Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G241.36 Capsicum annuum HOM05D000888 ORTHO05D000740 1.0e-75 286.6 137 100.0
CAN.G346.7 Capsicum annuum HOM05D000888 ORTHO05D000740 7.4e-42 174.1 110 73.6
Solyc08g006190.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 7.4e-42 174.1 130 62.3
CAN.G241.37 Capsicum annuum HOM05D000888 ORTHO05D000740 1.2e-31 140.2 126 56.3
Sopen08g002160 Solanum pennellii HOM05D000888 ORTHO05D000740 1.7e-30 136.3 122 54.1
Peaxi162Scf00045g01642 Petunia axillaris HOM05D000888 ORTHO05D000740 6.1e-28 127.9 135 48.1
CAN.G757.4 Capsicum annuum HOM05D000888 ORTHO05D000740 2.8e-25 119.0 125 49.6
CAN.G1941.1 Capsicum annuum HOM05D000888 ORTHO05D000740 3.7e-25 118.6 108 55.6
Sopen08g002180 Solanum pennellii HOM05D000888 ORTHO05D000740 4.8e-25 118.2 102 53.9
Solyc08g006210.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 8.2e-25 117.5 102 54.9
Sopen08g002240 Solanum pennellii HOM05D000888 ORTHO05D000740 1.1e-24 117.1 128 47.7
CAN.G137.44 Capsicum annuum HOM05D000888 ORTHO05D000740 1.8e-24 116.3 108 52.8
CAN.G546.36 Capsicum annuum HOM05D000888 ORTHO05D000740 3.1e-24 115.5 98 49.0
PGSC0003DMG400043722 Solanum tuberosum HOM05D000888 ORTHO05D000740 3.1e-24 115.5 101 52.5
CAN.G1342.8 Capsicum annuum HOM05D000888 ORTHO05D000740 5.9e-23 111.3 95 51.6
PGSC0003DMG401009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 5.9e-23 111.3 141 45.4
Nitab4.5_0000025g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.3e-22 110.2 95 53.7
Nitab4.5_0006661g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.7e-22 109.8 95 51.6
CAN.G137.56 Capsicum annuum HOM05D000888 ORTHO05D000740 5.0e-22 108.2 97 51.5
CAN.G673.4 Capsicum annuum HOM05D000888 ORTHO05D000740 5.0e-22 108.2 95 50.5
Peaxi162Scf00326g00321 Petunia axillaris HOM05D000888 ORTHO05D000740 1.2e-20 103.6 93 52.7
Dinv00373 Davidia involucrata HOM05D000888 ORTHO05D000740 1.6e-20 103.2 94 46.8
Dinv01509 Davidia involucrata HOM05D000888 ORTHO05D000740 1.6e-20 103.2 94 46.8
Sopen08g002170 Solanum pennellii HOM05D000888 ORTHO05D000740 1.6e-20 103.2 144 43.1
Sopen08g002210 Solanum pennellii HOM05D000888 ORTHO05D000740 1.6e-20 103.2 102 52.0
Nitab4.5_0010282g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.1e-20 102.8 99 48.5
Solyc08g006220.4 Solanum lycopersicum HOM05D000888 ORTHO05D000740 4.7e-20 101.7 99 52.5
Nitab4.5_0012696g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 8.0e-20 100.9 94 50.0
CAN.G137.57 Capsicum annuum HOM05D000888 ORTHO05D000740 1.8e-19 99.8 139 40.3
Cc07_g12890 Coffea canephora HOM05D000888 ORTHO05D000740 2.3e-19 99.4 113 40.7
Solyc08g006200.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 3.0e-19 99.0 116 44.0
Cc08_g08270 Coffea canephora HOM05D000888 ORTHO05D000740 6.8e-19 97.8 91 46.2
PGSC0003DMG400026314 Solanum tuberosum HOM05D000888 ORTHO05D000740 4.4e-18 95.1 98 42.9
CAN.G137.58 Capsicum annuum HOM05D000888 ORTHO05D000740 2.2e-17 92.8 108 43.5
Sopen08g002450 Solanum pennellii HOM05D000301 ORTHO05D000303 3.7e-17 92.0 95 42.1
CAN.G1238.26 Capsicum annuum HOM05D000888 ORTHO05D000740 1.1e-16 90.5 110 45.5
Peaxi162Scf00045g01638 Petunia axillaris HOM05D000888 ORTHO05D000740 1.8e-16 89.7 125 39.2
CAN.G220.18 Capsicum annuum HOM05D000886 ORTHO05D000525 3.1e-16 89.0 111 46.8
CAN.G220.23 Capsicum annuum HOM05D000888 ORTHO05D000740 3.1e-16 89.0 89 48.3
Nitab4.5_0000555g0110 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.1e-16 89.0 129 38.0
Sopen08g002250 Solanum pennellii HOM05D000888 ORTHO05D000740 9.1e-16 87.4 101 42.6
Cc05_g09350 Coffea canephora HOM05D000888 ORTHO05D000740 1.6e-15 86.7 122 38.5
Nitab4.5_0008877g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.6e-15 86.7 119 40.3
Nitab4.5_0013923g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.6e-15 86.7 135 37.0
Cc08_g06160 Coffea canephora HOM05D000888 ORTHO05D000740 3.5e-15 85.5 102 37.3
Nitab4.5_0012696g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.5e-15 85.1 92 40.2
Nitab4.5_0000555g0080 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.0e-14 84.0 92 40.2
PGSC0003DMG402009541 Solanum tuberosum HOM05D000888 ORTHO05D000740 8.5e-14 80.9 108 36.1
Nitab4.5_0007342g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.9e-13 79.7 102 38.2
Peaxi162Scf00205g00721 Petunia axillaris HOM05D000888 ORTHO05D000740 1.9e-13 79.7 117 36.8
Sopen08g002220 Solanum pennellii HOM05D000888 ORTHO05D000740 2.5e-13 79.3 104 35.6
CAN.G1238.29 Capsicum annuum HOM05D000888 ORTHO05D000740 5.5e-13 78.2 127 36.2
Actinidia06436 Actinidia chinensis HOM05D000888 ORTHO05D000740 1.2e-12 77.0 94 39.4
Solyc08g006240.3 Solanum lycopersicum HOM05D000888 ORTHO05D000740 1.2e-12 77.0 108 34.3
Nitab4.5_0000555g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 4.7e-12 75.1 75 45.3
Solyc08g006270.1 Solanum lycopersicum HOM05D000888 ORTHO05D000740 4.7e-12 75.1 93 40.9
Sopen08g002190 Solanum pennellii HOM05D000888 ORTHO05D000740 4.7e-12 75.1 124 37.1
CAN.G241.28 Capsicum annuum HOM05D000888 ORTHO05D000740 1.4e-11 73.6 98 38.8
CAN.G757.1 Capsicum annuum HOM05D000888 ORTHO05D000740 1.8e-11 73.2 100 39.0
Nitab4.5_0000025g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.0e-11 72.4 80 43.8
Manes.03G005400 Manihot esculenta HOM05D000888 ORTHO05D000740 5.2e-11 71.6 138 32.6
ECA233G5043 Erigeron canadensis HOM05D000888 ORTHO05D000740 6.8e-11 71.2 122 39.3
Nitab4.5_0008877g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 8.8e-11 70.9 91 37.4
Peaxi162Scf00192g01213 Petunia axillaris HOM05D000888 ORTHO05D000740 2.6e-10 69.3 87 39.1
CAN.G673.5 Capsicum annuum HOM05D000888 ORTHO05D000740 7.5e-10 67.8 91 38.5
Nitab4.5_0000555g0020 Nicotiana tabacum HOM05D000888 ORTHO05D000740 7.5e-10 67.8 72 43.1
Nitab4.5_0000555g0060 Nicotiana tabacum HOM05D000888 ORTHO05D000740 7.5e-10 67.8 88 40.9
Lsat_1_v5_gn_1_43600 Lactuca sativa HOM05D000888 ORTHO05D000740 9.8e-10 67.4 124 36.3
HanXRQChr01g0030501 Helianthus annuus HOM05D000888 ORTHO05D000740 1.7e-09 66.6 94 35.1
Peaxi162Scf00346g00002 Petunia axillaris HOM05D000888 ORTHO05D000740 2.2e-09 66.2 60 51.7
CAN.G1632.18 Capsicum annuum HOM05D000888 ORTHO05D000740 2.8e-09 65.9 99 32.3
CAN.G220.17 Capsicum annuum HOM05D000888 ORTHO05D000740 2.8e-09 65.9 127 37.0
Sc07g0007340 Simmondsia chinensis HOM05D000888 ORTHO05D000740 2.8e-09 65.9 87 41.4
Thecc.09G009500 Theobroma cacao HOM05D000888 ORTHO05D000740 2.8e-09 65.9 128 35.2
C03p87660 Brassica napus HOM05D000888 ORTHO05D000740 3.7e-09 65.5 98 35.7
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 3.7e-09 65.5 98 35.7
Nitab4.5_0003259g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.7e-09 65.5 88 38.6
CSS0028692 Camellia sinensis var. sinensis HOM05D000888 ORTHO05D000740 6.3e-09 64.7 79 40.5
Lsat_1_v5_gn_1_43540 Lactuca sativa HOM05D000888 ORTHO05D000740 6.3e-09 64.7 94 41.5
Nitab4.5_0000025g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 6.3e-09 64.7 93 40.9
Peaxi162Scf01723g00002 Petunia axillaris HOM05D000888 ORTHO05D000740 6.3e-09 64.7 60 51.7
BcaC01g01071 Brassica carinata HOM05D000305 ORTHO05D000740 1.1e-08 63.9 87 37.9
CAN.G220.19 Capsicum annuum HOM05D000886 ORTHO05D000525 1.4e-08 63.5 82 47.6
CAN.G757.8 Capsicum annuum HOM05D000888 ORTHO05D000740 1.4e-08 63.5 63 52.4
Cc07_g12880 Coffea canephora HOM05D000888 ORTHO05D000740 1.8e-08 63.2 128 29.7
Nitab4.5_0008877g0040 Nicotiana tabacum HOM05D000888 ORTHO05D000740 1.8e-08 63.2 100 40.0
Nitab4.5_0008877g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 2.4e-08 62.8 132 28.8
TWI63G1187 Tripterygium wilfordii HOM05D000888 ORTHO05D000740 2.4e-08 62.8 98 36.7
HanXRQChr01g0014891 Helianthus annuus HOM05D000888 ORTHO05D000740 3.1e-08 62.4 82 37.8
Nitab4.5_0000555g0030 Nicotiana tabacum HOM05D000888 ORTHO05D000740 3.1e-08 62.4 139 32.4
BcaB04g18619 Brassica carinata HOM05D000888 ORTHO05D000740 4.1e-08 62.0 90 34.4
BcaC01g04147 Brassica carinata HOM05D000888 ORTHO05D000740 5.4e-08 61.6 96 34.4
C03p44630 Brassica napus HOM05D000888 ORTHO05D000740 5.4e-08 61.6 96 34.4
Nitab4.5_0000025g0140 Nicotiana tabacum HOM05D000888 ORTHO05D000740 5.4e-08 61.6 96 34.4
Nitab4.5_0010282g0010 Nicotiana tabacum HOM05D000888 ORTHO05D000740 7.0e-08 61.2 134 27.6
Solyc08g006483.1 Solanum lycopersicum HOM05D000888 ORTHO05D000740 7.0e-08 61.2 93 39.8
Sopen08g002260 Solanum pennellii HOM05D000888 ORTHO05D000740 7.0e-08 61.2 127 35.4
PGSC0003DMG400013589 Solanum tuberosum HOM05D000888 ORTHO05D000740 7.0e-08 61.2 92 38.0
CAN.G757.6 Capsicum annuum HOM05D000888 ORTHO05D000740 9.1e-08 60.8 78 39.7
Solyc08g006230.4 Solanum lycopersicum HOM05D000888 ORTHO05D000740 9.1e-08 60.8 80 38.8
AT4G31615 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 1.2e-07 60.5 119 33.6
A08p18500 Brassica napus HOM05D000888 ORTHO05D000740 1.6e-07 60.1 88 35.2
Peaxi162Scf00045g01537 Petunia axillaris HOM05D000888 ORTHO05D000740 1.6e-07 60.1 128 32.8
Thhalv10000515m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 2.0e-07 59.7 96 33.3
HanXRQChr01g0030511 Helianthus annuus HOM05D000888 ORTHO05D000740 2.0e-07 59.7 91 35.2
Solyc08g006280.2 Solanum lycopersicum HOM05D000888 ORTHO05D000740 3.5e-07 58.9 118 33.9
Peaxi162Scf01636g00008 Petunia axillaris HOM05D000888 ORTHO05D000740 4.5e-07 58.5 41 58.5
Lsat_1_v5_gn_1_43960 Lactuca sativa HOM05D000888 ORTHO05D000740 7.7e-07 57.8 126 31.0
Peaxi162Scf00045g01644 Petunia axillaris HOM05D000180 ORTHO05D000740 7.7e-07 57.8 126 31.0
BcaB04g18618 Brassica carinata HOM05D000888 ORTHO05D000740 1.0e-06 57.4 116 30.2
A03p36850 Brassica napus HOM05D000888 ORTHO05D000740 1.0e-06 57.4 96 31.2
Carub.0004s0406 Capsella rubella HOM05D000888 ORTHO05D000740 1.3e-06 57.0 125 31.2
A03p36860 Brassica napus HOM05D000888 ORTHO05D000740 1.7e-06 56.6 93 31.2
BraA03t12849Z Brassica rapa HOM05D000888 ORTHO05D000740 1.7e-06 56.6 93 31.2
CARHR085640 Cardamine hirsuta HOM05D000888 ORTHO05D000740 1.7e-06 56.6 90 32.2
Cc05_g09340 Coffea canephora HOM05D000888 ORTHO05D000740 2.3e-06 56.2 92 30.4
A03p60900 Brassica napus HOM05D000888 ORTHO05D000740 3.8e-06 55.5 99 31.3
C03p44660 Brassica napus HOM05D000888 ORTHO05D000740 3.8e-06 55.5 93 32.3
CAN.G950.1 Capsicum annuum HOM05D000888 ORTHO05D000740 3.8e-06 55.5 124 31.5
A05p38200 Brassica napus HOM05D000888 ORTHO05D000740 5.0e-06 55.1 87 39.1
AUR62020296 Chenopodium quinoa HOM05D000888 ORTHO05D000740 5.0e-06 55.1 119 31.1
BcaNung04126 Brassica carinata HOM05D000888 ORTHO05D000740 6.6e-06 54.7 99 28.3
BcaB06g27991 Brassica carinata HOM05D000888 ORTHO05D000740 8.6e-06 54.3 86 32.6
CARHR239590 Cardamine hirsuta HOM05D000888 ORTHO05D000740 8.6e-06 54.3 89 32.6
Thhalv10028050m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 8.6e-06 54.3 107 29.9


User provided reference genes

Program Settings