Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1751.13 Capsicum annuum HOM05D002496 ORTHO05D002787 9.5e-261 902.9 430 100.0
PGSC0003DMG400004280 Solanum tuberosum HOM05D002496 ORTHO05D002787 6.0e-215 750.7 398 91.2
CAN.G2119.1 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-214 749.6 417 87.8
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 1.3e-214 749.6 398 91.0
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 5.1e-214 747.7 398 91.0
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 6.2e-212 740.7 398 90.2
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 3.4e-210 734.9 394 89.8
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 7.1e-208 727.2 398 86.9
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 7.1e-208 727.2 398 86.7
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 9.3e-208 726.9 398 86.7
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 9.3e-208 726.9 398 86.7
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 1.2e-207 726.5 397 86.6
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 1.2e-207 726.5 398 87.2
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 2.7e-207 725.3 398 87.2
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 6.0e-207 724.2 398 86.9
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 6.0e-207 724.2 398 86.7
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 7.9e-207 723.8 398 86.7
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 1.0e-206 723.4 398 86.2
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 1.0e-206 723.4 398 86.4
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 1.8e-206 722.6 398 85.9
Lj2A763G36 Lonicera japonica HOM05D002496 ORTHO05D002787 2.3e-206 722.2 398 86.4
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 3.0e-206 721.8 398 86.2
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 3.0e-206 721.8 398 86.2
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 3.0e-206 721.8 398 86.4
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 5.1e-206 721.1 398 86.4
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 5.1e-206 721.1 398 86.2
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 6.7e-206 720.7 398 86.4
Hma1.2p1_0241F.1_g100580 Hydrangea macrophylla HOM05D002496 ORTHO05D002787 6.7e-206 720.7 398 86.2
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 8.7e-206 720.3 398 86.4
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 8.7e-206 720.3 398 85.4
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 8.7e-206 720.3 398 85.4
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.1e-205 719.9 398 85.9
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 1.9e-205 719.2 398 86.2
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 1.9e-205 719.2 398 85.7
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 1.9e-205 719.2 398 85.7
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 1.9e-205 719.2 398 86.2
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 2.5e-205 718.8 398 85.4
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 2.5e-205 718.8 398 86.2
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 2.5e-205 718.8 398 85.2
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 3.3e-205 718.4 398 85.9
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 5.6e-205 717.6 398 85.9
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 5.6e-205 717.6 398 85.9
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 5.6e-205 717.6 398 85.9
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 7.4e-205 717.2 398 85.9
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 7.4e-205 717.2 398 86.4
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 2.1e-204 715.7 398 85.9
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 3.7e-204 714.9 398 85.4
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 4.8e-204 714.5 398 84.9
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 4.8e-204 714.5 398 84.7
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 6.2e-204 714.1 398 84.9
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 8.2e-204 713.8 400 85.8
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 1.1e-203 713.4 398 85.7
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 1.8e-203 712.6 398 85.2
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 1.8e-203 712.6 398 85.2
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 2.4e-203 712.2 398 84.9
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 2.4e-203 712.2 385 87.8
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 2.4e-203 712.2 398 85.2
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 3.1e-203 711.8 398 84.7
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 4.0e-203 711.4 398 84.9
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 6.9e-203 710.7 398 84.9
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 6.9e-203 710.7 398 84.4
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 2.0e-202 709.1 398 85.2
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 2.6e-202 708.8 398 84.4
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 2.6e-202 708.8 397 85.1
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 2.6e-202 708.8 398 84.4
VMungo0251G1507 Vigna mungo HOM05D002496 ORTHO05D002787 2.6e-202 708.8 398 84.2
BcaC08g43618 Brassica carinata HOM05D002496 ORTHO05D002787 4.5e-202 708.0 398 84.2
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 7.6e-202 707.2 398 84.7
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 1.3e-201 706.4 398 84.2
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 1.7e-201 706.1 398 83.7
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 2.2e-201 705.7 398 83.9
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 2.2e-201 705.7 398 83.9
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 2.2e-201 705.7 398 83.9
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 2.2e-201 705.7 398 83.7
Ca_17843_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 2.2e-201 705.7 398 83.7
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 2.9e-201 705.3 398 83.7
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 4.9e-201 704.5 398 83.7
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 1.4e-200 703.0 398 84.2
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 1.9e-200 702.6 447 77.4
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 2.5e-200 702.2 398 83.7
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 2.5e-200 702.2 398 83.4
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 2.5e-200 702.2 398 83.4
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 4.2e-200 701.4 398 84.2
AUR62040903 Chenopodium quinoa HOM05D002496 ORTHO05D002787 4.2e-200 701.4 398 84.2
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 4.2e-200 701.4 398 83.4
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 4.2e-200 701.4 398 83.7
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 5.5e-200 701.0 398 83.4
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 5.5e-200 701.0 408 81.9
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 5.5e-200 701.0 408 81.9
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 7.1e-200 700.7 398 84.7
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 1.2e-199 699.9 398 83.4
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 1.6e-199 699.5 398 82.9
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 1.6e-199 699.5 398 84.7
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 2.1e-199 699.1 398 82.7
Psat7g063600 Pisum sativum HOM05D002496 ORTHO05D002787 2.7e-199 698.7 398 83.2
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 2.3e-198 695.7 396 83.6
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 6.7e-198 694.1 398 83.2
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 3.3e-197 691.8 398 82.9
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 5.7e-197 691.0 398 81.4
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 7.4e-197 690.6 398 82.4
CDE02G1358 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 1.3e-196 689.9 396 82.1
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 3.1e-195 685.3 379 87.6
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 5.3e-195 684.5 398 82.7
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 1.3e-185 653.3 368 84.2
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 1.7e-185 652.9 358 86.6
SEGI_26512 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 1.2e-183 646.7 399 78.2
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 5.7e-181 637.9 399 76.4
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 5.7e-181 637.9 399 76.4
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 1.9e-176 622.9 399 73.4
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 6.1e-175 617.8 399 73.2
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 1.1e-173 613.6 399 73.7
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.2e-172 609.4 336 87.5
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 3.5e-170 602.1 399 70.9
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 5.7e-165 584.7 364 78.0
FvH4_3g45670 Fragaria vesca HOM05D002496 ORTHO05D002787 9.1e-163 577.4 322 84.5
CAN.G1669.10 Capsicum annuum HOM05D002496 ORTHO05D002787 9.8e-149 530.8 322 80.7
CBR_g23680 Chara braunii HOM05D002496 ORTHO05D002787 4.7e-143 511.9 397 60.2
FAN25G1480 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.5e-112 410.6 224 85.3
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 2.5e-112 409.8 240 82.1
FAN11G3798 Fragaria x ananassa HOM05D002496 ORTHO05D002787 3.5e-106 389.4 225 80.4
CAN.G1783.6 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-103 380.9 220 84.5
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 3.4e-101 372.9 217 83.9
FvH4_3g45640 Fragaria vesca HOM05D002496 ORTHO05D002787 3.8e-100 369.4 220 81.4
Dinv11477 Davidia involucrata HOM05D002496 ORTHO05D002787 6.7e-97 358.6 184 90.2
CiPaw.14G136900 Carya illinoinensis HOM05D002496 ORTHO05D002787 1.4e-94 350.9 189 83.6
CAN.G1783.5 Capsicum annuum HOM05D002496 ORTHO05D002787 6.5e-92 342.0 174 93.1
CAN.G1669.5 Capsicum annuum HOM05D002496 ORTHO05D002787 4.3e-88 329.3 351 55.3
FAN11G2291 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.7e-84 317.4 204 75.5
Manes.15G109101 Manihot esculenta HOM05D002496 ORTHO05D000252 1.6e-50 204.5 119 84.0
FAN04G0904 Fragaria x ananassa HOM05D002496 ORTHO05D002787 1.7e-47 194.5 102 88.2
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 4.9e-39 166.4 146 59.6
CBR_g39746 Chara braunii HOM05D002496 ORTHO05D002787 3.0e-33 147.1 450 29.3
FAN21G2381 Fragaria x ananassa HOM05D002496 ORTHO05D002787 5.7e-32 142.9 101 66.3
CBR_g37133 Chara braunii HOM05D002496 ORTHO05D002787 2.2e-31 141.0 247 33.6
Cre02.g112250 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 9.5e-27 125.6 271 30.6
Cre02.g112300 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 4.7e-26 123.2 283 29.7
Cre10.g448850 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 8.9e-25 119.0 479 25.7
CBR_g23253 Chara braunii HOM05D002496 ORTHO05D002787 4.9e-23 113.2 196 36.2
HPP92_024697 Vanilla planifolia HOM05D002496 ORTHO05D002787 1.7e-20 104.8 184 39.1
MCO07G349 Micromonas commoda HOM05D002496 ORTHO05D002787 5.6e-19 99.8 299 26.4
CBR_g38074 Chara braunii HOM05D007859 ORTHO05D002787 2.1e-18 97.8 232 30.6
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 3.6e-18 97.1 134 45.5
CAN.G2026.4 Capsicum annuum HOM05D002496 ORTHO05D002787 2.9e-15 87.4 44 90.9
MCO16G075 Micromonas commoda HOM05D002496 ORTHO05D002787 3.5e-13 80.5 126 38.1
MCO05G112 Micromonas commoda HOM05D002496 ORTHO05D002787 7.8e-13 79.3 89 42.7
PRCOL_00006516 Prasinoderma coloniale HOM05D002496 ORTHO05D002787 3.0e-12 77.4 181 28.2
CBR_g38075 Chara braunii HOM05D000019 ORTHO05D002787 8.6e-12 75.9 233 28.8
MCO11G888 Micromonas commoda HOM05D002496 ORTHO05D002787 7.3e-11 72.8 122 32.8
C03p92650 Brassica napus HOM05D002496 ORTHO05D002787 1.2e-10 72.0 33 84.8
FvH4_3g45710 Fragaria vesca HOM05D002496 ORTHO05D002787 1.2e-10 72.0 34 79.4
MCO09G147 Micromonas commoda HOM05D002496 ORTHO05D002787 2.0e-08 64.7 118 33.1
Cre17.g728300 Chlamydomonas reinhardtii HOM05D002496 ORTHO05D002787 5.4e-06 56.6 61 44.3


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