Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2148.1 Capsicum annuum HOM05D004263 ORTHO05D004931 1.4e-133 479.6 232 100.0
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 2.6e-124 448.7 231 93.1
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 2.6e-124 448.7 231 93.1
Nitab4.5_0001514g0010 Nicotiana tabacum HOM05D004263 ORTHO05D004931 3.4e-124 448.4 228 93.9
Nitab4.5_0000025g0490 Nicotiana tabacum HOM05D004263 ORTHO05D004931 2.5e-122 442.2 228 92.5
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 2.0e-119 432.6 228 91.2
CAN.G224.18 Capsicum annuum HOM05D004263 ORTHO05D004931 2.9e-115 418.7 231 88.7
MSTRG.11471 Avicennia marina HOM05D004263 ORTHO05D004931 9.1e-109 397.1 229 80.3
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 2.0e-108 396.0 229 81.7
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 5.9e-108 394.4 231 80.1
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 5.9e-108 394.4 231 81.0
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 1.0e-107 393.7 231 78.8
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 1.0e-107 393.7 231 81.0
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 1.3e-107 393.3 231 77.9
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 1.3e-107 393.3 231 80.1
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 1.7e-107 392.9 231 78.8
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 2.2e-107 392.5 231 79.2
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 5.0e-107 391.3 231 78.8
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 5.0e-107 391.3 231 78.4
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 8.5e-107 390.6 231 79.7
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 1.5e-106 389.8 228 79.8
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 1.9e-106 389.4 231 78.8
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 3.2e-106 388.7 231 78.8
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 4.2e-106 388.3 229 78.6
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 5.5e-106 387.9 231 78.8
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 5.5e-106 387.9 231 78.8
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 7.2e-106 387.5 231 78.8
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 7.2e-106 387.5 229 78.6
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 9.4e-106 387.1 231 77.5
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 2.1e-105 386.0 231 78.8
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 2.1e-105 386.0 231 77.5
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 6.1e-105 384.4 231 78.4
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 6.1e-105 384.4 231 77.9
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 3.0e-104 382.1 231 77.1
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 4.0e-104 381.7 231 77.9
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 4.0e-104 381.7 233 78.5
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 6.8e-104 380.9 229 77.7
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 6.8e-104 380.9 225 78.2
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 8.8e-104 380.6 231 75.8
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.2e-103 380.2 231 76.2
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 1.2e-103 380.2 231 76.2
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.2e-103 380.2 229 76.4
Cfa014543 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.5e-103 379.8 231 76.2
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 1.5e-103 379.8 231 74.5
MELO3C018764.2 Cucumis melo HOM05D004263 ORTHO05D004931 2.0e-103 379.4 231 75.3
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 3.4e-103 378.6 229 76.9
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 3.4e-103 378.6 231 75.3
QL08p037237 Quercus lobata HOM05D004263 ORTHO05D004931 4.4e-103 378.3 225 78.7
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 4.4e-103 378.3 225 78.7
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 1.3e-102 376.7 240 74.6
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.7e-102 376.3 229 76.0
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 2.2e-102 375.9 229 76.0
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 2.2e-102 375.9 231 74.9
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 4.8e-102 374.8 229 76.0
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 4.8e-102 374.8 231 74.0
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 4.8e-102 374.8 231 75.8
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 1.1e-101 373.6 229 75.1
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 1.4e-101 373.2 231 74.9
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 1.8e-101 372.9 231 74.5
unitig_0.g1433 Utricularia gibba HOM05D004263 ORTHO05D004931 1.8e-101 372.9 229 76.0
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 2.4e-101 372.5 228 75.4
BcaC05g25186 Brassica carinata HOM05D004263 ORTHO05D004931 2.4e-101 372.5 231 74.5
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 2.4e-101 372.5 231 74.9
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 3.1e-101 372.1 231 74.9
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 4.1e-101 371.7 231 75.3
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 4.1e-101 371.7 231 75.3
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 4.1e-101 371.7 231 73.6
TPR.G26159 Trifolium pratense HOM05D004263 ORTHO05D004931 4.1e-101 371.7 231 73.6
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 7.0e-101 370.9 228 75.9
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 7.0e-101 370.9 231 74.9
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 9.1e-101 370.5 231 74.5
VMungo1080G0385 Vigna mungo HOM05D004263 ORTHO05D004931 9.1e-101 370.5 231 72.7
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 1.2e-100 370.2 231 74.9
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.2e-100 370.2 229 74.2
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 2.0e-100 369.4 231 74.5
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 5.9e-100 367.9 231 74.9
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 5.9e-100 367.9 231 72.7
Sc08g0004410 Simmondsia chinensis HOM05D004263 ORTHO05D004931 5.9e-100 367.9 231 74.0
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 1.0e-99 367.1 231 74.0
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 1.7e-99 366.3 230 75.2
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 2.9e-99 365.5 231 73.2
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 1.5e-98 363.2 274 65.0
Dinv23715 Davidia involucrata HOM05D004263 ORTHO05D004931 1.5e-98 363.2 205 82.4
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 2.5e-98 362.5 230 74.3
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 9.5e-98 360.5 231 74.5
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 1.6e-97 359.8 231 72.7
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 2.1e-97 359.4 231 72.3
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 8.0e-97 357.5 231 72.7
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 6.8e-96 354.4 223 74.9
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 6.8e-96 354.4 231 69.7
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 8.8e-96 354.0 233 72.1
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 1.2e-95 353.6 206 81.1
PGSC0003DMG400025399 Solanum tuberosum HOM05D004263 ORTHO05D004931 1.7e-94 349.7 178 94.4
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 4.9e-94 348.2 231 71.9
Lj1C736T2 Lonicera japonica HOM05D004263 ORTHO05D004931 1.8e-93 346.3 204 81.9
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 5.4e-93 344.7 231 71.0
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 7.0e-93 344.4 207 77.8
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 1.3e-91 340.1 222 72.1
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 1.1e-90 337.0 230 70.0
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 2.5e-90 335.9 209 75.6
SHI10474 Sapria himalayana HOM05D004263 ORTHO05D004931 3.3e-90 335.5 222 69.8
BcaC05g25136 Brassica carinata HOM05D004263 ORTHO05D004931 4.3e-90 335.1 207 75.8
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 5.4e-85 318.2 225 62.7
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 9.2e-85 317.4 232 68.1
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 3.9e-83 312.0 233 67.0
Atru.chr6.3077 Acer truncatum HOM05D004263 ORTHO05D004931 1.1e-80 303.9 177 80.8
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 2.6e-79 299.3 177 77.4
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 3.4e-79 298.9 223 65.0
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 1.9e-77 293.1 231 59.7
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 2.4e-77 292.7 177 77.4
AagrBONN_evm.TU.Sc2ySwM_228.3812 Anthoceros agrestis HOM05D004263 ORTHO05D004931 1.4e-72 276.9 225 55.6
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 3.7e-70 268.9 225 51.1
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 1.0e-67 260.8 226 54.4
Cpa.g.sc34.89 Carica papaya HOM05D004263 ORTHO05D004931 2.3e-67 259.6 153 77.8
SMO239G0082 Selaginella moellendorffii HOM05D004263 ORTHO05D004931 3.9e-67 258.8 225 52.4
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 6.8e-64 248.1 184 62.5
Oeu001692.1 Olea europaea HOM05D004263 ORTHO05D004931 4.1e-61 238.8 147 75.5
Medtr8g471030 Medicago truncatula HOM05D004263 ORTHO05D004931 4.2e-53 212.2 127 73.2
CBR_g40703 Chara braunii HOM05D004263 ORTHO05D004931 6.3e-25 118.6 110 48.2
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 4.6e-20 102.4 59 78.0
Cfa022578 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.3e-14 84.3 174 32.2
Actinidia30490 Actinidia chinensis HOM05D004263 ORTHO05D004931 1.7e-14 84.0 59 66.1
arahy.Tifrunner.gnm1.ann1.J1BTWL Arachis hypogaea HOM05D004263 ORTHO05D004931 2.2e-14 83.6 103 44.7
SEGI_32704 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 2.1e-12 77.0 49 61.2
Cre07.g328550 Chlamydomonas reinhardtii HOM05D004263 ORTHO05D004931 9.7e-10 68.2 195 23.6


User provided reference genes

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