Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 1.8e-103 379.4 211 100.0
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 3.0e-26 122.9 84 77.4
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 3.7e-24 115.9 91 65.9
CAN.G257.66 Capsicum annuum HOM05D010219 ORTHO05D012838 1.8e-23 113.6 85 74.1
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 1.8e-23 113.6 101 58.4
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 2.4e-23 113.2 97 57.7
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.1e-23 112.8 82 68.3
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 1.5e-22 110.5 98 56.1
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 2.6e-22 109.8 97 55.7
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 5.9e-22 108.6 72 75.0
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 1.3e-21 107.5 72 73.6
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 1.3e-21 107.5 72 73.6
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 5.0e-21 105.5 72 72.2
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 8.5e-21 104.8 99 52.5
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 8.5e-21 104.8 72 72.2
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 1.1e-20 104.4 99 51.5
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 1.5e-20 104.0 101 51.5
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 1.9e-20 103.6 101 51.5
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 5.5e-20 102.1 101 50.5
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 5.5e-20 102.1 101 49.5
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 5.5e-20 102.1 116 46.6
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 7.2e-20 101.7 101 50.5
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 7.2e-20 101.7 101 50.5
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 7.2e-20 101.7 101 50.5
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 9.4e-20 101.3 101 50.5
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.2e-19 100.9 135 44.4
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 1.6e-19 100.5 101 48.5
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 2.1e-19 100.1 135 44.4
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 2.1e-19 100.1 123 45.5
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 2.7e-19 99.8 72 69.4
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 3.0e-18 96.3 105 49.5
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 1.5e-17 94.0 101 45.5
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.2e-16 90.1 78 53.8
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 2.2e-16 90.1 70 61.4
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 2.8e-16 89.7 85 54.1
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 2.8e-16 89.7 72 61.1
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 2.8e-16 89.7 73 58.9
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 2.8e-16 89.7 70 62.9
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 3.7e-16 89.4 70 58.6
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 4.8e-16 89.0 74 59.5
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 6.3e-16 88.6 70 61.4
PGSC0003DMG400022970 Solanum tuberosum HOM05D010219 ORTHO05D012838 8.2e-16 88.2 90 72.2
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 1.1e-15 87.8 73 58.9
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 1.1e-15 87.8 73 58.9
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 1.4e-15 87.4 73 58.9
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.4e-15 87.4 67 62.7
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 2.4e-15 86.7 67 62.7
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 3.1e-15 86.3 67 61.2
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 3.1e-15 86.3 72 55.6
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 4.1e-15 85.9 58 65.5
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 5.3e-15 85.5 88 51.1
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 7.0e-15 85.1 72 58.3
CAN.G566.23 Capsicum annuum HOM05D000103 ORTHO05D012838 9.1e-15 84.7 92 69.6
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 9.1e-15 84.7 74 55.4
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 9.1e-15 84.7 70 55.7
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 9.1e-15 84.7 70 55.7
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 9.1e-15 84.7 72 54.2
PGSC0003DMG400028024 Solanum tuberosum HOM05D010219 ORTHO05D012838 9.1e-15 84.7 90 70.0
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 1.2e-14 84.3 67 59.7
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 1.2e-14 84.3 70 55.7
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 1.2e-14 84.3 70 58.6
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 1.2e-14 84.3 70 57.1
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 1.6e-14 84.0 68 61.8
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 1.6e-14 84.0 72 54.2
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 1.6e-14 84.0 73 54.8
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 2.0e-14 83.6 70 57.1
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.6e-14 83.2 67 61.2
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 2.6e-14 83.2 74 52.7
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 3.5e-14 82.8 70 57.1
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 3.5e-14 82.8 72 56.9
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 4.5e-14 82.4 69 56.5
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 5.9e-14 82.0 67 59.7
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 5.9e-14 82.0 67 56.7
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 1.0e-13 81.3 90 47.8
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.0e-13 81.3 43 93.0
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 1.0e-13 81.3 92 47.8
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 1.0e-13 81.3 67 56.7
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 1.7e-13 80.5 70 55.7
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 1.7e-13 80.5 70 55.7
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 1.7e-13 80.5 90 47.8
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 2.2e-13 80.1 50 74.0
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 5.0e-13 79.0 72 51.4
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 5.0e-13 79.0 70 55.7
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 8.5e-13 78.2 86 48.8
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 8.5e-13 78.2 52 71.2
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 1.1e-12 77.8 50 74.0
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 1.5e-12 77.4 74 51.4
CAN.G771.68 Capsicum annuum HOM05D003692 ORTHO05D004295 3.2e-12 76.3 90 67.8
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 3.2e-12 76.3 70 52.9
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 5.5e-12 75.5 74 52.7
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 7.2e-12 75.1 70 51.4
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 7.2e-12 75.1 74 51.4
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 9.4e-12 74.7 74 52.7
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 9.4e-12 74.7 58 56.9
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 1.2e-11 74.3 70 50.0
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.6e-11 73.9 70 51.4
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 8.0e-11 71.6 63 54.0
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 4.4e-09 65.9 40 77.5
Nitab4.5_0002043g0070 Nicotiana tabacum HOM05D010219 ORTHO05D012838 7.5e-09 65.1 91 62.6
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 1.3e-08 64.3 44 65.9
Cfa002018 Carpinus fangiana HOM05D000082 ORTHO05D000038 2.2e-08 63.5 98 43.9
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 2.8e-08 63.2 64 53.1
CAN.G439.41 Capsicum annuum HOM05D000595 ORTHO05D001274 6.3e-08 62.0 39 69.2
Sopen02g005880 Solanum pennellii HOM05D000004 ORTHO05D000002 8.3e-08 61.6 39 64.1
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 1.8e-07 60.5 53 49.1
CAN.G687.15 Capsicum annuum HOM05D000004 ORTHO05D000002 2.4e-07 60.1 38 71.1
Sopen10g010880 Solanum pennellii HOM05D000004 ORTHO05D000034 4.1e-07 59.3 146 28.8
CAN.G1102.2 Capsicum annuum HOM05D001597 ORTHO05D001512 5.4e-07 58.9 39 66.7
CAN.G391.4 Capsicum annuum HOM05D001438 ORTHO05D001336 9.1e-07 58.2 38 68.4
CAN.G529.6 Capsicum annuum HOM05D010219 ORTHO05D012838 1.2e-06 57.8 53 64.2
Sopen09g014680 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-06 57.0 39 61.5
Sopen01g008790 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.2 39 59.0
Sopen05g022250 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.2 39 56.4
Sopen10g010060 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-06 56.2 38 60.5
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 4.5e-06 55.8 50 48.0
Sopen04g009790 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-06 55.8 39 56.4
Sopen11g014700 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-06 55.8 39 56.4
Sopen12g017050 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-06 55.8 39 61.5
Nitab4.5_0009736g0010 Nicotiana tabacum HOM05D010219 ORTHO05D012838 5.9e-06 55.5 88 58.0
Sopen02g004070 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-06 55.5 39 59.0
Sopen09g016340 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-06 55.5 39 61.5
Sopen11g011750 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-06 55.5 39 59.0
Sopen11g020810 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-06 55.5 39 64.1
Sopen11g021640 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-06 55.5 38 57.9
Sopen11g023250 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-06 55.5 48 43.8
Sopen03g014670 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.1 38 57.9
Sopen04g015260 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.1 39 56.4
Sopen05g021310 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.1 39 59.0
Sopen08g008370 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.1 39 56.4
Sopen08g011730 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.1 39 56.4
Sopen09g019510 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.1 39 59.0
Sopen11g008040 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.1 39 59.0
Sopen11g014960 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.1 39 53.8


User provided reference genes

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