Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 1.9e-113 412.5 207 100.0
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 1.9e-113 412.5 207 100.0
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 1.9e-113 412.5 207 100.0
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.9e-113 412.5 207 100.0
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 4.3e-110 401.4 207 97.6
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 1.6e-109 399.4 207 97.6
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 5.3e-108 394.4 207 96.1
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 2.0e-107 392.5 207 96.1
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 6.4e-106 387.5 207 94.7
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 3.2e-105 385.2 207 95.2
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 3.2e-105 385.2 207 95.2
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 3.2e-105 385.2 207 95.2
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 3.2e-105 385.2 207 95.2
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 3.2e-105 385.2 207 95.2
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 3.2e-105 385.2 207 95.2
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 4.2e-105 384.8 207 94.7
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 1.2e-104 383.3 207 93.7
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 2.1e-104 382.5 207 94.7
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 1.3e-103 379.8 207 94.2
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 3.3e-102 375.2 207 92.3
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 3.3e-102 375.2 207 92.3
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 2.1e-101 372.5 207 91.3
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 3.7e-101 371.7 207 91.3
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 1.4e-100 369.8 207 93.2
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 1.4e-100 369.8 207 91.3
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 4.0e-100 368.2 196 94.9
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 9.0e-100 367.1 207 89.9
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 5.8e-99 364.4 207 92.3
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 5.5e-97 357.8 195 92.3
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 7.2e-89 330.9 207 85.0
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 4.6e-88 328.2 177 93.8
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 7.4e-86 320.9 207 82.6
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.7e-80 302.4 177 89.8
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 4.7e-80 301.6 207 76.8
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 5.1e-79 298.1 161 92.5
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 3.7e-77 292.0 160 91.9
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 1.8e-76 289.7 160 91.2
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 2.6e-70 269.2 146 93.8
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 6.5e-66 254.6 153 84.3
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 2.3e-63 246.1 146 87.7
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 7.7e-59 231.1 158 79.7
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 6.1e-56 221.5 114 98.2
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 3.0e-55 219.2 132 83.3
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 5.0e-50 201.8 100 95.0
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 4.4e-46 188.7 99 97.0
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 1.1e-41 174.1 105 85.7
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 1.5e-41 173.7 96 88.5
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 1.9e-41 173.3 99 90.9
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.8e-40 169.5 91 94.5
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 6.8e-39 164.9 123 70.7
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 1.0e-34 151.0 99 82.8
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 3.0e-34 149.4 87 90.8
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 3.1e-31 139.4 146 56.2
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 4.7e-24 115.5 66 89.4
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 1.4e-23 114.0 59 96.6
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 5.2e-23 112.1 67 91.0
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 3.9e-18 95.9 58 77.6
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 6.8e-15 85.1 88 59.1
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 1.4e-07 60.8 108 41.7
Sc04g0005550 Simmondsia chinensis HOM05D008280 ORTHO05D051001 2.6e-06 56.6 40 70.0


User provided reference genes

Program Settings