Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1841.1 Capsicum annuum HOM05D000176 ORTHO05D014553 5.0e-105 384.4 188 100.0
CAN.G650.30 Capsicum annuum HOM05D000176 ORTHO05D014553 5.4e-43 178.3 108 82.4
CAN.G1611.3 Capsicum annuum HOM05D000176 ORTHO05D014553 1.6e-42 176.8 108 84.3
CAN.G1218.17 Capsicum annuum HOM05D000176 ORTHO05D014553 3.6e-31 139.0 96 75.0
CAN.G1102.4 Capsicum annuum HOM05D000176 ORTHO05D014553 8.6e-25 117.9 125 58.4
PGSC0003DMG400027876 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.2e-21 107.5 104 62.5
CAN.G91.12 Capsicum annuum HOM05D000176 ORTHO05D014553 3.8e-20 102.4 108 62.0
PGSC0003DMG400041083 Solanum tuberosum HOM05D000176 ORTHO05D014553 8.4e-20 101.3 105 53.3
Sopen12g008340 Solanum pennellii HOM05D000176 ORTHO05D000106 6.0e-18 95.1 108 50.0
Solyc01g081584.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.0e-17 94.4 108 50.0
Sopen01g015170 Solanum pennellii HOM05D000176 ORTHO05D000106 3.0e-17 92.8 108 49.1
Solyc05g026520.2 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.9e-17 92.4 108 49.1
Solyc07g044815.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.1e-17 92.0 108 49.1
Sopen09g029870 Solanum pennellii HOM05D000176 ORTHO05D000106 8.7e-17 91.3 108 48.1
Solyc02g030462.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.1e-16 90.9 108 49.1
PGSC0003DMG400019874 Solanum tuberosum HOM05D000176 ORTHO05D014553 1.1e-16 90.9 85 63.5
Solyc07g019498.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 1.5e-16 90.5 107 48.6
Solyc08g150136.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.5e-16 89.7 108 48.1
Solyc10g049667.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.8e-15 85.5 109 45.9
CAN.G48.43 Capsicum annuum HOM05D001529 ORTHO05D014553 5.8e-13 78.6 66 71.2
CAN.G841.20 Capsicum annuum HOM05D000176 ORTHO05D014553 1.9e-11 73.6 58 65.5
Solyc09g150111.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 5.4e-11 72.0 61 59.0
PGSC0003DMG400010948 Solanum tuberosum HOM05D000176 ORTHO05D000106 5.4e-11 72.0 40 80.0
Solyc03g097550.3 Solanum lycopersicum HOM05D005705 ORTHO05D007152 7.1e-11 71.6 38 78.9
Sopen03g028300 Solanum pennellii HOM05D005705 ORTHO05D007152 7.1e-11 71.6 38 78.9
CAN.G732.1 Capsicum annuum HOM05D005705 ORTHO05D007152 9.3e-11 71.2 38 78.9
Sopen08g006090 Solanum pennellii HOM05D000176 ORTHO05D000106 1.6e-10 70.5 103 43.7
Nitab4.5_0003383g0010 Nicotiana tabacum HOM05D005705 ORTHO05D007152 2.1e-10 70.1 38 78.9
Solyc05g044513.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 4.6e-10 68.9 129 35.7
Sopen06g004480 Solanum pennellii HOM05D000176 ORTHO05D000106 4.6e-10 68.9 103 42.7
Sopen06g017070 Solanum pennellii HOM05D000176 ORTHO05D000106 4.6e-10 68.9 103 42.7
PGSC0003DMG400029935 Solanum tuberosum HOM05D000176 ORTHO05D000106 6.0e-10 68.6 112 45.5
Sopen06g015550 Solanum pennellii HOM05D000176 ORTHO05D014553 7.9e-10 68.2 103 42.7
Nitab4.5_0001332g0070 Nicotiana tabacum HOM05D005705 ORTHO05D007152 1.3e-09 67.4 38 76.3
Solyc07g019577.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.3e-09 67.4 57 59.6
Sopen09g010870 Solanum pennellii HOM05D000176 ORTHO05D000106 1.3e-09 67.4 107 41.1
HanXRQChr02g0034161 Helianthus annuus HOM05D005705 ORTHO05D007152 1.8e-09 67.0 38 68.4
Lsat_1_v5_gn_1_32681 Lactuca sativa HOM05D005705 ORTHO05D007152 1.8e-09 67.0 38 68.4
ECA247G2912 Erigeron canadensis HOM05D005705 ORTHO05D007152 2.3e-09 66.6 38 68.4
Cc08_g11650 Coffea canephora HOM05D005705 ORTHO05D007152 3.9e-09 65.9 38 68.4
Eucgr.K02687 Eucalyptus grandis HOM05D005705 ORTHO05D007152 3.9e-09 65.9 38 65.8
Solyc05g024385.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 3.9e-09 65.9 107 41.1
Peaxi162Scf00516g00214 Petunia axillaris HOM05D005705 ORTHO05D007152 5.1e-09 65.5 38 71.1
ECA247G0704 Erigeron canadensis HOM05D005705 ORTHO05D007152 8.7e-09 64.7 38 65.8
Nn4g22220 Nelumbo nucifera HOM05D005705 ORTHO05D007152 8.7e-09 64.7 38 65.8
Nn4g22223 Nelumbo nucifera HOM05D005705 ORTHO05D007152 8.7e-09 64.7 38 65.8
PGR083G0448 Punica granatum HOM05D005705 ORTHO05D007152 8.7e-09 64.7 62 45.2
Solyc02g065112.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 8.7e-09 64.7 107 40.2
Solyc06g050375.1 Solanum lycopersicum HOM05D000176 ORTHO05D014553 1.1e-08 64.3 103 41.7
Dinv11204 Davidia involucrata HOM05D005705 ORTHO05D007152 1.5e-08 63.9 40 65.0
Solyc12g056671.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 1.5e-08 63.9 103 39.8
Sopen03g009670 Solanum pennellii HOM05D000004 ORTHO05D014553 1.9e-08 63.5 59 57.6
Aqoxy3G01676 Aquilegia oxysepala HOM05D005705 ORTHO05D007152 2.5e-08 63.2 40 65.0
Gohir.A03G053840 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.5e-08 63.2 38 63.2
Gohir.D03G113075 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.5e-08 63.2 38 63.2
Gohir.D03G113100 Gossypium hirsutum HOM05D005705 ORTHO05D007152 2.5e-08 63.2 38 63.2
Gorai.003G119300 Gossypium raimondii HOM05D005705 ORTHO05D007152 2.5e-08 63.2 38 63.2
Solyc07g150135.1 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.5e-08 63.2 109 41.3
Atru.chr6.1874 Acer truncatum HOM05D005705 ORTHO05D007152 3.3e-08 62.8 38 60.5
CSS0038740 Camellia sinensis var. sinensis HOM05D005705 ORTHO05D007152 3.3e-08 62.8 67 43.3
CANSAT80G2532 Cannabis sativa HOM05D005705 ORTHO05D007152 3.3e-08 62.8 38 68.4
Ciclev10031733m.g Citrus clementina HOM05D005705 ORTHO05D007152 3.3e-08 62.8 38 68.4
Eucgr.K02692 Eucalyptus grandis HOM05D005705 ORTHO05D007152 3.3e-08 62.8 38 63.2
Potri.015G101300 Populus trichocarpa HOM05D005705 ORTHO05D007152 3.3e-08 62.8 40 60.0
Sopen12g020220 Solanum pennellii HOM05D000002 ORTHO05D000047 3.3e-08 62.8 109 38.5
Ah.11g046430 Amaranthus hybridus HOM05D005705 ORTHO05D007152 4.3e-08 62.4 38 65.8
CsaV3_1G000320 Cucumis sativus L. HOM05D005705 ORTHO05D007152 4.3e-08 62.4 38 68.4
Sabra15G0121700 Salix brachista HOM05D005705 ORTHO05D007152 4.3e-08 62.4 34 64.7
Thecc.03G135500 Theobroma cacao HOM05D005705 ORTHO05D007152 4.3e-08 62.4 38 65.8
AUR62029555 Chenopodium quinoa HOM05D005705 ORTHO05D007152 5.6e-08 62.0 38 63.2
AUR62034819 Chenopodium quinoa HOM05D005705 ORTHO05D007152 5.6e-08 62.0 38 63.2
Manes.06G123000 Manihot esculenta HOM05D005705 ORTHO05D007152 5.6e-08 62.0 82 40.2
Zm00001eb241970 Zea mays HOM05D005705 ORTHO05D007152 5.6e-08 62.0 38 63.2
Ca_16064_v3 Cicer arietinum L. HOM05D005705 ORTHO05D007152 7.4e-08 61.6 38 65.8
Sopen02g010890 Solanum pennellii HOM05D000004 ORTHO05D000002 7.4e-08 61.6 65 53.8
TPR.G35256 Trifolium pratense HOM05D005705 ORTHO05D007152 7.4e-08 61.6 38 65.8
MSTRG.4614 Avicennia marina HOM05D005705 ORTHO05D007152 9.6e-08 61.2 38 65.8
ClCG06G018130 Citrullus lanatus HOM05D005705 ORTHO05D007152 9.6e-08 61.2 38 65.8
DCAR_026236 Daucus carota HOM05D005705 ORTHO05D007152 9.6e-08 61.2 40 65.0
Duzib084G0308 Durio zibethinus HOM05D005705 ORTHO05D007152 9.6e-08 61.2 38 63.2
Hund10107 Selenicereus undatus HOM05D005705 ORTHO05D007152 9.6e-08 61.2 38 65.8
SGA_v2.0_scaffold37G14637 Striga asiatica HOM05D005705 ORTHO05D007152 9.6e-08 61.2 38 65.8
arahy.Tifrunner.gnm1.ann1.5ZS0BP Arachis hypogaea HOM05D005705 ORTHO05D007152 1.6e-07 60.5 38 63.2
arahy.Tifrunner.gnm1.ann1.U15GQW Arachis hypogaea HOM05D005705 ORTHO05D007152 1.6e-07 60.5 38 63.2
Migut.D01284 Erythranthe guttata HOM05D005705 ORTHO05D007152 1.6e-07 60.5 32 68.8
Phvul.009G162600 Phaseolus vulgaris HOM05D005705 ORTHO05D007152 1.6e-07 60.5 38 65.8
EL10Ac5g11353 Beta vulgaris HOM05D005705 ORTHO05D007152 2.1e-07 60.1 38 63.2
Eucgr.K02689 Eucalyptus grandis HOM05D005705 ORTHO05D007152 2.1e-07 60.1 37 62.2
Oeu061128.1 Olea europaea HOM05D005705 ORTHO05D007152 2.1e-07 60.1 38 63.2
GSVIVG01008591001 Vitis vinifera HOM05D005705 ORTHO05D007152 2.1e-07 60.1 38 57.9
ATR0582G303 Amborella trichopoda HOM05D005705 ORTHO05D007152 2.8e-07 59.7 38 63.2
Lj1g0017194 Lotus japonicus HOM05D005705 ORTHO05D007152 2.8e-07 59.7 38 63.2
Pp3c10_5680 Physcomitrium patens HOM05D005705 ORTHO05D007152 3.7e-07 59.3 41 53.7
Pp3c10_5730 Physcomitrium patens HOM05D005705 ORTHO05D007152 3.7e-07 59.3 41 53.7
Eucgr.K02697 Eucalyptus grandis HOM05D005705 ORTHO05D007152 4.8e-07 58.9 38 60.5
Glyma.06G167100 Glycine max HOM05D005705 ORTHO05D007152 4.8e-07 58.9 38 60.5
QL10p001835 Quercus lobata HOM05D005705 ORTHO05D007152 4.8e-07 58.9 38 63.2
VMungo1309G0782 Vigna mungo HOM05D005705 ORTHO05D007152 4.8e-07 58.9 38 57.9
Sed0013194 Sechium edule HOM05D005705 ORTHO05D007152 6.2e-07 58.5 38 65.8
Cpa.g.sc4.145 Carica papaya HOM05D005705 ORTHO05D007152 8.1e-07 58.2 40 57.5
Psat5g053040 Pisum sativum HOM05D005705 ORTHO05D007152 8.1e-07 58.2 38 60.5
THA.LOC104811568 Tarenaya hassleriana HOM05D005705 ORTHO05D007152 8.1e-07 58.2 38 63.2
Medtr3g098940 Medicago truncatula HOM05D005705 ORTHO05D007152 1.4e-06 57.4 38 60.5
CiPaw.11G003500 Carya illinoinensis HOM05D005705 ORTHO05D007152 1.8e-06 57.0 32 62.5
Lalb_Chr08g0237371 Lupinus albus HOM05D005705 ORTHO05D007152 1.8e-06 57.0 38 60.5
Aa31LG3G7650 Aethionema arabicum HOM05D005705 ORTHO05D007152 3.1e-06 56.2 38 63.2
HPP92_015136 Vanilla planifolia HOM05D005705 ORTHO05D007152 3.1e-06 56.2 32 62.5
Eucgr.F01610 Eucalyptus grandis HOM05D005705 ORTHO05D007152 5.3e-06 55.5 38 57.9
TWI14G0152 Tripterygium wilfordii HOM05D005705 ORTHO05D007152 5.3e-06 55.5 38 57.9
FAN08G2466 Fragaria x ananassa HOM05D005705 ORTHO05D007152 6.9e-06 55.1 32 59.4
FAN13G0195 Fragaria x ananassa HOM05D005705 ORTHO05D007152 6.9e-06 55.1 32 59.4
FAN18G0862 Fragaria x ananassa HOM05D005705 ORTHO05D007152 6.9e-06 55.1 32 59.4
PGSC0003DMG400021588 Solanum tuberosum HOM05D000176 ORTHO05D000106 6.9e-06 55.1 101 43.6


User provided reference genes

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