Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G189.59 Capsicum annuum HOM05D000233 ORTHO05D115125 1.2e-77 293.1 152 100.0
CAN.G189.53 Capsicum annuum HOM05D000233 ORTHO05D000020 2.6e-64 248.8 149 87.9
CAN.G189.55 Capsicum annuum HOM05D000233 ORTHO05D000020 3.8e-55 218.4 139 84.9
CAN.G189.58 Capsicum annuum HOM05D000233 ORTHO05D115414 1.4e-49 199.9 152 72.4
CAN.G189.57 Capsicum annuum HOM05D000233 ORTHO05D011118 5.7e-43 177.9 150 66.7
CAN.G189.52 Capsicum annuum HOM05D000233 ORTHO05D000020 6.3e-26 121.3 85 76.5
Sopen03g002330 Solanum pennellii HOM05D000233 ORTHO05D000020 6.1e-13 78.2 161 42.2
Solyc03g006320.1 Solanum lycopersicum HOM05D000233 ORTHO05D000020 1.5e-11 73.6 163 41.1
CAN.G568.1 Capsicum annuum HOM05D000233 ORTHO05D115679 3.7e-10 68.9 153 40.5
Nitab4.5_0001375g0160 Nicotiana tabacum HOM05D000233 ORTHO05D000020 4.9e-10 68.6 177 36.2
Gorai.010G256600 Gossypium raimondii HOM05D000233 ORTHO05D000020 1.1e-09 67.4 180 37.2
TWI39G0756 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 3.2e-09 65.9 144 40.3
Gohir.D06G209900 Gossypium hirsutum HOM05D000233 ORTHO05D000020 7.0e-09 64.7 180 36.7
Peaxi162Scf00031g00144 Petunia axillaris HOM05D000233 ORTHO05D000020 2.7e-08 62.8 179 38.5
PGSC0003DMG400012828 Solanum tuberosum HOM05D000233 ORTHO05D000020 2.7e-08 62.8 170 38.8
Gohir.D09G073000 Gossypium hirsutum HOM05D000233 ORTHO05D000020 4.6e-08 62.0 184 32.1
Gohir.A06G211300 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.7e-07 60.1 178 36.5
Lsat_1_v5_gn_5_128280 Lactuca sativa HOM05D000233 ORTHO05D000020 2.3e-07 59.7 172 34.3
Nitab4.5_0000516g0110 Nicotiana tabacum HOM05D000233 ORTHO05D000020 2.3e-07 59.7 177 36.7
Carub.0003s1486 Capsella rubella HOM05D000233 ORTHO05D000020 5.0e-07 58.5 162 35.2
Lj8P108T38 Lonicera japonica HOM05D000233 ORTHO05D000020 5.0e-07 58.5 151 39.7
unitig_62.g23328 Utricularia gibba HOM05D000233 ORTHO05D000020 5.0e-07 58.5 39 69.2
Aa31LG8G2410 Aethionema arabicum HOM05D000233 ORTHO05D000020 6.6e-07 58.2 163 36.2
AL3G27600 Arabidopsis lyrata HOM05D000233 ORTHO05D000020 8.6e-07 57.8 161 36.0
ClCG03G008040 Citrullus lanatus HOM05D000233 ORTHO05D000020 8.6e-07 57.8 160 35.6
Oeu036076.1 Olea europaea HOM05D000233 ORTHO05D000020 8.6e-07 57.8 154 38.3
Actinidia35241 Actinidia chinensis HOM05D000233 ORTHO05D000020 1.1e-06 57.4 164 35.4
BcaC01g01363 Brassica carinata HOM05D000233 ORTHO05D000020 1.1e-06 57.4 158 34.8
CSS0025246 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 1.1e-06 57.4 191 34.0
Nitab4.5_0009794g0010 Nicotiana tabacum HOM05D000233 ORTHO05D000020 1.1e-06 57.4 192 35.4
TWI38G0114 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 1.1e-06 57.4 131 37.4
Duzib170G0085 Durio zibethinus HOM05D000233 ORTHO05D000020 1.5e-06 57.0 146 38.4
Hma1.2p1_1411F.1_g281750 Hydrangea macrophylla HOM05D000233 ORTHO05D000020 1.9e-06 56.6 171 32.7
BolC3t21433H Brassica oleracea HOM05D000233 ORTHO05D000020 2.5e-06 56.2 158 34.2
MELO3C002624.2 Cucumis melo HOM05D000233 ORTHO05D000020 2.5e-06 56.2 153 34.0
Glyma.12G162700 Glycine max HOM05D000233 ORTHO05D000020 3.3e-06 55.8 152 34.2
Sp3g13420 Schrenkiella parvula HOM05D000233 ORTHO05D000020 3.3e-06 55.8 160 36.9
GSVIVG01020584001 Vitis vinifera HOM05D000233 ORTHO05D000020 3.3e-06 55.8 159 35.2
AT3G15210 Arabidopsis thaliana HOM05D000233 ORTHO05D000020 4.3e-06 55.5 161 36.0
CDE06G1016 Ceratophyllum demersum HOM05D000233 ORTHO05D000020 4.3e-06 55.5 68 52.9
CsaV3_1G012520 Cucumis sativus L. HOM05D000233 ORTHO05D000020 4.3e-06 55.5 164 32.3
Thhalv10021456m.g Eutrema salsugineum HOM05D000233 ORTHO05D000020 4.3e-06 55.5 169 34.3
CiPaw.09G062700 Carya illinoinensis HOM05D000233 ORTHO05D000020 5.6e-06 55.1 179 35.8
COL.COLO4_36716 Corchorus olitorius HOM05D000233 ORTHO05D000020 5.6e-06 55.1 148 39.9
MELO3C007267.2 Cucumis melo HOM05D000233 ORTHO05D000020 5.6e-06 55.1 194 33.5
DCAR_013121 Daucus carota HOM05D000233 ORTHO05D000020 5.6e-06 55.1 158 33.5
Glyma.06G236400 Glycine max HOM05D000233 ORTHO05D000020 5.6e-06 55.1 148 34.5
Glyma.13G236500 Glycine max HOM05D000233 ORTHO05D000020 5.6e-06 55.1 168 35.7
Thecc.07G096000 Theobroma cacao HOM05D000233 ORTHO05D000020 5.6e-06 55.1 148 39.9
Lsat_1_v5_gn_7_104600 Lactuca sativa HOM05D000233 ORTHO05D000020 7.3e-06 54.7 170 30.6
Sed0003131 Sechium edule HOM05D000233 ORTHO05D000020 7.3e-06 54.7 161 34.8
Solyc10g009110.1 Solanum lycopersicum HOM05D000233 ORTHO05D000020 7.3e-06 54.7 175 34.9
TWI38G1607 Tripterygium wilfordii HOM05D000233 ORTHO05D000020 7.3e-06 54.7 185 32.4
Medtr2g014340 Medicago truncatula HOM05D000233 ORTHO05D000020 9.5e-06 54.3 159 32.7
Potri.001G397200 Populus trichocarpa HOM05D000233 ORTHO05D000020 9.5e-06 54.3 76 51.3
Sed0027869 Sechium edule HOM05D000233 ORTHO05D000020 9.5e-06 54.3 167 36.5


User provided reference genes

Program Settings