Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G208.27 Capsicum annuum HOM05D005735 ORTHO05D006547 5.5e-56 220.7 110 100.0
CAN.G229.30 Capsicum annuum HOM05D005735 ORTHO05D006547 1.4e-35 152.9 81 91.4
Solyc09g011300.3 Solanum lycopersicum HOM05D005735 ORTHO05D006547 2.1e-34 149.1 81 88.9
Sopen09g006020 Solanum pennellii HOM05D005735 ORTHO05D006547 4.6e-34 147.9 81 87.7
Peaxi162Scf00318g00510 Petunia axillaris HOM05D005735 ORTHO05D006547 2.3e-33 145.6 81 88.9
Actinidia13829 Actinidia chinensis HOM05D005735 ORTHO05D006547 3.9e-33 144.8 81 86.4
Nitab4.5_0000362g0060 Nicotiana tabacum HOM05D005735 ORTHO05D006547 6.6e-33 144.1 81 87.7
Nitab4.5_0006535g0030 Nicotiana tabacum HOM05D005735 ORTHO05D006547 6.6e-33 144.1 81 87.7
Dinv37132 Davidia involucrata HOM05D005735 ORTHO05D006547 8.6e-33 143.7 81 86.4
Hma1.2p1_0766F.1_g215130 Hydrangea macrophylla HOM05D005735 ORTHO05D006547 8.6e-33 143.7 81 86.4
Cc06_g02200 Coffea canephora HOM05D005735 ORTHO05D006547 1.9e-32 142.5 81 85.2
Dinv35555 Davidia involucrata HOM05D005735 ORTHO05D006547 4.3e-32 141.4 81 85.2
Nn2g13495 Nelumbo nucifera HOM05D005735 ORTHO05D006547 1.6e-31 139.4 81 84.0
COL.COLO4_14723 Corchorus olitorius HOM05D005735 ORTHO05D006547 2.1e-31 139.0 81 81.5
Hund27335 Selenicereus undatus HOM05D005735 ORTHO05D006547 2.1e-31 139.0 81 84.0
Sc01g0004650 Simmondsia chinensis HOM05D005735 ORTHO05D006547 2.1e-31 139.0 81 82.7
Actinidia29177 Actinidia chinensis HOM05D005735 ORTHO05D006547 3.6e-31 138.3 81 84.0
MSTRG.5635 Avicennia marina HOM05D005735 ORTHO05D006547 4.7e-31 137.9 81 81.5
Migut.J00281 Erythranthe guttata HOM05D005735 ORTHO05D006547 4.7e-31 137.9 81 81.5
Cfa017317 Carpinus fangiana HOM05D005735 ORTHO05D006547 6.2e-31 137.5 81 81.5
MBI14_g09010_MAGBIO Magnolia biondii HOM05D005735 ORTHO05D006547 6.2e-31 137.5 81 82.7
Prupe.6G262400 Prunus persica HOM05D005735 ORTHO05D006547 8.1e-31 137.1 80 82.5
AUR62004273 Chenopodium quinoa HOM05D005735 ORTHO05D006547 1.1e-30 136.7 81 81.5
AUR62033384 Chenopodium quinoa HOM05D005735 ORTHO05D006547 1.1e-30 136.7 81 81.5
Manes.09G096300 Manihot esculenta HOM05D005735 ORTHO05D006547 1.1e-30 136.7 81 82.7
Rhsim04G0162200 Rhododendron simsii HOM05D005735 ORTHO05D006547 1.1e-30 136.7 81 82.7
Thecc.05G031800 Theobroma cacao HOM05D005735 ORTHO05D006547 1.1e-30 136.7 81 81.5
EL10Ac1g00952 Beta vulgaris HOM05D005735 ORTHO05D006547 1.4e-30 136.3 81 80.2
Gohir.A09G153300 Gossypium hirsutum HOM05D005735 ORTHO05D006547 1.4e-30 136.3 81 81.5
Gohir.D09G149000 Gossypium hirsutum HOM05D005735 ORTHO05D006547 1.4e-30 136.3 81 81.5
Gorai.006G170200 Gossypium raimondii HOM05D005735 ORTHO05D006547 1.4e-30 136.3 81 81.5
Sabra06G0068800 Salix brachista HOM05D005735 ORTHO05D006547 1.8e-30 136.0 81 81.5
GSVIVG01034092001 Vitis vinifera HOM05D005735 ORTHO05D006547 1.8e-30 136.0 81 79.0
Hund16974 Selenicereus undatus HOM05D005735 ORTHO05D006547 3.1e-30 135.2 81 79.0
CiPaw.09G199400 Carya illinoinensis HOM05D005735 ORTHO05D006547 4.0e-30 134.8 81 79.0
CiPaw.10G148500 Carya illinoinensis HOM05D005735 ORTHO05D006547 4.0e-30 134.8 81 79.0
Potri.006G091000 Populus trichocarpa HOM05D005735 ORTHO05D006547 5.2e-30 134.4 81 80.2
CDE04G2966 Ceratophyllum demersum HOM05D005735 ORTHO05D006547 6.8e-30 134.0 80 82.5
CsaV3_4G025430 Cucumis sativus L. HOM05D005735 ORTHO05D006547 6.8e-30 134.0 81 77.8
MD04G1136300 Malus domestica HOM05D005735 ORTHO05D006547 6.8e-30 134.0 81 79.0
Duzib093G1348 Durio zibethinus HOM05D005735 ORTHO05D006547 8.9e-30 133.7 81 77.8
Glyma.01G099700 Glycine max HOM05D005735 ORTHO05D006547 8.9e-30 133.7 81 79.0
HanXRQChr06g0177411 Helianthus annuus HOM05D005735 ORTHO05D006547 8.9e-30 133.7 81 79.0
ClCG04G007800 Citrullus lanatus HOM05D005735 ORTHO05D006547 1.2e-29 133.3 83 74.7
MD12G1150800 Malus domestica HOM05D005735 ORTHO05D006547 1.2e-29 133.3 81 80.2
Ciclev10012178m.g Citrus clementina HOM05D005735 ORTHO05D006547 1.5e-29 132.9 81 76.5
MELO3C003165.2 Cucumis melo HOM05D005735 ORTHO05D006547 1.5e-29 132.9 81 76.5
Lalb_Chr22g0358651 Lupinus albus HOM05D005735 ORTHO05D006547 1.5e-29 132.9 81 80.2
TAR636G0229 Trochodendron aralioides HOM05D005735 ORTHO05D006547 1.5e-29 132.9 81 80.2
Atru.chr8.2067 Acer truncatum HOM05D005735 ORTHO05D006547 2.0e-29 132.5 81 80.2
ECA236G4371 Erigeron canadensis HOM05D005735 ORTHO05D006547 5.8e-29 131.0 81 77.8
Lj3g0007667 Lotus japonicus HOM05D005735 ORTHO05D006547 5.8e-29 131.0 81 77.8
TPR.G17885 Trifolium pratense HOM05D005735 ORTHO05D006547 5.8e-29 131.0 81 77.8
arahy.Tifrunner.gnm1.ann1.879M1U Arachis hypogaea HOM05D005735 ORTHO05D006547 7.5e-29 130.6 81 77.8
arahy.Tifrunner.gnm1.ann1.ECZP7J Arachis hypogaea HOM05D005735 ORTHO05D006547 7.5e-29 130.6 81 77.8
Migut.J00280 Erythranthe guttata HOM05D005735 ORTHO05D006547 9.9e-29 130.2 80 77.5
Medtr4g020090 Medicago truncatula HOM05D005735 ORTHO05D006547 9.9e-29 130.2 81 77.8
Glyma.03G069600 Glycine max HOM05D005735 ORTHO05D006547 1.3e-28 129.8 81 77.8
QL07p028744 Quercus lobata HOM05D005735 ORTHO05D006547 1.7e-28 129.4 81 77.8
FvH4_6g12970 Fragaria vesca HOM05D005735 ORTHO05D006547 2.2e-28 129.0 81 76.5
FAN05G2836 Fragaria x ananassa HOM05D005735 ORTHO05D006547 2.2e-28 129.0 81 76.5
PGR031G0186 Punica granatum HOM05D005735 ORTHO05D006547 2.2e-28 129.0 81 76.5
BcaC07g39745 Brassica carinata HOM05D000012 ORTHO05D002345 2.9e-28 128.6 81 75.3
BolC8t50518H Brassica oleracea HOM05D005735 ORTHO05D006547 2.9e-28 128.6 81 75.3
DCAR_028771 Daucus carota HOM05D005735 ORTHO05D006547 2.9e-28 128.6 81 74.1
Eucgr.B02718 Eucalyptus grandis HOM05D005735 ORTHO05D006547 2.9e-28 128.6 81 77.8
Phvul.010G015300 Phaseolus vulgaris HOM05D005735 ORTHO05D006547 2.9e-28 128.6 80 76.2
VMungo0331G1562 Vigna mungo HOM05D005735 ORTHO05D006547 2.9e-28 128.6 81 74.1
BcaB01g00229 Brassica carinata HOM05D005735 ORTHO05D006547 3.7e-28 128.3 81 74.1
BraA09t40153Z Brassica rapa HOM05D005735 ORTHO05D006547 3.7e-28 128.3 81 74.1
Lalb_Chr24g0401021 Lupinus albus HOM05D005735 ORTHO05D006547 4.9e-28 127.9 80 76.2
TWI77G0204 Tripterygium wilfordii HOM05D005735 ORTHO05D006547 4.9e-28 127.9 81 80.2
unitig_578.g15880 Utricularia gibba HOM05D005735 ORTHO05D006547 4.9e-28 127.9 81 76.5
Oeu001404.1 Olea europaea HOM05D005735 ORTHO05D006547 6.4e-28 127.5 81 75.3
Ca_20080_v3 Cicer arietinum L. HOM05D005735 ORTHO05D006547 8.3e-28 127.1 81 75.3
RcHm_v2.0_Chr3g0465081 Rosa chinensis HOM05D005735 ORTHO05D006547 8.3e-28 127.1 81 75.3
Cpa.g.sc56.31 Carica papaya HOM05D005735 ORTHO05D006547 1.1e-27 126.7 81 75.3
CSS0004316 Camellia sinensis var. sinensis HOM05D005735 ORTHO05D006547 1.4e-27 126.3 81 76.5
Lj2A88G66 Lonicera japonica HOM05D005735 ORTHO05D006547 1.9e-27 125.9 81 76.5
HanXRQChr04g0124581 Helianthus annuus HOM05D005735 ORTHO05D006547 2.4e-27 125.6 81 71.6
PSO513G0055 Papaver somniferum HOM05D005735 ORTHO05D006547 3.2e-27 125.2 81 74.1
FAN09G1978 Fragaria x ananassa HOM05D005735 ORTHO05D006547 4.1e-27 124.8 81 74.1
BcaC08g44651 Brassica carinata HOM05D005735 ORTHO05D006547 5.4e-27 124.4 81 70.4
C06p21670 Brassica napus HOM05D005735 ORTHO05D006547 5.4e-27 124.4 81 70.4
BolC6t37356H Brassica oleracea HOM05D005735 ORTHO05D006547 5.4e-27 124.4 81 70.4
Lsat_1_v5_gn_8_84641 Lactuca sativa HOM05D005735 ORTHO05D006547 7.1e-27 124.0 81 71.6
AL5G34880 Arabidopsis lyrata HOM05D005735 ORTHO05D006547 9.2e-27 123.6 81 70.4
AT3G53900 Arabidopsis thaliana HOM05D005735 ORTHO05D006547 9.2e-27 123.6 81 70.4
A07p21840 Brassica napus HOM05D005735 ORTHO05D006547 1.2e-26 123.2 81 70.4
CANSAT35G0868 Cannabis sativa HOM05D005735 ORTHO05D006547 1.2e-26 123.2 80 75.0
CANSAT35G1842 Cannabis sativa HOM05D005735 ORTHO05D006547 1.2e-26 123.2 80 75.0
Carub.0005s2048 Capsella rubella HOM05D005735 ORTHO05D006547 1.2e-26 123.2 81 70.4
Os05g0455700 Oryza sativa ssp. japonica HOM05D005735 ORTHO05D006547 1.2e-26 123.2 80 73.8
PSO339G4903 Papaver somniferum HOM05D005735 ORTHO05D006547 1.2e-26 123.2 81 72.8
Sp5g08500 Schrenkiella parvula HOM05D005735 ORTHO05D006547 1.2e-26 123.2 81 70.4
BcaB02g07762 Brassica carinata HOM05D005735 ORTHO05D006547 2.1e-26 122.5 81 70.4
BraA07t29866Z Brassica rapa HOM05D005735 ORTHO05D006547 2.1e-26 122.5 81 69.1
THA.LOC104805616 Tarenaya hassleriana HOM05D005735 ORTHO05D006547 2.1e-26 122.5 81 72.8
Thhalv10010595m.g Eutrema salsugineum HOM05D005735 ORTHO05D006547 2.7e-26 122.1 81 70.4
Psat7g240200 Pisum sativum HOM05D005735 ORTHO05D006547 2.7e-26 122.1 81 72.8
Aqoxy2G02353 Aquilegia oxysepala HOM05D005735 ORTHO05D006547 4.6e-26 121.3 80 73.8
CARHR163810 Cardamine hirsuta HOM05D005735 ORTHO05D006547 6.0e-26 120.9 81 69.1
ATR0559G328 Amborella trichopoda HOM05D005735 ORTHO05D006547 1.0e-25 120.2 80 72.5
HPP92_027961 Vanilla planifolia HOM05D005735 ORTHO05D006547 2.3e-25 119.0 80 71.2
Mapoly0035s0109 Marchantia polymorpha HOM05D005735 ORTHO05D006547 3.0e-25 118.6 80 68.8
Zm00001eb289550 Zea mays HOM05D005735 ORTHO05D006547 1.5e-24 116.3 80 68.8
Aa31sc27G110 Aethionema arabicum HOM05D005735 ORTHO05D006547 5.6e-24 114.4 81 66.7
FAN02G2999 Fragaria x ananassa HOM05D005735 ORTHO05D006547 5.6e-24 114.4 108 57.4
FAN14G2901 Fragaria x ananassa HOM05D005735 ORTHO05D006547 9.5e-24 113.6 110 56.4
Duzib128G0016 Durio zibethinus HOM05D005735 ORTHO05D006547 3.6e-23 111.7 111 55.9
SMO147G0009 Selaginella moellendorffii HOM05D005735 ORTHO05D006547 1.8e-22 109.4 80 63.8
Pp3c9_24300 Physcomitrium patens HOM05D005735 ORTHO05D006547 5.2e-22 107.8 80 67.5
Zm00001eb412190 Zea mays HOM05D005735 ORTHO05D006547 5.2e-22 107.8 81 59.3
Ah.05g175740 Amaranthus hybridus HOM05D005735 ORTHO05D006547 1.2e-21 106.7 81 66.7
vmacro08634 Vaccinium macrocarpon HOM05D005735 ORTHO05D006547 9.9e-21 103.6 58 86.2
Sed0015161 Sechium edule HOM05D005735 ORTHO05D006547 1.1e-19 100.1 59 74.6
DCAR_012131 Daucus carota HOM05D005735 ORTHO05D006547 5.4e-19 97.8 72 65.3
PRCOL_00001881 Prasinoderma coloniale HOM05D005735 ORTHO05D006547 2.7e-18 95.5 80 56.2
Haze_20854 Corylus avellana HOM05D005735 ORTHO05D006547 1.7e-17 92.8 81 64.2
Haze_20857 Corylus avellana HOM05D005735 ORTHO05D006547 1.7e-17 92.8 81 64.2
MCO15G321 Micromonas commoda HOM05D005735 ORTHO05D006547 5.6e-16 87.8 80 52.5
AagrBONN_evm.TU.Sc2ySwM_228.3184 Anthoceros agrestis HOM05D005735 ORTHO05D006547 6.9e-14 80.9 58 65.5
CBR_g17719 Chara braunii HOM05D005735 ORTHO05D006547 1.2e-13 80.1 81 45.7
Cre11.g467778 Chlamydomonas reinhardtii HOM05D005735 ORTHO05D006547 1.1e-11 73.6 80 50.0
SalBow1G2503 Salvia bowleyana HOM05D000666 ORTHO05D006547 6.0e-10 67.8 35 88.6
Cfa024484 Carpinus fangiana HOM05D001287 ORTHO05D001226 1.9e-08 62.8 79 36.7
Thecc.06G103800 Theobroma cacao HOM05D005735 ORTHO05D006547 2.5e-08 62.4 35 85.7
SGA_v2.0_scaffold75G24970 Striga asiatica HOM05D005735 ORTHO05D006547 4.3e-08 61.6 36 77.8
C08p29170 Brassica napus HOM05D005735 ORTHO05D006547 7.3e-08 60.8 46 60.9
A09p46850 Brassica napus HOM05D005735 ORTHO05D006547 1.6e-07 59.7 35 77.1


User provided reference genes

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