Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2101.1 Capsicum annuum HOM05D002496 ORTHO05D002787 4.5e-68 261.2 134 100.0
CAN.G2119.2 Capsicum annuum HOM05D002496 ORTHO05D002787 3.9e-35 151.8 95 85.3
CAN.G309.113 Capsicum annuum HOM05D002496 ORTHO05D002787 1.2e-31 140.2 92 83.7
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 1.2e-31 140.2 85 90.6
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 1.2e-31 140.2 85 90.6
CAN.G1833.6 Capsicum annuum HOM05D002496 ORTHO05D002787 2.6e-31 139.0 139 64.0
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 2.6e-31 139.0 85 89.4
CAN.G309.125 Capsicum annuum HOM05D002496 ORTHO05D002787 9.8e-31 137.1 85 88.2
CAN.G1703.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.2e-30 136.0 85 88.2
CAN.G1703.18 Capsicum annuum HOM05D002496 ORTHO05D002787 3.7e-30 135.2 85 88.2
CAN.G1579.14 Capsicum annuum HOM05D002496 ORTHO05D002787 1.9e-29 132.9 85 87.1
CAN.G1579.7 Capsicum annuum HOM05D002496 ORTHO05D002787 2.4e-29 132.5 99 73.7
CAN.G4338.1 Capsicum annuum HOM05D002496 ORTHO05D002787 5.4e-29 131.3 85 83.5
CAN.G1669.8 Capsicum annuum HOM05D002496 ORTHO05D002787 7.0e-29 131.0 85 84.7
CAN.G309.134 Capsicum annuum HOM05D002496 ORTHO05D002787 9.2e-29 130.6 85 84.7
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 1.6e-28 129.8 105 70.5
CAN.G575.132 Capsicum annuum HOM05D002496 ORTHO05D002787 3.5e-28 128.6 85 87.1
CAN.G2802.1 Capsicum annuum HOM05D002496 ORTHO05D002787 4.6e-28 128.3 82 85.4
CAN.G2026.1 Capsicum annuum HOM05D002496 ORTHO05D002787 6.0e-28 127.9 85 84.7
CAN.G2119.3 Capsicum annuum HOM05D002496 ORTHO05D002787 1.0e-27 127.1 103 73.8
CAN.G1751.12 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-27 126.7 85 84.7
CAN.G1353.19 Capsicum annuum HOM05D002496 ORTHO05D002787 8.6e-27 124.0 85 80.0
CAN.G309.146 Capsicum annuum HOM05D002496 ORTHO05D002787 1.1e-26 123.6 85 81.2
Dinv11478 Davidia involucrata HOM05D002496 ORTHO05D002787 3.3e-26 122.1 99 72.7
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 9.5e-26 120.6 99 70.7
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 9.5e-26 120.6 82 79.3
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 1.2e-25 120.2 99 70.7
CAN.G309.99 Capsicum annuum HOM05D002496 ORTHO05D002787 1.6e-25 119.8 80 82.5
CAN.G309.123 Capsicum annuum HOM05D002496 ORTHO05D002787 2.1e-25 119.4 85 76.5
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 3.6e-25 118.6 99 69.7
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 4.7e-25 118.2 101 68.3
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 1.8e-24 116.3 127 59.1
CAN.G1783.2 Capsicum annuum HOM05D002496 ORTHO05D002787 1.8e-24 116.3 78 84.6
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 3.1e-24 115.5 102 66.7
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 4.0e-24 115.2 127 59.1
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 5.2e-24 114.8 106 67.0
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 5.2e-24 114.8 99 68.7
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 8.9e-24 114.0 82 76.8
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 1.5e-23 113.2 105 65.7
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 3.4e-23 112.1 85 76.5
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 3.4e-23 112.1 85 76.5
Lj2A763T47 Lonicera japonica HOM05D002496 ORTHO05D002787 3.4e-23 112.1 92 72.8
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 4.4e-23 111.7 108 64.8
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 5.8e-23 111.3 99 67.7
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 7.5e-23 110.9 90 72.2
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 7.5e-23 110.9 90 72.2
CAN.G1579.2 Capsicum annuum HOM05D002518 ORTHO05D002630 9.8e-23 110.5 69 87.0
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 1.3e-22 110.2 99 67.7
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 1.7e-22 109.8 91 72.5
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 1.7e-22 109.8 99 65.7
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 2.2e-22 109.4 108 64.8
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 3.7e-22 108.6 91 68.1
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 3.7e-22 108.6 99 65.7
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 4.9e-22 108.2 108 63.9
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 4.9e-22 108.2 111 59.5
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 8.3e-22 107.5 110 61.8
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 8.3e-22 107.5 109 61.5
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 8.3e-22 107.5 122 55.7
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 1.4e-21 106.7 102 62.7
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 1.4e-21 106.7 91 69.2
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 1.4e-21 106.7 88 70.5
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 1.4e-21 106.7 108 63.9
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 1.4e-21 106.7 88 70.5
CAN.G309.130 Capsicum annuum HOM05D002496 ORTHO05D002787 1.9e-21 106.3 65 87.7
CAN.G134.148 Capsicum annuum HOM05D002048 ORTHO05D002146 2.4e-21 105.9 133 54.1
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 2.4e-21 105.9 74 77.0
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 3.2e-21 105.5 88 69.3
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 3.2e-21 105.5 109 62.4
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 4.1e-21 105.1 109 63.3
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 4.1e-21 105.1 109 62.4
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 5.4e-21 104.8 110 60.0
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 5.4e-21 104.8 110 60.0
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 5.4e-21 104.8 93 66.7
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 5.4e-21 104.8 88 69.3
Psat7g064160 Pisum sativum HOM05D002496 ORTHO05D002787 5.4e-21 104.8 88 69.3
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 5.4e-21 104.8 102 65.7
CAN.G309.100 Capsicum annuum HOM05D002496 ORTHO05D002787 7.1e-21 104.4 76 76.3
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 9.2e-21 104.0 91 68.1
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 1.2e-20 103.6 109 59.6
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 1.2e-20 103.6 88 69.3
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 1.2e-20 103.6 102 64.7
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.6e-20 103.2 93 66.7
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 1.6e-20 103.2 93 66.7
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 2.1e-20 102.8 91 68.1
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 2.1e-20 102.8 105 61.0
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 2.7e-20 102.4 107 62.6
CAN.G309.110 Capsicum annuum HOM05D002496 ORTHO05D002787 2.7e-20 102.4 84 70.2
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 2.7e-20 102.4 74 74.3
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 2.7e-20 102.4 102 60.8
CiPaw.14G137000 Carya illinoinensis HOM05D002496 ORTHO05D002787 4.6e-20 101.7 83 71.1
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 4.6e-20 101.7 108 59.3
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 4.6e-20 101.7 97 63.9
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 6.0e-20 101.3 110 60.9
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 6.0e-20 101.3 110 59.1
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 6.0e-20 101.3 93 65.6
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 6.0e-20 101.3 110 58.2
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 7.8e-20 100.9 74 75.7
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 1.7e-19 99.8 89 66.3
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 1.7e-19 99.8 101 59.4
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 2.3e-19 99.4 93 64.5
AUR62040902 Chenopodium quinoa HOM05D002496 ORTHO05D002787 2.3e-19 99.4 100 60.0
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 2.3e-19 99.4 91 65.9
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 2.3e-19 99.4 91 65.9
VMungo0251G3571 Vigna mungo HOM05D002496 ORTHO05D002787 2.3e-19 99.4 74 73.0
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 3.0e-19 99.0 110 60.0
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 3.0e-19 99.0 74 73.0
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 3.0e-19 99.0 74 73.0
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 3.0e-19 99.0 91 64.8
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 3.9e-19 98.6 110 59.1
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 3.9e-19 98.6 91 64.8
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 3.9e-19 98.6 99 63.6
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 3.9e-19 98.6 95 64.2
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 5.1e-19 98.2 91 64.8
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 6.6e-19 97.8 76 75.0
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 8.6e-19 97.4 128 55.5
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 1.1e-18 97.1 110 58.2
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 1.5e-18 96.7 78 67.9
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 1.9e-18 96.3 95 64.2
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 1.9e-18 96.3 110 57.3
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 1.9e-18 96.3 110 57.3
CAN.G309.114 Capsicum annuum HOM05D002496 ORTHO05D002787 1.9e-18 96.3 71 77.5
TWI34G0193 Tripterygium wilfordii HOM05D002496 ORTHO05D002787 1.9e-18 96.3 91 64.8
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 4.3e-18 95.1 91 62.6
BcaC08g43619 Brassica carinata HOM05D002496 ORTHO05D002787 7.3e-18 94.4 103 57.3
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 7.3e-18 94.4 103 57.3
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 7.3e-18 94.4 103 57.3
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 9.5e-18 94.0 73 72.6
CAN.G134.142 Capsicum annuum HOM05D002496 ORTHO05D002787 9.5e-18 94.0 54 90.7
CAN.G309.103 Capsicum annuum HOM05D002496 ORTHO05D002787 9.5e-18 94.0 55 90.9
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 1.2e-17 93.6 110 57.3
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 1.2e-17 93.6 110 57.3
CAN.G575.112 Capsicum annuum HOM05D002496 ORTHO05D002787 2.8e-17 92.4 132 52.3
CAN.G1353.22 Capsicum annuum HOM05D002496 ORTHO05D002787 8.1e-17 90.9 69 72.5
CDE02G0627 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 1.1e-16 90.5 76 67.1
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 1.8e-16 89.7 99 60.6
CAN.G2177.2 Capsicum annuum HOM05D002496 ORTHO05D002787 6.8e-16 87.8 55 85.5
CAN.G309.121 Capsicum annuum HOM05D002496 ORTHO05D002787 6.8e-16 87.8 59 79.7
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 3.4e-15 85.5 87 63.2
CAN.G134.139 Capsicum annuum HOM05D002496 ORTHO05D002787 7.6e-15 84.3 50 88.0
CAN.G1563.1 Capsicum annuum HOM05D002496 ORTHO05D002787 9.9e-15 84.0 58 77.6
CAN.G309.132 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-14 83.6 48 89.6
CAN.G134.151 Capsicum annuum HOM05D002496 ORTHO05D002787 4.9e-14 81.6 55 78.2
CAN.G309.143 Capsicum annuum HOM05D002496 ORTHO05D002630 4.9e-14 81.6 76 64.5
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 4.9e-14 81.6 76 67.1
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 2.4e-13 79.3 94 57.4
CAN.G1353.27 Capsicum annuum HOM05D002496 ORTHO05D002787 5.4e-13 78.2 55 74.5
CAN.G134.157 Capsicum annuum HOM05D002496 ORTHO05D002787 2.7e-12 75.9 53 79.2
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 6.0e-12 74.7 96 56.2
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 6.0e-12 74.7 96 56.2
Lsat_1_v5_gn_2_54100 Lactuca sativa HOM05D002496 ORTHO05D003550 7.8e-12 74.3 89 57.3
SHI31315 Sapria himalayana HOM05D002496 ORTHO05D002787 7.8e-12 74.3 62 74.2
SEGI_17528 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 1.0e-11 73.9 94 55.3
CAN.G2026.4 Capsicum annuum HOM05D002496 ORTHO05D002787 3.9e-11 72.0 46 82.6
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 3.9e-11 72.0 75 61.3
CAN.G134.146 Capsicum annuum HOM05D002518 ORTHO05D002630 6.6e-11 71.2 45 84.4
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 2.1e-09 66.2 115 41.7
arahy.Tifrunner.gnm1.ann1.WZQ8WP Arachis hypogaea HOM05D002496 ORTHO05D002787 2.1e-09 66.2 64 59.4
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 2.1e-09 66.2 75 57.3
CAN.G8.32 Capsicum annuum HOM05D002496 ORTHO05D002787 1.4e-08 63.5 56 67.9
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 6.8e-08 61.2 86 50.0
CAN.G743.3 Capsicum annuum HOM05D002496 ORTHO05D002787 5.8e-07 58.2 58 60.3
C03p92660 Brassica napus HOM05D002496 ORTHO05D002787 1.7e-06 56.6 60 60.0
CAN.G1353.3 Capsicum annuum HOM05D002496 ORTHO05D002787 8.4e-06 54.3 59 61.0


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