Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 5.8e-225 783.9 389 100.0
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 4.0e-202 708.0 399 89.2
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 4.6e-198 694.5 400 88.5
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 4.6e-198 694.5 400 88.5
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 7.9e-198 693.7 401 88.5
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 8.5e-176 620.5 381 83.2
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 5.7e-164 581.3 413 71.2
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 5.9e-161 571.2 398 75.6
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 6.5e-160 567.8 411 70.8
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 1.1e-159 567.0 411 71.3
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.9e-159 566.2 416 70.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 1.9e-159 566.2 405 72.6
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.6e-158 563.1 408 69.4
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.6e-158 563.1 417 70.3
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 2.1e-158 562.8 408 69.4
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 2.1e-158 562.8 408 69.4
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 2.7e-158 562.4 410 69.8
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 3.6e-158 562.0 420 68.8
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 6.1e-158 561.2 413 69.5
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 8.0e-158 560.8 425 68.5
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 1.4e-157 560.1 404 72.3
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.4e-157 560.1 413 69.7
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.3e-157 559.3 413 69.7
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.3e-157 559.3 414 69.1
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 2.3e-157 559.3 410 68.5
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 3.0e-157 558.9 410 68.3
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 5.2e-157 558.1 405 70.4
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 5.2e-157 558.1 405 70.6
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.2e-156 557.0 413 69.2
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 3.4e-156 555.4 396 69.7
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 4.4e-156 555.1 405 69.4
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 7.5e-156 554.3 416 69.2
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 7.5e-156 554.3 414 68.8
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.7e-155 552.0 405 69.1
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 3.7e-155 552.0 416 67.3
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.4e-154 550.1 440 66.4
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 1.8e-154 549.7 416 68.5
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 4.1e-154 548.5 416 68.5
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 5.4e-154 548.1 398 68.3
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 7.0e-154 547.7 394 72.8
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 9.1e-154 547.4 417 68.8
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 9.1e-154 547.4 396 69.7
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 1.6e-153 546.6 416 67.8
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 2.0e-153 546.2 417 68.6
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.7e-153 545.8 417 68.6
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.7e-153 545.8 396 69.2
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 3.8e-152 542.0 415 67.5
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 5.0e-152 541.6 421 67.0
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 6.6e-152 541.2 413 67.6
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.5e-151 540.0 402 67.2
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 1.9e-151 539.7 414 68.1
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 3.3e-151 538.9 417 66.2
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 5.5e-151 538.1 410 67.3
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 9.5e-151 537.3 393 68.4
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.2e-150 537.0 416 65.9
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 2.8e-150 535.8 426 66.9
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 3.6e-150 535.4 400 68.8
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 1.0e-149 533.9 411 67.2
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 1.4e-149 533.5 394 68.3
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 5.2e-149 531.6 423 66.9
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 3.4e-148 528.9 396 67.4
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 5.7e-148 528.1 418 67.0
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 5.7e-148 528.1 402 66.9
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 2.2e-147 526.2 397 67.8
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 3.7e-147 525.4 402 68.4
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 3.7e-147 525.4 410 67.3
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.2e-145 520.4 410 66.6
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 1.6e-145 520.0 415 65.3
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 2.0e-145 519.6 415 65.8
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 2.7e-145 519.2 419 65.4
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 4.5e-145 518.5 416 65.1
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.3e-144 516.9 415 65.1
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 1.7e-144 516.5 415 65.3
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.1e-143 513.8 404 66.8
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.2e-142 510.4 405 64.7
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 2.8e-142 509.2 422 64.9
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 2.8e-142 509.2 422 64.9
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 2.8e-142 509.2 422 64.9
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 5.2e-141 505.0 399 68.2
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 6.8e-141 504.6 419 64.4
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 8.9e-141 504.2 419 64.2
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 1.5e-140 503.4 386 67.9
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 3.7e-139 498.8 391 67.0
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 8.3e-139 497.7 412 64.1
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 4.1e-138 495.4 414 63.8
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 1.7e-136 490.0 371 67.7
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.7e-136 490.0 387 65.4
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 6.6e-136 488.0 388 65.5
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 8.0e-134 481.1 407 63.1
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.2e-132 477.2 416 63.0
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 4.4e-132 475.3 417 62.4
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 5.8e-132 474.9 410 62.4
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.6e-129 466.8 399 63.7
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.1e-125 454.1 478 53.1
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.6e-116 422.9 366 63.1
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 6.4e-115 418.3 252 83.7
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.6e-110 403.7 255 78.8
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 2.9e-107 392.9 255 78.0
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 3.2e-106 389.4 463 46.9
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 1.2e-100 370.9 230 78.3
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.9e-98 363.6 404 50.0
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 1.3e-96 357.5 465 43.2
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.1e-94 350.1 245 72.7
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.0e-92 343.6 245 71.8
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 1.1e-90 337.8 406 47.0
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 1.3e-83 314.3 463 41.9
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 1.9e-79 300.4 415 42.7
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 3.7e-70 269.6 287 53.3
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.4e-68 263.1 182 72.5
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 5.7e-47 192.6 163 54.6
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 2.7e-44 183.7 165 61.2
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 8.3e-38 162.2 463 28.1
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 1.2e-36 158.3 483 26.7
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 7.2e-34 149.1 191 47.6
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 3.2e-29 133.7 439 27.3
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 8.6e-27 125.6 120 53.3
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 2.0e-23 114.4 151 48.3
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 5.8e-23 112.8 98 61.2
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 4.9e-22 109.8 70 77.1
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 1.7e-11 74.7 105 41.9


User provided reference genes

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