Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 0.0e+00 1320.1 703 100.0
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 0.0e+00 1184.1 703 89.8
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 0.0e+00 1169.8 701 89.0
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 0.0e+00 1137.1 702 85.8
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 0.0e+00 1110.5 703 84.2
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 0.0e+00 1100.5 703 83.8
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 0.0e+00 1075.1 636 89.8
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 3.4e-191 672.5 704 53.4
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 5.1e-179 632.1 703 51.4
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 1.2e-175 620.9 706 51.3
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 1.3e-169 600.9 705 52.1
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 4.8e-169 599.0 690 50.4
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 6.3e-169 598.6 704 53.3
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 2.3e-163 580.1 712 49.4
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.5e-159 567.4 699 50.4
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 6.3e-153 545.4 707 47.5
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.1e-152 543.1 705 47.2
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 4.5e-151 539.3 705 47.0
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.5e-146 524.2 699 46.4
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 2.6e-146 523.5 706 46.6
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 8.2e-145 518.5 706 46.2
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 2.8e-137 493.4 710 45.4
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 6.3e-137 492.3 707 44.4
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.1e-136 491.5 707 45.4
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 2.4e-136 490.3 707 45.3
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 2.9e-134 483.4 705 44.7
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 6.5e-134 482.3 705 44.4
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 9.4e-133 478.4 690 45.9
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 3.0e-131 473.4 697 44.2
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.4e-128 464.5 690 45.4
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 4.4e-122 443.0 685 42.5
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 4.9e-121 439.5 708 41.1
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 1.8e-120 437.6 703 42.7
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.8e-120 437.6 700 41.6
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 1.6e-119 434.5 715 41.8
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 3.0e-115 420.2 470 53.6
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 7.5e-114 415.6 701 40.9
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 6.4e-113 412.5 705 41.0
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.6e-111 407.9 748 38.1
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 3.0e-110 403.7 748 37.4
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 3.9e-110 403.3 705 39.6
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.2e-108 398.3 697 40.9
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 2.8e-108 397.1 703 39.7
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.3e-107 394.0 705 39.9
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 8.9e-107 392.1 700 39.3
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 7.5e-106 389.0 725 39.2
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 4.6e-103 379.8 642 42.4
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 1.3e-102 378.3 687 40.3
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 8.6e-102 375.6 698 38.0
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.5e-101 374.8 709 38.6
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 2.8e-100 370.5 689 37.2
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 4.7e-100 369.8 703 37.4
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 6.2e-100 369.4 703 39.3
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 8.9e-99 365.5 706 38.5
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 3.4e-98 363.6 313 61.0
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 5.8e-98 362.8 703 36.3
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 7.5e-98 362.5 628 41.1
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 4.9e-97 359.8 670 39.3
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 7.8e-95 352.4 696 37.9
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 2.3e-94 350.9 695 38.8
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.1e-93 348.6 477 49.1
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 1.6e-92 344.7 692 37.4
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 4.7e-92 343.2 718 37.2
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 1.8e-91 341.3 710 36.9
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.1e-91 340.5 540 43.0
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 6.8e-91 339.3 365 55.1
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 1.5e-90 338.2 705 38.9
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 1.5e-90 338.2 518 44.4
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.9e-89 334.0 713 36.5
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.4e-88 331.6 652 36.0
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 1.6e-87 328.2 541 41.0
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 2.3e-86 324.3 702 36.0
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 3.9e-86 323.6 694 36.6
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.2e-82 312.0 706 34.3
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 2.6e-82 310.8 703 33.4
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 9.9e-82 308.9 724 34.7
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.1e-79 301.2 634 36.4
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.5e-77 295.0 693 35.2
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 1.5e-77 295.0 692 36.1
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 3.1e-75 287.3 693 34.1
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 5.8e-74 283.1 725 33.0
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 2.9e-73 280.8 373 46.6
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.1e-72 278.9 721 32.7
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 7.1e-72 276.2 419 42.0
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 1.3e-70 271.9 691 34.0
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 1.8e-70 271.6 691 34.0
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 4.3e-69 266.9 703 34.1
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 4.3e-69 266.9 703 34.1
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 4.3e-69 266.9 703 34.1
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 9.6e-69 265.8 467 41.3
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.8e-67 261.5 323 47.7
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 9.0e-67 259.2 256 54.7
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 1.3e-65 255.4 425 41.4
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 3.8e-65 253.8 494 39.5
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 8.4e-65 252.7 473 38.1
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 5.5e-64 250.0 232 59.5
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 5.5e-64 250.0 423 39.5
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 1.0e-62 245.7 530 35.5
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 5.1e-62 243.4 315 46.7
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 6.7e-62 243.0 719 31.7
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 2.8e-60 237.7 412 40.3
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 1.2e-58 232.3 732 31.6
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 5.8e-58 229.9 480 38.8
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 8.4e-57 226.1 516 37.2
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 2.5e-56 224.6 255 51.0
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 6.0e-55 219.9 731 33.9
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 2.3e-54 218.0 464 37.1
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 1.1e-51 209.1 309 42.7
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.3e-49 202.2 413 37.8
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.1e-45 189.1 201 53.2
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 3.1e-43 181.0 129 69.8
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 1.6e-39 168.7 134 62.7
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 1.7e-36 158.7 213 47.9
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.8e-35 155.2 316 39.2
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 1.4e-32 145.6 358 32.7
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 2.5e-32 144.8 758 26.0
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 4.1e-27 127.5 178 44.4
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 2.1e-23 115.2 351 31.9
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 6.1e-23 113.6 83 61.4
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 5.7e-21 107.1 94 56.4
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 4.8e-20 104.0 333 30.9
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 2.4e-19 101.7 250 34.4
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 6.5e-17 93.6 253 32.0
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.8e-14 85.5 213 31.9
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 2.4e-11 75.1 106 44.3
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 2.7e-10 71.6 78 43.6
CBR_g41780 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-06 58.5 44 59.1


User provided reference genes

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