Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G215.16 Capsicum annuum HOM05D002138 ORTHO05D002106 1.4e-119 433.0 222 100.0
Sopen02g009420 Solanum pennellii HOM05D002138 ORTHO05D000004 1.0e-16 91.3 85 60.0
Nitab4.5_0001298g0030 Nicotiana tabacum HOM05D002138 ORTHO05D002106 1.1e-15 87.8 59 79.7
Oeu052706.2 Olea europaea HOM05D002138 ORTHO05D002106 6.0e-09 65.5 50 68.0
Oeu009081.3 Olea europaea HOM05D002138 ORTHO05D002106 3.9e-08 62.8 50 64.0
Solyc02g069720.3 Solanum lycopersicum HOM05D002138 ORTHO05D002106 3.9e-08 62.8 52 69.2
Sopen02g018840 Solanum pennellii HOM05D002138 ORTHO05D002106 6.7e-08 62.0 52 69.2
CSS0019083 Camellia sinensis var. sinensis HOM05D002138 ORTHO05D002106 1.1e-07 61.2 48 64.6
Nitab4.5_0006863g0020 Nicotiana tabacum HOM05D002138 ORTHO05D002106 1.1e-07 61.2 52 71.2
Lj4g0018656 Lotus japonicus HOM05D002138 ORTHO05D002106 5.6e-07 58.9 50 62.0
PGSC0003DMG400021196 Solanum tuberosum HOM05D002138 ORTHO05D002106 5.6e-07 58.9 52 67.3
CARHR227210 Cardamine hirsuta HOM05D002138 ORTHO05D002106 7.4e-07 58.5 60 56.7
VMungo0251G0598 Vigna mungo HOM05D002138 ORTHO05D002106 1.3e-06 57.8 50 56.0
AL7G33510 Arabidopsis lyrata HOM05D002138 ORTHO05D002106 1.6e-06 57.4 57 56.1
Cc06_g12860 Coffea canephora HOM05D002138 ORTHO05D002106 1.6e-06 57.4 58 56.9
MD05G1263500 Malus domestica HOM05D002138 ORTHO05D002106 1.6e-06 57.4 48 62.5
MSTRG.6246 Avicennia marina HOM05D002138 ORTHO05D002106 2.1e-06 57.0 58 58.6
TAR626G1147 Trochodendron aralioides HOM05D002138 ORTHO05D002106 2.1e-06 57.0 63 50.8
AL7G46100 Arabidopsis lyrata HOM05D002138 ORTHO05D002106 2.8e-06 56.6 57 56.1
Glyma.08G129400 Glycine max HOM05D002138 ORTHO05D002106 2.8e-06 56.6 50 56.0
Glyma.U031408 Glycine max HOM05D002138 ORTHO05D002106 2.8e-06 56.6 50 54.0
Lsat_1_v5_gn_5_84081 Lactuca sativa HOM05D002138 ORTHO05D002106 2.8e-06 56.6 51 64.7
Lalb_Chr12g0204321 Lupinus albus HOM05D002138 ORTHO05D002106 2.8e-06 56.6 51 52.9
Oeu063150.1 Olea europaea HOM05D002138 ORTHO05D002106 3.6e-06 56.2 48 60.4
QL05p063069 Quercus lobata HOM05D002138 ORTHO05D002106 3.6e-06 56.2 50 58.0
Migut.J01511 Erythranthe guttata HOM05D002138 ORTHO05D002106 6.2e-06 55.5 50 58.0
ClCG01G025450 Citrullus lanatus HOM05D002138 ORTHO05D002106 8.1e-06 55.1 48 62.5
MELO3C007039.2 Cucumis melo HOM05D002138 ORTHO05D002106 8.1e-06 55.1 48 62.5
CsaV3_6G052700 Cucumis sativus L. HOM05D002138 ORTHO05D002106 8.1e-06 55.1 48 62.5
SalBow8G2330 Salvia bowleyana HOM05D002138 ORTHO05D002106 8.1e-06 55.1 50 58.0
SalBow8G3701 Salvia bowleyana HOM05D002138 ORTHO05D002106 8.1e-06 55.1 50 58.0


User provided reference genes

Program Settings