Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 7.4e-144 513.8 258 100.0
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 8.0e-122 440.7 258 87.6
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 2.6e-120 435.6 258 86.4
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 3.4e-120 435.3 258 86.4
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 6.3e-119 431.0 258 85.7
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 2.0e-117 426.0 258 84.9
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 2.9e-111 405.6 260 83.1
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 4.7e-90 335.1 275 65.8
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 2.6e-88 329.3 258 66.7
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 3.4e-88 328.9 221 74.7
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 7.6e-88 327.8 238 70.2
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 2.9e-87 325.9 261 68.2
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 8.4e-87 324.3 230 72.2
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 2.4e-86 322.8 241 69.3
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 3.2e-86 322.4 259 64.5
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 5.4e-86 321.6 262 66.4
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 7.1e-86 321.2 263 63.9
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 2.7e-85 319.3 262 65.6
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 3.5e-85 318.9 227 73.6
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 4.6e-85 318.5 241 68.9
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 6.0e-85 318.2 228 71.5
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 7.8e-85 317.8 261 67.0
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 2.3e-84 316.2 236 69.9
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 6.6e-84 314.7 265 64.2
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 8.6e-84 314.3 189 80.4
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.1e-83 313.9 265 63.8
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 1.1e-83 313.9 250 65.6
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 1.5e-83 313.5 225 70.7
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 1.5e-83 313.5 225 70.7
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.5e-83 313.5 258 64.3
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 1.5e-83 313.5 264 64.4
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 1.9e-83 313.2 258 64.3
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 7.3e-83 311.2 258 64.0
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 9.6e-83 310.8 196 76.0
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 1.2e-82 310.5 225 70.7
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 1.2e-82 310.5 225 70.7
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 1.2e-82 310.5 225 70.7
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 1.2e-82 310.5 211 73.0
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 2.1e-82 309.7 236 69.5
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 2.1e-82 309.7 267 64.8
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 2.8e-82 309.3 226 69.0
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 2.8e-82 309.3 196 77.6
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 2.8e-82 309.3 244 67.6
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 3.6e-82 308.9 257 63.8
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 3.6e-82 308.9 238 68.1
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 6.2e-82 308.1 193 77.7
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 6.2e-82 308.1 193 77.7
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 8.1e-82 307.8 240 66.2
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.1e-81 307.4 262 63.7
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 1.1e-81 307.4 225 68.9
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 1.4e-81 307.0 229 69.9
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 1.8e-81 306.6 266 62.4
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.8e-81 306.6 262 63.4
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 1.8e-81 306.6 236 67.8
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 1.8e-81 306.6 225 70.2
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 1.8e-81 306.6 188 80.9
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 2.4e-81 306.2 264 62.1
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 3.1e-81 305.8 226 69.5
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 3.1e-81 305.8 256 63.7
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 3.1e-81 305.8 258 64.3
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 4.0e-81 305.4 235 67.7
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 4.0e-81 305.4 235 67.7
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 5.2e-81 305.1 226 67.3
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 8.9e-81 304.3 268 61.9
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 1.2e-80 303.9 256 63.3
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 1.2e-80 303.9 257 63.8
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 2.0e-80 303.1 263 64.6
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 2.6e-80 302.8 225 69.8
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 2.6e-80 302.8 260 62.7
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 2.6e-80 302.8 193 76.2
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 3.4e-80 302.4 270 61.5
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 3.4e-80 302.4 235 66.8
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 4.4e-80 302.0 285 58.2
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 7.6e-80 301.2 260 62.3
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 9.9e-80 300.8 268 63.1
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.3e-79 300.4 226 68.1
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 1.7e-79 300.1 190 77.9
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 2.2e-79 299.7 232 65.1
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 3.8e-79 298.9 249 64.3
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 4.9e-79 298.5 229 66.4
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 6.4e-79 298.1 256 63.7
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 2.4e-78 296.2 225 68.0
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 3.2e-78 295.8 258 62.4
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 3.2e-78 295.8 247 62.3
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 4.2e-78 295.4 226 68.1
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 7.1e-78 294.7 230 67.8
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 1.2e-77 293.9 292 57.5
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 1.6e-77 293.5 194 74.2
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 6.0e-77 291.6 189 76.2
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 1.0e-76 290.8 238 65.1
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 5.1e-76 288.5 257 60.3
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 3.3e-75 285.8 230 66.1
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.6e-74 283.5 175 78.9
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 4.8e-74 282.0 176 77.3
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 2.4e-73 279.6 176 77.3
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 6.9e-73 278.1 299 53.5
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 4.4e-72 275.4 225 63.1
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.7e-71 273.5 191 71.7
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 8.4e-71 271.2 263 56.7
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 1.1e-70 270.8 190 71.6
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.0e-68 264.2 137 91.2
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 4.5e-64 248.8 188 68.1
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 3.8e-63 245.7 193 64.8
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 1.4e-62 243.8 223 57.8
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 9.0e-57 224.6 122 87.7
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 1.0e-52 211.1 185 60.5
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 8.2e-50 201.4 239 47.3
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 2.0e-48 196.8 204 53.9
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 3.2e-46 189.5 135 70.4
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 3.5e-45 186.0 208 50.0
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 6.1e-45 185.3 190 56.8
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 4.2e-38 162.5 165 49.1
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.1e-33 147.9 113 69.0
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.1e-33 147.9 181 45.9
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.6e-32 143.3 111 68.5
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 8.5e-31 138.3 71 90.1
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 3.2e-30 136.3 181 44.8
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 2.8e-26 123.2 61 91.8
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 8.0e-21 105.1 88 62.5
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 5.2e-20 102.4 135 44.4
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 7.5e-19 98.6 57 80.7
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 2.7e-16 90.1 50 80.0
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 1.0e-12 78.2 113 42.5
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 1.4e-12 77.8 113 42.5
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.8e-12 77.4 115 45.2
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 4.0e-12 76.3 126 40.5
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 4.4e-11 72.8 83 44.6
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 1.2e-08 64.7 65 52.3
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 5.0e-07 59.3 52 59.6


User provided reference genes

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