Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1783.5 Capsicum annuum HOM05D002496 ORTHO05D002787 6.9e-101 370.5 174 100.0
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 1.5e-95 352.8 174 95.4
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 1.5e-95 352.8 174 95.4
PGSC0003DMG400004280 Solanum tuberosum HOM05D002496 ORTHO05D002787 1.5e-95 352.8 174 95.4
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 1.3e-94 349.7 174 94.3
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 3.1e-93 345.1 174 92.0
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 4.0e-93 344.7 170 94.1
CAN.G1751.13 Capsicum annuum HOM05D002496 ORTHO05D002787 6.9e-93 344.0 174 93.1
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 2.6e-92 342.0 174 90.8
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 3.4e-92 341.7 174 90.2
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 7.6e-92 340.5 174 89.7
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 7.6e-92 340.5 174 89.7
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 7.6e-92 340.5 174 89.7
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 9.9e-92 340.1 174 90.2
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 1.3e-91 339.7 174 90.2
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 1.3e-91 339.7 174 90.2
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 2.2e-91 339.0 174 90.8
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 2.2e-91 339.0 174 89.7
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 2.2e-91 339.0 174 89.7
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 2.2e-91 339.0 174 89.7
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 2.2e-91 339.0 174 89.7
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 2.9e-91 338.6 174 89.7
FvH4_3g45670 Fragaria vesca HOM05D002496 ORTHO05D002787 2.9e-91 338.6 173 89.6
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 2.9e-91 338.6 173 89.6
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 1.1e-90 336.7 174 89.1
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 1.1e-90 336.7 174 89.1
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 1.4e-90 336.3 174 89.7
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 1.4e-90 336.3 174 88.5
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 1.4e-90 336.3 174 89.7
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 1.9e-90 335.9 174 89.1
Dinv11477 Davidia involucrata HOM05D002496 ORTHO05D002787 1.9e-90 335.9 174 89.7
Lj2A763G36 Lonicera japonica HOM05D002496 ORTHO05D002787 1.9e-90 335.9 174 89.1
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 1.9e-90 335.9 174 88.5
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 1.9e-90 335.9 173 89.0
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 2.4e-90 335.5 174 89.7
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 2.4e-90 335.5 174 89.1
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 2.4e-90 335.5 174 88.5
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 2.4e-90 335.5 174 88.5
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 3.2e-90 335.1 174 87.9
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 3.2e-90 335.1 174 88.5
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 4.2e-90 334.7 174 89.1
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 4.2e-90 334.7 174 89.1
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 4.2e-90 334.7 174 88.5
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 5.4e-90 334.3 174 87.9
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 5.4e-90 334.3 174 87.4
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 5.4e-90 334.3 174 88.5
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 5.4e-90 334.3 174 87.4
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 7.1e-90 334.0 174 88.5
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 7.1e-90 334.0 174 89.1
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 9.3e-90 333.6 174 88.5
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 9.3e-90 333.6 174 88.5
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 9.3e-90 333.6 174 88.5
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 9.3e-90 333.6 171 89.5
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 1.2e-89 333.2 174 87.9
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 1.2e-89 333.2 174 87.9
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 1.2e-89 333.2 174 88.5
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 1.6e-89 332.8 174 87.4
Hma1.2p1_0241F.1_g100580 Hydrangea macrophylla HOM05D002496 ORTHO05D002787 2.1e-89 332.4 174 87.9
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 2.1e-89 332.4 174 87.9
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 2.7e-89 332.0 174 87.4
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 3.5e-89 331.6 174 89.1
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 4.6e-89 331.3 174 86.2
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 4.6e-89 331.3 174 88.5
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 1.8e-88 329.3 174 86.2
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 2.3e-88 328.9 174 86.2
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 2.3e-88 328.9 173 87.9
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 5.1e-88 327.8 174 87.4
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 8.7e-88 327.0 174 87.4
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 1.1e-87 326.6 174 87.9
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 1.9e-87 325.9 174 85.6
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 1.9e-87 325.9 161 92.5
Psat7g063600 Pisum sativum HOM05D002496 ORTHO05D002787 3.3e-87 325.1 174 85.1
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 4.3e-87 324.7 174 86.8
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 5.6e-87 324.3 174 85.6
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 7.4e-87 323.9 174 85.1
Ca_17843_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 7.4e-87 323.9 174 85.1
VMungo0251G1507 Vigna mungo HOM05D002496 ORTHO05D002787 7.4e-87 323.9 174 85.1
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 9.6e-87 323.6 174 86.8
AUR62040903 Chenopodium quinoa HOM05D002496 ORTHO05D002787 9.6e-87 323.6 174 86.8
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 9.6e-87 323.6 174 84.5
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 1.3e-86 323.2 174 86.2
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 1.3e-86 323.2 174 86.2
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 1.6e-86 322.8 174 84.5
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 2.8e-86 322.0 174 84.5
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 3.7e-86 321.6 172 85.5
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 4.8e-86 321.2 174 85.1
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 4.8e-86 321.2 174 85.1
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 4.8e-86 321.2 174 85.6
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 6.2e-86 320.9 174 84.5
BcaC08g43618 Brassica carinata HOM05D002496 ORTHO05D002787 6.2e-86 320.9 174 85.6
CAN.G2119.1 Capsicum annuum HOM05D002496 ORTHO05D002787 1.4e-85 319.7 174 87.9
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 1.4e-85 319.7 174 85.6
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 3.1e-85 318.5 174 85.1
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 3.1e-85 318.5 174 85.1
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 3.1e-85 318.5 174 85.1
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 3.1e-85 318.5 174 85.1
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 4.0e-85 318.2 174 84.5
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 9.0e-85 317.0 174 82.8
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 2.6e-84 315.5 174 83.9
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 3.4e-84 315.1 174 84.5
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 3.4e-84 315.1 174 83.3
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 5.8e-84 314.3 174 83.9
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 5.8e-84 314.3 174 82.8
CDE02G1358 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 2.2e-83 312.4 172 82.6
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 1.8e-80 302.8 174 82.8
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 8.7e-80 300.4 153 91.5
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 2.6e-76 288.9 153 88.9
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 1.3e-72 276.6 175 73.7
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 1.3e-72 276.6 175 73.7
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 1.1e-71 273.5 144 86.1
SEGI_26512 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 1.5e-71 273.1 175 75.4
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 1.3e-70 270.0 134 91.0
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 4.1e-69 265.0 175 69.7
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 9.0e-69 263.8 175 69.7
CAN.G1669.10 Capsicum annuum HOM05D002496 ORTHO05D002787 2.0e-68 262.7 142 88.0
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 2.2e-67 259.2 175 69.1
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 2.9e-67 258.8 175 67.4
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 6.7e-64 247.7 138 81.2
FAN25G1480 Fragaria x ananassa HOM05D002496 ORTHO05D002787 3.7e-54 215.3 115 84.3
CBR_g23680 Chara braunii HOM05D002496 ORTHO05D002787 8.8e-48 194.1 173 50.9
CAN.G1669.5 Capsicum annuum HOM05D002496 ORTHO05D002787 9.7e-47 190.7 102 90.2
CiPaw.14G136900 Carya illinoinensis HOM05D002496 ORTHO05D002787 2.5e-34 149.4 80 80.0
FAN21G2381 Fragaria x ananassa HOM05D002496 ORTHO05D002787 2.4e-29 132.9 71 78.9
FAN11G3798 Fragaria x ananassa HOM05D002496 ORTHO05D002787 5.0e-19 98.6 45 86.7
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 4.4e-15 85.5 107 48.6


User provided reference genes

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