Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G16.7 Capsicum annuum HOM05D006976 ORTHO05D008761 5.7e-74 280.8 138 100.0
CAN.G129.10 Capsicum annuum HOM05D006976 ORTHO05D008761 1.3e-62 243.0 136 87.5
CAN.G232.11 Capsicum annuum HOM05D006976 ORTHO05D008761 1.1e-58 229.9 136 83.8
Solyc00g500020.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 3.8e-54 214.9 136 80.1
Solyc00g500067.1 Solanum lycopersicum HOM05D000806 ORTHO05D002324 3.8e-54 214.9 136 80.1
Lj2P1239T139 Lonicera japonica HOM05D006976 ORTHO05D008761 2.6e-50 202.2 136 74.3
HanXRQChr01g0020351 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr10g0283561 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr10g0284251 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr10g0289271 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr10g0318191 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr11g0326831 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr13g0421821 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr15g0497531 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr16g0528991 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQChr17g0548241 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
HanXRQCPg0580041 Helianthus annuus HOM05D006976 ORTHO05D008761 7.4e-50 200.7 136 73.5
SalBow1G3572 Salvia bowleyana HOM05D006976 ORTHO05D008761 1.1e-48 196.8 136 72.1
HanXRQChr11g0345161 Helianthus annuus HOM05D006976 ORTHO05D008761 1.4e-48 196.4 136 72.1
Hma1.2p1_1409F.1_g281660 Hydrangea macrophylla HOM05D006976 ORTHO05D008761 5.3e-48 194.5 135 73.3
Lj1P303T18 Lonicera japonica HOM05D006976 ORTHO05D008761 1.2e-47 193.4 136 70.6
Eucgr.E01114 Eucalyptus grandis HOM05D006976 ORTHO05D008761 7.7e-47 190.7 136 69.9
Eucgr.E02607 Eucalyptus grandis HOM05D006976 ORTHO05D008761 7.7e-47 190.7 136 69.9
Potri.016G094100 Populus trichocarpa HOM05D006976 ORTHO05D008761 2.9e-46 188.7 136 69.1
Gohir.D01G101878 Gossypium hirsutum HOM05D006976 ORTHO05D008761 3.8e-46 188.3 135 68.1
DCAR_032496 Daucus carota HOM05D006976 ORTHO05D008761 5.0e-46 188.0 136 68.4
Potri.013G162300 Populus trichocarpa HOM05D006976 ORTHO05D008761 6.5e-46 187.6 136 68.4
Nn2g14969 Nelumbo nucifera HOM05D006976 ORTHO05D008761 8.5e-46 187.2 135 69.6
PSO548G0011 Papaver somniferum HOM05D006976 ORTHO05D008761 1.1e-45 186.8 135 67.4
Sed0001172 Sechium edule HOM05D006976 ORTHO05D008761 1.9e-45 186.0 136 69.1
RcHm_v2.0_CPg0502081 Rosa chinensis HOM05D006976 ORTHO05D008761 2.5e-45 185.7 135 68.1
PGR111G0047 Punica granatum HOM05D006976 ORTHO05D008761 2.1e-44 182.6 135 68.9
GSVIVG01029875001 Vitis vinifera HOM05D006976 ORTHO05D008761 3.0e-43 178.7 135 68.1
Hund07993 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.0e-43 178.3 135 65.9
Hund29806 Selenicereus undatus HOM05D000806 ORTHO05D002324 4.0e-43 178.3 135 65.9
GSVIVG01030620001 Vitis vinifera HOM05D006976 ORTHO05D008761 2.0e-42 176.0 123 72.4
CARHR282110 Cardamine hirsuta HOM05D006976 ORTHO05D008761 4.4e-42 174.9 135 63.7
BcaC03g16543 Brassica carinata HOM05D006976 ORTHO05D008761 5.7e-42 174.5 135 63.7
C09p40240 Brassica napus HOM05D006976 ORTHO05D008761 5.7e-42 174.5 135 63.7
BolSC35t60749H Brassica oleracea HOM05D006976 ORTHO05D008761 5.7e-42 174.5 135 63.7
BolSC46t61034H Brassica oleracea HOM05D006976 ORTHO05D008761 5.7e-42 174.5 135 63.7
BraSC25t45865Z Brassica rapa HOM05D006976 ORTHO05D008761 5.7e-42 174.5 135 63.7
ATCG00530 Arabidopsis thaliana HOM05D006976 ORTHO05D008761 2.2e-41 172.6 135 63.0
Thhalv10010976m.g Eutrema salsugineum HOM05D006976 ORTHO05D008761 1.4e-40 169.9 135 62.2
TAR633G2101 Trochodendron aralioides HOM05D006976 ORTHO05D008761 1.2e-39 166.8 115 72.2
BraA06t25422Z Brassica rapa HOM05D006976 ORTHO05D008761 1.6e-39 166.4 136 61.8
Medtr5g019520 Medicago truncatula HOM05D006976 ORTHO05D008761 2.0e-39 166.0 135 60.0
A06p23180 Brassica napus HOM05D006976 ORTHO05D008761 5.9e-39 164.5 127 64.6
BolSC49t61182H Brassica oleracea HOM05D006976 ORTHO05D008761 1.0e-38 163.7 129 62.8
Gorai.001G104700 Gossypium raimondii HOM05D006976 ORTHO05D008761 1.3e-38 163.3 121 66.1
Peaxi162Scf00021g00087 Petunia axillaris HOM05D000806 ORTHO05D002324 1.3e-38 163.3 136 64.0
BolC9t56930H Brassica oleracea HOM05D006976 ORTHO05D008761 1.7e-38 162.9 135 61.5
arahy.Tifrunner.gnm1.ann1.Z0BJS7 Arachis hypogaea HOM05D000806 ORTHO05D002324 3.8e-38 161.8 135 60.7
BolSC47t61096H Brassica oleracea HOM05D006976 ORTHO05D008761 1.1e-37 160.2 128 63.3
Gohir.D07G097266 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.1e-37 160.2 119 66.4
Phvul.002G278108 Phaseolus vulgaris HOM05D006976 ORTHO05D008761 1.6e-36 156.4 135 58.5
Hund28750 Selenicereus undatus HOM05D006976 ORTHO05D008761 2.1e-36 156.0 135 59.3
BolSC35t60647H Brassica oleracea HOM05D006976 ORTHO05D008761 5.2e-35 151.4 125 60.8
C02p43530 Brassica napus HOM05D006976 ORTHO05D008761 2.0e-34 149.4 129 60.5
HPP92_028424 Vanilla planifolia HOM05D006976 ORTHO05D008761 2.0e-34 149.4 136 54.4
Peaxi162Scf00413g00828 Petunia axillaris HOM05D000806 ORTHO05D002324 4.4e-34 148.3 88 86.4
AL2G20664 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 2.2e-33 146.0 135 56.3
HPP92_022279 Vanilla planifolia HOM05D006976 ORTHO05D008761 4.9e-33 144.8 136 52.9
Oeu028777.1 Olea europaea HOM05D000806 ORTHO05D002324 3.1e-32 142.1 102 64.7
Psat0s2754g0120 Pisum sativum HOM05D000806 ORTHO05D002324 4.1e-32 141.7 125 58.4
Nitab4.5_0002181g0020 Nicotiana tabacum HOM05D006976 ORTHO05D008761 1.2e-31 140.2 77 84.4
Psat0s2288g0200 Pisum sativum HOM05D006976 ORTHO05D008761 1.6e-31 139.8 125 58.4
Gohir.A09G041060 Gossypium hirsutum HOM05D006976 ORTHO05D008761 5.0e-30 134.8 100 66.0
AL2G21560 Arabidopsis lyrata HOM05D006976 ORTHO05D008761 1.4e-27 126.7 134 50.0
BraSC59t46590Z Brassica rapa HOM05D006976 ORTHO05D008761 8.9e-27 124.0 102 59.8
Gohir.A01G204050 Gossypium hirsutum HOM05D006976 ORTHO05D008761 1.3e-25 120.2 80 70.0
HanXRQChr08g0209641 Helianthus annuus HOM05D006976 ORTHO05D008761 2.0e-23 112.8 128 50.0
Sc03g0010000 Simmondsia chinensis HOM05D006976 ORTHO05D008761 2.7e-23 112.5 74 74.3
Oeu039082.1 Olea europaea HOM05D006976 ORTHO05D008761 1.7e-22 109.8 80 66.2
EL10Ac4g09265 Beta vulgaris HOM05D006976 ORTHO05D008761 6.6e-22 107.8 86 62.8
GSVIVG01017636001 Vitis vinifera HOM05D006976 ORTHO05D008761 8.6e-22 107.5 135 48.9
HanXRQChr02g0044891 Helianthus annuus HOM05D006976 ORTHO05D008761 1.0e-19 100.5 67 74.6
HanXRQChr05g0161171 Helianthus annuus HOM05D006976 ORTHO05D008761 5.2e-19 98.2 67 73.1
Gohir.D02G130401 Gossypium hirsutum HOM05D006976 ORTHO05D008761 2.0e-18 96.3 84 59.5
Gorai.005G146300 Gossypium raimondii HOM05D006976 ORTHO05D008761 7.5e-18 94.4 84 58.3
Migut.G01116 Erythranthe guttata HOM05D006976 ORTHO05D008761 8.3e-17 90.9 71 66.2
BolSC29t60590H Brassica oleracea HOM05D006976 ORTHO05D008761 3.2e-16 89.0 66 65.2
BolSC46t61001H Brassica oleracea HOM05D006976 ORTHO05D008761 3.2e-16 89.0 66 65.2
Prupe.7G029500 Prunus persica HOM05D006976 ORTHO05D008761 7.0e-16 87.8 66 66.7
Nn010s41437 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.2e-15 87.0 53 75.5
Nn010s41442 Nelumbo nucifera HOM05D006976 ORTHO05D008761 1.2e-15 87.0 66 65.2
Lalb_Chr23g0274511 Lupinus albus HOM05D006976 ORTHO05D008761 2.7e-15 85.9 91 54.9
Oeu012774.1 Olea europaea HOM05D006976 ORTHO05D008761 1.7e-14 83.2 64 64.1
Medtr3g111320 Medicago truncatula HOM05D006976 ORTHO05D008761 4.3e-13 78.6 66 56.1
Hund10572 Selenicereus undatus HOM05D006976 ORTHO05D008761 7.3e-13 77.8 66 57.6
Gorai.004G088500 Gossypium raimondii HOM05D006976 ORTHO05D008761 9.5e-13 77.4 91 48.4
Lalb_Chr18g0049641 Lupinus albus HOM05D006976 ORTHO05D008761 2.8e-12 75.9 62 58.1
TPR.G11768 Trifolium pratense HOM05D006976 ORTHO05D008761 1.1e-11 73.9 66 53.0
BNapus_Darmor_BZH_scaffold_253p00220 Brassica napus HOM05D000806 ORTHO05D002324 1.4e-11 73.6 59 59.3
Gorai.007G243600 Gossypium raimondii HOM05D000806 ORTHO05D002324 2.3e-11 72.8 50 68.0
arahy.Tifrunner.gnm1.ann1.Z0Q6DR Arachis hypogaea HOM05D006976 ORTHO05D008761 8.9e-11 70.9 82 48.8
Eucgr.I02539 Eucalyptus grandis HOM05D006976 ORTHO05D008761 1.5e-10 70.1 66 59.1
C09p40410 Brassica napus HOM05D006976 ORTHO05D008761 2.0e-10 69.7 54 55.6
Nitab4.5_0007680g0030 Nicotiana tabacum HOM05D000806 ORTHO05D007429 4.4e-10 68.6 45 77.8
BraSC103t45467Z Brassica rapa HOM05D006976 ORTHO05D008761 2.2e-09 66.2 57 61.4
Gorai.002G160100 Gossypium raimondii HOM05D006976 ORTHO05D008761 2.2e-09 66.2 47 68.1
FvH4_3g27991 Fragaria vesca HOM05D006976 ORTHO05D008761 6.4e-09 64.7 46 67.4
TPR.G15439 Trifolium pratense HOM05D006976 ORTHO05D008761 1.4e-08 63.5 55 54.5
MD10G1104000 Malus domestica HOM05D006976 ORTHO05D008761 7.1e-08 61.2 52 57.7
Oeu062852.1 Olea europaea HOM05D006976 ORTHO05D008761 1.6e-07 60.1 33 75.8
EL10As15g24128 Beta vulgaris HOM05D000806 ORTHO05D002324 4.6e-07 58.5 40 65.0
Lalb_Chr03g0036051 Lupinus albus HOM05D006976 ORTHO05D008761 3.0e-06 55.8 56 50.0
HanXRQChr02g0041581 Helianthus annuus HOM05D000806 ORTHO05D002324 8.6e-06 54.3 136 35.3


User provided reference genes

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