Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 4.6e-120 434.5 208 100.0
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 6.1e-56 221.5 108 99.1
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 2.3e-55 219.5 108 98.1
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 3.5e-51 205.7 108 92.6
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.0e-50 204.1 108 92.6
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 5.0e-50 201.8 108 91.7
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 3.3e-49 199.1 108 90.7
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 1.2e-48 197.2 108 89.8
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.1e-44 184.1 108 81.5
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.1e-44 184.1 105 83.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 3.2e-44 182.6 108 81.5
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 4.1e-44 182.2 101 85.1
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 5.4e-44 181.8 105 81.0
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 7.0e-44 181.4 106 82.1
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 6.0e-43 178.3 106 81.1
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 6.0e-43 178.3 109 82.6
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 6.0e-43 178.3 108 77.8
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 7.8e-43 177.9 106 83.0
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 7.8e-43 177.9 103 81.6
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.7e-42 176.8 100 84.0
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 2.3e-42 176.4 97 83.5
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.0e-42 176.0 106 79.2
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 3.9e-42 175.6 109 79.8
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 3.9e-42 175.6 108 80.6
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 3.9e-42 175.6 105 81.0
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 5.1e-42 175.3 103 78.6
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 5.1e-42 175.3 108 81.5
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 6.6e-42 174.9 108 79.6
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 6.6e-42 174.9 103 81.6
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.1e-41 174.1 106 79.2
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.1e-41 174.1 106 77.4
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.5e-41 173.7 108 77.8
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 1.9e-41 173.3 106 78.3
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 4.3e-41 172.2 108 75.9
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 5.6e-41 171.8 108 75.9
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 7.3e-41 171.4 103 76.7
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 9.5e-41 171.0 91 93.4
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 9.5e-41 171.0 101 80.2
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.2e-40 170.6 100 80.0
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 1.2e-40 170.6 101 78.2
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 2.1e-40 169.9 111 72.1
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 2.1e-40 169.9 101 77.2
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 2.1e-40 169.9 100 81.0
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 2.8e-40 169.5 101 81.2
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.6e-40 169.1 101 81.2
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 4.7e-40 168.7 100 81.0
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 6.2e-40 168.3 108 74.1
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 8.1e-40 167.9 100 79.0
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 5.2e-39 165.2 101 79.2
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 5.2e-39 165.2 100 77.0
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.2e-39 165.2 100 77.0
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.2e-39 165.2 100 77.0
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.2e-39 165.2 100 77.0
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 5.2e-39 165.2 100 78.0
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 5.2e-39 165.2 103 74.8
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 6.8e-39 164.9 100 78.0
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 8.9e-39 164.5 97 81.4
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.0e-38 163.3 100 76.0
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 2.0e-38 163.3 108 77.8
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 3.4e-38 162.5 102 73.5
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 5.8e-38 161.8 102 74.5
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 7.5e-38 161.4 102 74.5
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 9.9e-38 161.0 108 76.9
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 1.3e-37 160.6 108 75.0
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.2e-37 159.8 104 74.0
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 2.9e-37 159.5 97 76.3
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 3.7e-37 159.1 106 72.6
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.1e-36 157.5 102 75.5
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 1.9e-36 156.8 126 66.7
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 4.1e-36 155.6 106 70.8
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 5.4e-36 155.2 97 74.2
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 1.6e-35 153.7 100 72.0
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 2.1e-35 153.3 97 74.2
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 2.7e-35 152.9 97 76.3
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 2.7e-35 152.9 97 76.3
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 2.7e-35 152.9 97 76.3
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 4.6e-35 152.1 100 72.0
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 6.0e-35 151.8 97 75.3
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 7.8e-35 151.4 97 76.3
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 7.8e-35 151.4 97 76.3
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 7.8e-35 151.4 100 74.0
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 7.8e-35 151.4 100 74.0
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.3e-34 149.8 97 75.3
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 3.0e-34 149.4 97 74.2
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 3.9e-34 149.1 97 75.3
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 3.9e-34 149.1 97 75.3
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 3.9e-34 149.1 97 75.3
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 6.6e-34 148.3 97 75.3
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 8.6e-34 147.9 97 73.2
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 8.6e-34 147.9 103 73.8
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 1.1e-33 147.5 97 73.2
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.5e-33 147.1 97 72.2
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 2.5e-33 146.4 98 68.4
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 3.3e-33 146.0 101 69.3
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 4.4e-30 135.6 99 63.6
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 7.6e-30 134.8 77 83.1
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.9e-28 130.2 93 66.7
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.2e-27 127.5 110 60.9
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 4.3e-25 119.0 100 60.0
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.2e-24 117.5 104 55.8
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 2.1e-24 116.7 112 52.7
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 3.6e-24 115.9 102 52.9
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 4.7e-24 115.5 107 59.8
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 9.0e-23 111.3 104 52.9
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 4.4e-22 109.0 69 69.6
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 3.9e-18 95.9 111 43.2


User provided reference genes

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