Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1654.2 Capsicum annuum HOM05D002705 ORTHO05D004955 4.8e-247 857.4 451 100.0
CAN.G1406.1 Capsicum annuum HOM05D002705 ORTHO05D004955 3.2e-219 765.0 433 93.5
CAN.G408.1 Capsicum annuum HOM05D002705 ORTHO05D004955 5.4e-89 332.4 165 97.6
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 1.6e-80 304.3 161 91.3
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 1.6e-80 304.3 161 91.3
Nitab4.5_0000103g0340 Nicotiana tabacum HOM05D002705 ORTHO05D004955 1.6e-77 294.3 161 87.6
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 1.4e-76 291.2 161 87.6
Peaxi162Scf00073g01729 Petunia axillaris HOM05D002705 ORTHO05D004955 2.1e-69 267.3 155 84.5
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 4.9e-66 256.1 164 74.4
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 1.6e-64 251.1 164 72.0
MSTRG.8400 Avicennia marina HOM05D002705 ORTHO05D004955 3.5e-64 250.0 164 72.6
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 4.6e-64 249.6 164 75.6
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 1.0e-63 248.4 164 71.3
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 8.6e-63 245.4 165 70.9
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 7.3e-62 242.3 165 71.5
unitig_578.g16613 Utricularia gibba HOM05D002705 ORTHO05D004955 2.1e-61 240.7 164 67.1
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 3.1e-60 236.9 203 59.6
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 4.4e-59 233.0 165 66.7
Hma1.2p1_2119F.1_g314370 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 4.4e-59 233.0 165 69.7
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 1.3e-58 231.5 164 66.5
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 1.7e-58 231.1 165 67.3
CSS0042603 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D004955 2.2e-58 230.7 161 68.9
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 2.2e-58 230.7 167 66.5
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 2.2e-58 230.7 167 66.5
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 3.7e-58 229.9 165 66.7
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 3.7e-58 229.9 165 68.5
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 4.9e-58 229.6 163 66.3
Lj8C49G2 Lonicera japonica HOM05D002705 ORTHO05D004955 6.4e-58 229.2 165 67.9
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 8.3e-58 228.8 166 67.5
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 8.3e-58 228.8 165 68.5
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 1.1e-57 228.4 165 66.1
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 1.4e-57 228.0 165 67.9
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 1.4e-57 228.0 165 67.9
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 2.4e-57 227.3 163 66.3
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 3.2e-57 226.9 165 66.7
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 4.1e-57 226.5 165 66.7
ECA232G4016 Erigeron canadensis HOM05D002705 ORTHO05D004955 5.4e-57 226.1 166 65.7
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 5.4e-57 226.1 165 67.3
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 5.4e-57 226.1 165 67.3
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 7.1e-57 225.7 166 67.5
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 9.2e-57 225.3 165 66.7
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 9.2e-57 225.3 165 66.7
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 9.2e-57 225.3 165 67.3
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 1.2e-56 224.9 185 59.5
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 1.2e-56 224.9 165 66.7
Manes.14G040900 Manihot esculenta HOM05D002705 ORTHO05D004955 2.7e-56 223.8 243 49.0
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 3.5e-56 223.4 165 66.1
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 4.6e-56 223.0 185 59.5
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 4.6e-56 223.0 165 66.7
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 4.6e-56 223.0 165 64.2
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 6.0e-56 222.6 165 68.5
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.3e-55 221.5 165 66.7
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 1.7e-55 221.1 165 64.8
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 1.7e-55 221.1 165 63.0
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 2.3e-55 220.7 163 66.3
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.0e-55 220.3 165 66.1
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 1.1e-54 218.4 192 59.9
MD07G1245700 Malus domestica HOM05D002705 ORTHO05D004955 5.6e-54 216.1 180 60.6
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 5.6e-54 216.1 165 63.0
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 7.3e-54 215.7 166 65.7
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 9.6e-54 215.3 165 66.1
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 1.2e-53 214.9 162 62.3
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 1.2e-53 214.9 162 62.3
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 1.2e-53 214.9 165 63.6
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 1.6e-53 214.5 166 63.9
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 2.8e-53 213.8 165 60.6
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 8.1e-53 212.2 167 61.7
EL10As1g23078 Beta vulgaris HOM05D002705 ORTHO05D004955 2.4e-52 210.7 162 63.0
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 2.4e-52 210.7 171 59.6
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 8.9e-52 208.8 165 59.4
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 1.2e-51 208.4 164 63.4
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 1.2e-51 208.4 164 62.2
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 1.2e-51 208.4 164 62.2
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 1.5e-51 208.0 171 60.2
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 1.5e-51 208.0 170 58.2
AUR62042388 Chenopodium quinoa HOM05D002705 ORTHO05D004955 1.5e-51 208.0 164 61.6
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 1.5e-51 208.0 163 63.8
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 2.0e-51 207.6 170 58.2
Ca_09785_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 2.6e-51 207.2 165 61.2
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 4.4e-51 206.5 173 57.2
TPR.G18561 Trifolium pratense HOM05D002705 ORTHO05D004955 1.3e-50 204.9 165 60.0
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 1.7e-50 204.5 170 57.6
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 1.7e-50 204.5 170 57.6
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 3.8e-50 203.4 167 59.3
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 3.8e-50 203.4 161 59.6
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 3.8e-50 203.4 171 57.3
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 4.9e-50 203.0 171 59.1
Psat6g140240 Pisum sativum HOM05D002705 ORTHO05D004955 6.4e-50 202.6 165 58.8
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 6.4e-50 202.6 164 61.0
vmacro06848 Vaccinium macrocarpon HOM05D002705 ORTHO05D004955 1.1e-49 201.8 245 48.2
Medtr1g072800 Medicago truncatula HOM05D002705 ORTHO05D004955 1.4e-49 201.4 165 59.4
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 2.4e-49 200.7 169 58.6
CAN.G1654.1 Capsicum annuum HOM05D002705 ORTHO05D004955 4.2e-49 199.9 99 99.0
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 5.4e-49 199.5 165 59.4
CAN.G1406.2 Capsicum annuum HOM05D002705 ORTHO05D004955 6.0e-48 196.1 107 89.7
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 2.4e-44 184.1 164 56.7
AagrBONN_evm.TU.Sc2ySwM_117.709 Anthoceros agrestis HOM05D002705 ORTHO05D004955 5.3e-44 183.0 169 53.8
Pp3c1_29170 Physcomitrium patens HOM05D002705 ORTHO05D004955 2.0e-43 181.0 191 48.7
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 1.3e-42 178.3 181 54.1
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 2.2e-42 177.6 169 51.5
SMO263G0015 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 2.5e-38 164.1 161 49.1
CAN.G39.14 Capsicum annuum HOM05D005318 ORTHO05D006791 2.6e-35 154.1 126 69.0
CAN.G1559.3 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-33 147.9 107 74.8
AagrBONN_evm.TU.Sc2ySwM_340.578 Anthoceros agrestis HOM05D002705 ORTHO05D004955 3.2e-33 147.1 113 57.5
SMO118G0423 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 3.2e-33 147.1 161 47.8
HPP92_027816 Vanilla planifolia HOM05D002705 ORTHO05D004955 4.6e-32 143.3 99 67.7
COL.COLO4_37311 Corchorus olitorius HOM05D002705 ORTHO05D004955 2.3e-23 114.4 167 40.7
FAN01G1045 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.6e-19 100.9 90 54.4
FAN17G2187 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.8e-12 78.2 67 58.2
arahy.Tifrunner.gnm1.ann1.WYM0Y2 Arachis hypogaea HOM05D002705 ORTHO05D004955 6.5e-10 69.7 49 65.3
arahy.Tifrunner.gnm1.ann1.ZG0SUW Arachis hypogaea HOM05D002705 ORTHO05D004955 6.5e-10 69.7 49 65.3
AagrBONN_evm.TU.Sc2ySwM_368.2221 Anthoceros agrestis HOM05D002705 ORTHO05D004955 8.5e-10 69.3 149 32.9
Pp3s32_280 Physcomitrium patens HOM05D020685 ORTHO05D022318 9.4e-09 65.9 128 31.2
SEGI_13522 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.6e-08 65.1 122 33.6
CBR_g22322 Chara braunii HOM05D000019 ORTHO05D000002 2.1e-08 64.7 165 27.3
MCO05G634 Micromonas commoda HOM05D002705 ORTHO05D004955 2.7e-08 64.3 166 30.1
Sc11g0004220 Simmondsia chinensis HOM05D002705 ORTHO05D004955 2.7e-08 64.3 43 67.4
AagrBONN_evm.TU.Sc2ySwM_362.2714 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.0e-07 62.4 81 37.0
Mapoly0020s0153 Marchantia polymorpha HOM05D002705 ORTHO05D004955 2.5e-06 57.8 95 35.8
Cfa026800 Carpinus fangiana HOM05D002705 ORTHO05D004955 3.3e-06 57.4 137 31.4
ATR0789G167 Amborella trichopoda HOM05D002705 ORTHO05D004955 5.7e-06 56.6 75 34.7
SMO118G0216 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 9.7e-06 55.8 57 43.9


User provided reference genes

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