Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 9.3e-201 703.4 362 100.0
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 6.5e-186 654.1 362 92.3
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 1.0e-183 646.7 363 91.7
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 6.7e-175 617.5 362 88.4
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.8e-172 609.4 347 90.8
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 1.2e-171 606.7 361 86.7
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 3.0e-167 592.0 326 92.3
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 9.7e-166 587.0 347 87.3
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 7.0e-148 527.7 367 76.3
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 2.9e-146 522.3 362 76.8
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 1.9e-145 519.6 362 76.0
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 1.2e-144 516.9 362 75.4
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 4.7e-144 515.0 362 74.9
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 8.0e-144 514.2 362 74.6
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 4.4e-142 508.4 361 75.6
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 1.3e-141 506.9 362 74.0
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 2.2e-141 506.1 364 75.0
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 4.8e-141 505.0 362 74.6
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 8.3e-141 504.2 335 77.6
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 1.4e-140 503.4 362 73.5
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.8e-140 503.1 362 74.9
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 4.1e-140 501.9 362 72.7
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 5.4e-140 501.5 362 74.9
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.4e-140 501.5 350 76.6
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 2.0e-139 499.6 362 71.3
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 2.7e-139 499.2 365 73.2
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 3.5e-139 498.8 332 79.2
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 4.5e-139 498.4 363 71.9
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 7.7e-139 497.7 365 72.3
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 1.3e-138 496.9 323 80.2
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 3.8e-138 495.4 363 72.2
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 6.5e-138 494.6 307 82.4
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 6.5e-138 494.6 360 74.2
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 8.5e-138 494.2 364 72.0
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 3.2e-137 492.3 304 84.9
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.6e-136 488.8 296 86.5
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 8.0e-136 487.6 365 71.5
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 8.0e-136 487.6 345 73.6
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 1.4e-135 486.9 318 79.6
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 3.0e-135 485.7 372 71.5
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 4.0e-135 485.3 362 71.5
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 6.8e-135 484.6 330 76.1
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 4.4e-134 481.9 365 71.2
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 7.5e-134 481.1 310 80.3
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 1.3e-133 480.3 362 70.4
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 1.7e-133 479.9 371 69.8
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 2.2e-133 479.6 330 77.6
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.8e-133 479.2 304 81.6
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 2.8e-133 479.2 324 77.2
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.7e-133 478.8 362 71.0
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 1.1e-132 477.2 324 77.5
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.4e-132 476.9 359 71.0
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 1.8e-132 476.5 307 80.1
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 2.4e-132 476.1 360 70.8
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 5.4e-132 474.9 305 79.7
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 2.0e-131 473.0 313 78.6
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 3.5e-131 472.2 305 79.7
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 4.5e-131 471.9 326 75.5
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 4.5e-131 471.9 357 70.6
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 7.8e-131 471.1 311 79.1
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 1.0e-130 470.7 297 80.8
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.0e-130 470.7 312 78.8
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 1.3e-130 470.3 326 74.5
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 2.3e-130 469.5 367 70.8
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 6.6e-130 468.0 305 79.0
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 1.1e-129 467.2 326 75.2
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 1.1e-129 467.2 326 75.2
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 1.1e-129 467.2 304 79.9
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 1.1e-129 467.2 305 79.3
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 2.5e-129 466.1 326 74.8
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 4.3e-129 465.3 305 79.0
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 4.3e-129 465.3 305 79.0
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 5.6e-129 464.9 305 79.0
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 3.6e-128 462.2 312 77.9
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 2.3e-127 459.5 364 67.9
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 2.6e-126 456.1 362 68.5
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 2.2e-125 453.0 295 78.3
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 2.9e-125 452.6 341 71.3
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 4.9e-125 451.8 364 68.1
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 4.9e-125 451.8 365 66.6
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 7.0e-124 448.0 355 68.5
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 9.2e-124 447.6 362 68.0
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 1.2e-123 447.2 323 74.9
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 4.6e-123 445.3 258 88.0
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 7.8e-123 444.5 261 86.2
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 7.8e-123 444.5 350 68.9
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 1.0e-122 444.1 305 77.4
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 6.6e-122 441.4 362 65.2
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 8.6e-122 441.0 362 68.0
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 3.3e-121 439.1 257 86.0
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 8.0e-120 434.5 242 92.6
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 4.0e-119 432.2 325 70.8
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 8.9e-119 431.0 359 64.1
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.0e-118 429.9 359 64.1
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 4.4e-118 428.7 359 63.8
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 1.7e-117 426.8 359 64.3
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.7e-117 425.6 359 64.6
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 6.4e-117 424.9 359 62.7
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 7.8e-115 417.9 373 63.0
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 3.0e-114 416.0 358 62.6
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 4.7e-112 408.7 295 72.9
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 8.1e-112 407.9 323 67.8
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 1.1e-111 407.5 304 69.4
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 2.3e-111 406.4 290 72.4
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 6.8e-111 404.8 312 69.6
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.5e-110 403.7 325 65.8
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 2.0e-110 403.3 312 69.2
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 3.4e-110 402.5 299 70.9
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 3.4e-110 402.5 359 61.8
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 2.4e-108 396.4 258 76.4
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 2.7e-107 392.9 341 60.7
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 2.7e-107 392.9 257 77.8
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 4.6e-107 392.1 260 76.2
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.9e-106 389.0 344 63.7
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 9.5e-105 384.4 268 73.5
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 3.6e-104 382.5 305 68.2
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 8.1e-104 381.3 259 72.2
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 1.9e-100 370.2 263 76.0
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 2.5e-97 359.8 245 75.1
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 6.0e-91 338.6 252 67.1
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 6.2e-88 328.6 256 64.8
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 9.0e-87 324.7 254 68.5
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 1.3e-85 320.9 177 96.0
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 1.6e-75 287.3 249 59.8
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 2.7e-75 286.6 272 63.2
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 6.2e-72 275.4 191 79.1
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 5.8e-70 268.9 185 74.1
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 3.2e-52 209.9 157 67.5
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 2.9e-45 186.8 103 91.3
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 8.5e-45 185.3 118 74.6
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 7.7e-38 162.2 103 81.6
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 7.7e-38 162.2 103 81.6
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 4.4e-33 146.4 110 65.5
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 2.8e-24 117.1 232 39.2
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 3.5e-22 110.2 63 87.3
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 9.5e-20 102.1 192 32.8
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 3.3e-12 77.0 43 81.4


User provided reference genes

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