Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G190.6 Capsicum annuum HOM05D003145 ORTHO05D115723 1.2e-124 449.9 229 100.0
Dinv06577 Davidia involucrata HOM05D003145 ORTHO05D003586 8.6e-19 98.2 116 49.1
CAN.G485.1 Capsicum annuum HOM05D003145 ORTHO05D003586 3.3e-18 96.3 117 51.3
Actinidia02152 Actinidia chinensis HOM05D003145 ORTHO05D003586 1.2e-17 94.4 114 47.4
Ciclev10004301m.g Citrus clementina HOM05D003145 ORTHO05D003586 4.0e-16 89.4 110 48.2
Nitab4.5_0002211g0070 Nicotiana tabacum HOM05D003145 ORTHO05D003586 2.6e-15 86.7 116 48.3
CANSAT25G1244 Cannabis sativa HOM05D003145 ORTHO05D003586 4.4e-15 85.9 114 46.5
Lalb_Chr23g0277171 Lupinus albus HOM05D003145 ORTHO05D003586 7.6e-15 85.1 103 50.5
QL07p001538 Quercus lobata HOM05D003145 ORTHO05D003586 7.6e-15 85.1 114 44.7
RcHm_v2.0_Chr1g0374011 Rosa chinensis HOM05D003145 ORTHO05D003586 9.9e-15 84.7 105 48.6
TAR374G0068 Trochodendron aralioides HOM05D003145 ORTHO05D003586 1.3e-14 84.3 112 44.6
Thecc.03G152600 Theobroma cacao HOM05D003145 ORTHO05D003586 1.7e-14 84.0 116 43.1
CAN.G485.3 Capsicum annuum HOM05D003145 ORTHO05D003586 2.2e-14 83.6 114 48.2
Ca_12622_v3 Cicer arietinum L. HOM05D003145 ORTHO05D003586 8.4e-14 81.6 114 46.5
Sabra03G0074000 Salix brachista HOM05D003145 ORTHO05D003586 1.9e-13 80.5 121 43.0
Sed0018340 Sechium edule HOM05D003145 ORTHO05D003586 2.4e-13 80.1 114 43.9
ClCG07G016870 Citrullus lanatus HOM05D003145 ORTHO05D003586 3.2e-13 79.7 104 45.2
Nitab4.5_0003647g0050 Nicotiana tabacum HOM05D003145 ORTHO05D003586 3.2e-13 79.7 116 46.6
DCAR_006843 Daucus carota HOM05D003145 ORTHO05D003586 4.2e-13 79.3 113 48.7
Dinv21655 Davidia involucrata HOM05D003145 ORTHO05D003586 7.1e-13 78.6 114 44.7
CsaV3_4G004070 Cucumis sativus L. HOM05D003145 ORTHO05D003586 9.3e-13 78.2 115 42.6
Lalb_Chr01g0000271 Lupinus albus HOM05D003145 ORTHO05D003586 9.3e-13 78.2 96 50.0
Sed0023038 Sechium edule HOM05D003145 ORTHO05D003586 9.3e-13 78.2 115 43.5
MELO3C017657.2 Cucumis melo HOM05D003145 ORTHO05D003586 1.2e-12 77.8 115 42.6
TPR.G3659 Trifolium pratense HOM05D003145 ORTHO05D003586 1.2e-12 77.8 114 44.7
Solyc03g093350.4 Solanum lycopersicum HOM05D003145 ORTHO05D003586 2.1e-12 77.0 82 52.4
Peaxi162Scf00271g00086 Petunia axillaris HOM05D003145 ORTHO05D003586 6.0e-12 75.5 117 46.2
Medtr4g036415 Medicago truncatula HOM05D003145 ORTHO05D003586 1.3e-11 74.3 114 43.9
TAR503G0001 Trochodendron aralioides HOM05D003145 ORTHO05D003586 1.3e-11 74.3 114 42.1
TAR629G0158 Trochodendron aralioides HOM05D003145 ORTHO05D003586 1.3e-11 74.3 114 42.1
Rhsim11G0006900 Rhododendron simsii HOM05D003145 ORTHO05D003586 1.7e-11 73.9 114 42.1
CAN.G1530.4 Capsicum annuum HOM05D005636 ORTHO05D017742 5.1e-11 72.4 82 51.2
MD01G1181200 Malus domestica HOM05D003145 ORTHO05D003586 6.6e-11 72.0 131 41.2
Psat3g167200 Pisum sativum HOM05D003145 ORTHO05D003586 6.6e-11 72.0 116 39.7
Prupe.2G275100 Prunus persica HOM05D003145 ORTHO05D003586 8.7e-11 71.6 131 40.5
Sc03g0004080 Simmondsia chinensis HOM05D003145 ORTHO05D003586 1.1e-10 71.2 117 42.7
MD07G1251300 Malus domestica HOM05D003145 ORTHO05D003586 1.9e-10 70.5 115 41.7
PGSC0003DMG400007237 Solanum tuberosum HOM05D003145 ORTHO05D003586 1.9e-10 70.5 85 51.8
MSTRG.134 Avicennia marina HOM05D003145 ORTHO05D003586 3.3e-10 69.7 103 45.6
Actinidia13589 Actinidia chinensis HOM05D003145 ORTHO05D003586 5.6e-10 68.9 109 42.2
arahy.Tifrunner.gnm1.ann1.02BAGQ Arachis hypogaea HOM05D003145 ORTHO05D003586 7.3e-10 68.6 98 44.9
arahy.Tifrunner.gnm1.ann1.KJW9ZT Arachis hypogaea HOM05D003145 ORTHO05D003586 7.3e-10 68.6 98 44.9
CAN.G937.7 Capsicum annuum HOM05D003145 ORTHO05D003586 9.6e-10 68.2 76 51.3
Gohir.A09G249100 Gossypium hirsutum HOM05D003145 ORTHO05D003586 9.6e-10 68.2 119 37.8
VMungo1127G0410 Vigna mungo HOM05D003145 ORTHO05D003586 2.8e-09 66.6 71 50.7
Gohir.D09G250000 Gossypium hirsutum HOM05D003145 ORTHO05D003586 3.6e-09 66.2 119 37.8
Thhalv10012312m.g Eutrema salsugineum HOM05D003145 ORTHO05D003586 4.8e-09 65.9 104 41.3
Glyma.09G230800 Glycine max HOM05D003145 ORTHO05D003586 4.8e-09 65.9 71 50.7
Sopen03g024150 Solanum pennellii HOM05D003145 ORTHO05D003586 4.8e-09 65.9 79 48.1
Sopen05g030540 Solanum pennellii HOM05D003145 ORTHO05D003586 6.2e-09 65.5 73 52.1
Sopen05g030550 Solanum pennellii HOM05D003145 ORTHO05D003586 6.2e-09 65.5 73 52.1
Gorai.006G274400 Gossypium raimondii HOM05D003145 ORTHO05D003586 8.1e-09 65.1 119 37.0
Hma1.2p1_1132F.1_g260190 Hydrangea macrophylla HOM05D003145 ORTHO05D003586 1.4e-08 64.3 114 43.9
Manes.06G040900 Manihot esculenta HOM05D003145 ORTHO05D003586 1.4e-08 64.3 84 46.4
Atru.chr1.828 Acer truncatum HOM05D003145 ORTHO05D003586 1.8e-08 63.9 78 47.4
Oeu022466.1 Olea europaea HOM05D003145 ORTHO05D003586 1.8e-08 63.9 78 50.0
PSO781G0014 Papaver somniferum HOM05D003145 ORTHO05D003586 3.1e-08 63.2 114 39.5
Sp6g13500 Schrenkiella parvula HOM05D003145 ORTHO05D003586 4.0e-08 62.8 98 42.9
Glyma.12G005900 Glycine max HOM05D003145 ORTHO05D003586 5.3e-08 62.4 114 39.5
AL2G22290 Arabidopsis lyrata HOM05D003145 ORTHO05D003586 9.0e-08 61.6 100 40.0
Nn1g00938 Nelumbo nucifera HOM05D003145 ORTHO05D003586 9.0e-08 61.6 114 38.6
Carub.0008s1133 Capsella rubella HOM05D003145 ORTHO05D003586 1.5e-07 60.8 103 39.8
CiPaw.08G001500 Carya illinoinensis HOM05D003145 ORTHO05D003586 2.0e-07 60.5 122 36.1
vmacro00005 Vaccinium macrocarpon HOM05D003145 ORTHO05D003586 2.6e-07 60.1 105 39.0
CARHR009940 Cardamine hirsuta HOM05D003145 ORTHO05D003586 3.4e-07 59.7 103 40.8
FAN02G1498 Fragaria x ananassa HOM05D003145 ORTHO05D003586 3.4e-07 59.7 106 41.5
FAN05G5489 Fragaria x ananassa HOM05D003145 ORTHO05D003586 4.4e-07 59.3 106 40.6
Potri.003G107200 Populus trichocarpa HOM05D003145 ORTHO05D003586 4.4e-07 59.3 97 42.3
CSS0016680 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 5.8e-07 58.9 118 38.1
CSS0017778 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 5.8e-07 58.9 118 38.1
Potri.001G126400 Populus trichocarpa HOM05D003145 ORTHO05D003586 9.9e-07 58.2 106 40.6
Nitab4.5_0001358g0070 Nicotiana tabacum HOM05D003145 ORTHO05D003586 1.3e-06 57.8 58 53.4
Oeu042538.1 Olea europaea HOM05D003145 ORTHO05D003586 1.3e-06 57.8 87 44.8
PSO170G1839 Papaver somniferum HOM05D003145 ORTHO05D003586 1.7e-06 57.4 114 37.7
AUR62003728 Chenopodium quinoa HOM05D003145 ORTHO05D003586 2.9e-06 56.6 79 45.6
TWI23G0972 Tripterygium wilfordii HOM05D003145 ORTHO05D003586 2.9e-06 56.6 73 45.2
vmacro14067 Vaccinium macrocarpon HOM05D003145 ORTHO05D003586 3.8e-06 56.2 113 35.4
Cfa012923 Carpinus fangiana HOM05D003145 ORTHO05D003586 6.4e-06 55.5 71 46.5
CDE04G0452 Ceratophyllum demersum HOM05D003145 ORTHO05D003586 6.4e-06 55.5 106 34.9
EL10Ac6g15036 Beta vulgaris HOM05D003145 ORTHO05D003586 8.4e-06 55.1 101 37.6
RcHm_v2.0_Chr2g0137831 Rosa chinensis HOM05D003145 ORTHO05D003586 8.4e-06 55.1 100 39.0


User provided reference genes

Program Settings