05D001026 ORTHO05D003027 7.8e-33 143.7 85 74.1
Manes.06G054000 Manihot esculenta HOM05D001026 ORTHO05D003027 7.8e-33 143.7 84 75.0
Prupe.1G067700 Prunus persica HOM05D001026 ORTHO05D003027 1.0e-32 143.3 85 76.5
TAR625G0921 Trochodendron aralioides HOM05D001026 ORTHO05D003027 1.0e-32 143.3 87 72.4
Ah.09g230140 Amaranthus hybridus HOM05D001026 ORTHO05D003027 1.7e-32 142.5 85 74.1
MD13G1236000 Malus domestica HOM05D001026 ORTHO05D003027 1.7e-32 142.5 87 75.9
MD16G1241000 Malus domestica HOM05D001026 ORTHO05D003027 1.7e-32 142.5 86 75.6
Cc10_g11550 Coffea canephora HOM05D001026 ORTHO05D003027 2.3e-32 142.1 86 76.7
Hma1.2p1_0314F.1_g121900 Hydrangea macrophylla HOM05D001026 ORTHO05D003027 2.3e-32 142.1 82 76.8
FvH4_4g06440 Fragaria vesca HOM05D001026 ORTHO05D003027 2.9e-32 141.7 87 71.3
FAN12G0904 Fragaria x ananassa HOM05D001026 ORTHO05D003027 2.9e-32 141.7 87 71.3
Aqoxy7G02694 Aquilegia oxysepala HOM05D001026 ORTHO05D003027 3.8e-32 141.4 86 72.1
Lj5A709G9 Lonicera japonica HOM05D001026 ORTHO05D003027 5.0e-32 141.0 83 73.5
Oeu000973.1 Olea europaea HOM05D001026 ORTHO05D003027 5.0e-32 141.0 83 73.5
Eucgr.C02189 Eucalyptus grandis HOM05D001026 ORTHO05D003027 8.6e-32 140.2 83 73.5
PGR044G2410 Punica granatum HOM05D001026 ORTHO05D003027 8.6e-32 140.2 83 77.1
COL.COLO4_23451 Corchorus olitorius HOM05D001026 ORTHO05D003027 1.1e-31 139.8 86 73.3
Duzib168G0491 Durio zibethinus HOM05D001026 ORTHO05D003027 1.1e-31 139.8 82 76.8
Migut.J00824 Erythranthe guttata HOM05D001026 ORTHO05D003027 1.1e-31 139.8 82 73.2
QL11p009474 Quercus lobata HOM05D001026 ORTHO05D003027 1.1e-31 139.8 87 72.4
Thhalv10016275m.g Eutrema salsugineum HOM05D001026 ORTHO05D003027 1.5e-31 139.4 87 72.4
TWI32G1029 Tripterygium wilfordii HOM05D001026 ORTHO05D003027 1.5e-31 139.4 81 77.8
Phvul.002G303600 Phaseolus vulgaris HOM05D001026 ORTHO05D003027 1.9e-31 139.0 83 75.9
EL10Ac8g18322 Beta vulgaris HOM05D001026 ORTHO05D003027 2.5e-31 138.7 85 74.1
ECA236G4714 Erigeron canadensis HOM05D001026 ORTHO05D003027 2.5e-31 138.7 82 75.6
RcHm_v2.0_Chr4g0398221 Rosa chinensis HOM05D001026 ORTHO05D003027 2.5e-31 138.7 87 70.1
Sed0017236 Sechium edule HOM05D001026 ORTHO05D003027 2.5e-31 138.7 89 69.7
SGA_v2.0_scaffold31G12733 Striga asiatica HOM05D001026 ORTHO05D003027 2.5e-31 138.7 87 70.1
Atru.chr7.979 Acer truncatum HOM05D001026 ORTHO05D003027 5.6e-31 137.5 87 70.1
AUR62033250 Chenopodium quinoa HOM05D001026 ORTHO05D003027 7.3e-31 137.1 86 72.1
PSO063G6530 Papaver somniferum HOM05D001026 ORTHO05D003027 7.3e-31 137.1 85 75.3
arahy.Tifrunner.gnm1.ann1.TNRR0X Arachis hypogaea HOM05D001026 ORTHO05D003027 1.2e-30 136.3 83 74.7
THA.LOC104826981 Tarenaya hassleriana HOM05D001026 ORTHO05D003027 1.2e-30 136.3 86 72.1
Thecc.09G189800 Theobroma cacao HOM05D001026 ORTHO05D003027 1.2e-30 136.3 83 74.7
Nitab4.5_0008119g0010 Nicotiana tabacum HOM05D001026 ORTHO05D003027 1.6e-30 136.0 68 91.2
unitig_578.g15826 Utricularia gibba HOM05D001026 ORTHO05D003027 1.6e-30 136.0 83 71.1
A05p06490 Brassica napus HOM05D001026 ORTHO05D003027 2.1e-30 135.6 87 71.3
BraA05t19617Z Brassica rapa HOM05D001026 ORTHO05D003027 2.1e-30 135.6 87 71.3
VMungo0251G0311 Vigna mungo HOM05D001026 ORTHO05D003027 2.1e-30 135.6 82 73.2
MSTRG.5953 Avicennia marina HOM05D001026 ORTHO05D003027 2.8e-30 135.2 86 68.6
Ca_17409_v3 Cicer arietinum L. HOM05D001026 ORTHO05D003027 2.8e-30 135.2 83 71.1
Lj4g0023046 Lotus japonicus HOM05D001026 ORTHO05D003027 2.8e-30 135.2 87 70.1
PSO170G5814 Papaver somniferum HOM05D001026 ORTHO05D003027 2.8e-30 135.2 85 72.9
arahy.Tifrunner.gnm1.ann1.8UPE10 Arachis hypogaea HOM05D001026 ORTHO05D003027 3.6e-30 134.8 83 73.5
BcaB02g09070 Brassica carinata HOM05D001026 ORTHO05D003027 3.6e-30 134.8 87 70.1
CARHR134850 Cardamine hirsuta HOM05D001026 ORTHO05D003027 3.6e-30 134.8 87 70.1
Psat7g021960 Pisum sativum HOM05D001026 ORTHO05D003027 4.7e-30 134.4 83 69.9
C04p07570 Brassica napus HOM05D001026 ORTHO05D003027 6.1e-30 134.0 87 70.1
BolC4t22374H Brassica oleracea HOM05D001026 ORTHO05D003027 6.1e-30 134.0 87 70.1
DCAR_010517 Daucus carota HOM05D001026 ORTHO05D003027 6.1e-30 134.0 85 70.6
AUR62021335 Chenopodium quinoa HOM05D001026 ORTHO05D003027 8.0e-30 133.7 86 68.6
Ciclev10007489m.g Citrus clementina HOM05D001026 ORTHO05D003027 8.0e-30 133.7 87 69.0
Sp4g22240 Schrenkiella parvula HOM05D001026 ORTHO05D003027 8.0e-30 133.7 87 70.1
Carub.0004s2206 Capsella rubella HOM05D001026 ORTHO05D003027 1.4e-29 132.9 87 69.0
Glyma.08G028400 Glycine max HOM05D001026 ORTHO05D003027 1.4e-29 132.9 86 67.4
Lsat_1_v5_gn_8_70320 Lactuca sativa HOM05D001026 ORTHO05D003027 1.8e-29 132.5 84 76.2
TPR.G25465 Trifolium pratense HOM05D001026 ORTHO05D003027 1.8e-29 132.5 83 71.1
AL4G37510 Arabidopsis lyrata HOM05D001026 ORTHO05D003027 2.3e-29 132.1 87 67.8
Lalb_Chr16g0390891 Lupinus albus HOM05D001026 ORTHO05D003027 2.3e-29 132.1 87 67.8
Medtr8g101490 Medicago truncatula HOM05D001026 ORTHO05D003027 3.0e-29 131.7 83 72.3
SalBow6G3178 Salvia bowleyana HOM05D001026 ORTHO05D003027 4.0e-29 131.3 82 69.5
MBI16_g18205_MAGBIO Magnolia biondii HOM05D001026 ORTHO05D003027 5.2e-29 131.0 83 71.1
Os08g0520900 Oryza sativa ssp. japonica HOM05D001026 ORTHO05D003027 5.2e-29 131.0 84 69.0
AT2G39930 Arabidopsis thaliana HOM05D001026 ORTHO05D003027 6.8e-29 130.6 86 68.6
CANSAT80G2343 Cannabis sativa HOM05D001026 ORTHO05D003027 1.2e-28 129.8 82 65.9
ATR0626G365 Amborella trichopoda HOM05D001026 ORTHO05D003027 5.7e-28 127.5 84 65.5
HPP92_010797 Vanilla planifolia HOM05D001026 ORTHO05D003027 3.7e-27 124.8 84 66.7
Aa31LG5G19690 Aethionema arabicum HOM05D001026 ORTHO05D003027 6.4e-27 124.0 83 68.7
Zm00001eb174590 Zea mays HOM05D001026 ORTHO05D003027 2.4e-26 122.1 82 63.4
ClCG06G013990 Citrullus lanatus HOM05D001026 ORTHO05D003027 3.2e-26 121.7 72 72.2
SEGI_21844 Sequoiadendron giganteum HOM05D001026 ORTHO05D003027 7.0e-26 120.6 87 65.5
CSS0026477 Camellia sinensis var. sinensis HOM05D001026 ORTHO05D003027 9.2e-26 120.2 79 69.6
Zm00001eb237800 Zea mays HOM05D001026 ORTHO05D022183 1.2e-25 119.8 82 63.4
Zm00001eb086090 Zea mays HOM05D001026 ORTHO05D022183 3.5e-25 118.2 82 62.2
SMO367G0997 Selaginella moellendorffii HOM05D001026 ORTHO05D003027 5.9e-25 117.5 86 59.3
Zm00001eb415340 Zea mays HOM05D001026 ORTHO05D022183 5.9e-25 117.5 82 62.2
Zm00001eb199510 Zea mays HOM05D001026 ORTHO05D022183 5.0e-24 114.4 82 59.8
Pp3c14_11860 Physcomitrium patens HOM05D001026 ORTHO05D003027 6.6e-24 114.0 85 60.0
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 5.6e-23 110.9 80 63.8
Mapoly0016s0146 Marchantia polymorpha HOM05D001026 ORTHO05D003027 2.3e-21 105.5 86 54.7
Actinidia29970 Actinidia chinensis HOM05D001026 ORTHO05D023293 3.1e-21 105.1 59 74.6
Gohir.A05G408400 Gossypium hirsutum HOM05D001026 ORTHO05D003027 7.5e-20 100.5 53 79.2
CBR_g640 Chara braunii HOM05D001026 ORTHO05D003027 2.9e-19 98.6 82 53.7
Haze_19038 Corylus avellana HOM05D001026 ORTHO05D003027 3.7e-19 98.2 65 64.6
CDE07G1244 Ceratophyllum demersum HOM05D002718 ORTHO05D003027 2.7e-17 92.0 59 66.1
Cre03.g155001 Chlamydomonas reinhardtii HOM05D001026 ORTHO05D003027 2.4e-10 68.9 94 42.6


User provided reference genes

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