Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1561.16 Capsicum annuum HOM05D000921 ORTHO05D002852 1.7e-280 968.8 510 100.0
Sopen01g037870 Solanum pennellii HOM05D000921 ORTHO05D002852 4.5e-193 678.3 412 85.9
Solyc01g094050.1 Solanum lycopersicum HOM05D000921 ORTHO05D002852 1.3e-192 676.8 412 85.7
Peaxi162Scf00416g00039 Petunia axillaris HOM05D000921 ORTHO05D002852 6.5e-176 621.3 411 80.3
Dinv32396 Davidia involucrata HOM05D000921 ORTHO05D002852 1.2e-137 494.2 409 67.2
Nitab4.5_0002436g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 1.0e-136 491.1 396 71.2
RcHm_v2.0_Chr1g0351141 Rosa chinensis HOM05D000921 ORTHO05D002852 3.1e-133 479.6 382 66.5
Actinidia09569 Actinidia chinensis HOM05D000921 ORTHO05D002852 8.9e-133 478.0 398 65.6
vmacro13368 Vaccinium macrocarpon HOM05D000921 ORTHO05D002852 1.2e-132 477.6 409 63.6
Oeu029683.1 Olea europaea HOM05D000921 ORTHO05D002852 3.4e-132 476.1 402 65.4
CSS0003914 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D002852 1.3e-131 474.2 399 64.4
Rhsim07G0024100 Rhododendron simsii HOM05D000921 ORTHO05D002852 2.9e-131 473.0 432 61.3
FAN10G3046 Fragaria x ananassa HOM05D000921 ORTHO05D002852 5.4e-130 468.8 368 67.7
FvH4_7g12350 Fragaria vesca HOM05D000921 ORTHO05D002852 1.6e-129 467.2 370 67.0
FAN06G4917 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.6e-129 467.2 370 67.0
FAN06G2098 Fragaria x ananassa HOM05D000921 ORTHO05D002852 2.7e-129 466.5 370 66.8
Atru.chr5.339 Acer truncatum HOM05D000921 ORTHO05D002852 1.3e-128 464.2 402 64.2
FAN03G0226 Fragaria x ananassa HOM05D000921 ORTHO05D002852 1.3e-128 464.2 370 67.3
FAN10G3969 Fragaria x ananassa HOM05D000921 ORTHO05D002852 2.3e-128 463.4 368 66.8
MD02G1199600 Malus domestica HOM05D000921 ORTHO05D002852 3.9e-128 462.6 410 62.4
CANSAT56G4522 Cannabis sativa HOM05D000921 ORTHO05D002852 5.1e-128 462.2 387 65.1
FAN01G1835 Fragaria x ananassa HOM05D000921 ORTHO05D002852 5.1e-128 462.2 370 66.8
Prupe.2G149000 Prunus persica HOM05D000921 ORTHO05D002852 1.5e-127 460.7 419 61.8
Ciclev10024213m.g Citrus clementina HOM05D000921 ORTHO05D002852 4.3e-127 459.1 379 66.5
Migut.F01430 Erythranthe guttata HOM05D000921 ORTHO05D002852 1.2e-126 457.6 405 62.7
QL08p051741 Quercus lobata HOM05D000921 ORTHO05D002852 1.2e-126 457.6 416 61.8
Cpa.g.sc18.152 Carica papaya HOM05D000921 ORTHO05D002852 2.8e-126 456.4 410 61.5
CiPaw.02G165500 Carya illinoinensis HOM05D000921 ORTHO05D002852 6.2e-126 455.3 416 61.1
TWI14G1087 Tripterygium wilfordii HOM05D000921 ORTHO05D002852 1.1e-125 454.5 402 64.9
SGA_v2.0_scaffold303G47875 Striga asiatica HOM05D000921 ORTHO05D002852 9.0e-125 451.4 392 63.0
Lj9A573G74 Lonicera japonica HOM05D000921 ORTHO05D002852 1.5e-124 450.7 428 60.0
arahy.Tifrunner.gnm1.ann1.FVGU3J Arachis hypogaea HOM05D000921 ORTHO05D002852 5.8e-124 448.7 386 63.2
arahy.Tifrunner.gnm1.ann1.UYJG1L Arachis hypogaea HOM05D000921 ORTHO05D002852 5.8e-124 448.7 386 63.2
COL.COLO4_12586 Corchorus olitorius HOM05D000921 ORTHO05D002852 5.8e-124 448.7 408 61.0
Thecc.01G372900 Theobroma cacao HOM05D000921 ORTHO05D002852 1.3e-123 447.6 414 59.4
ClCG05G002030 Citrullus lanatus HOM05D000921 ORTHO05D002852 2.9e-123 446.4 414 59.7
Nitab4.5_0005340g0070 Nicotiana tabacum HOM05D000921 ORTHO05D002852 2.9e-123 446.4 323 77.4
Phvul.008G074600 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 2.9e-123 446.4 437 58.6
DCAR_025120 Daucus carota HOM05D000921 ORTHO05D002852 1.1e-122 444.5 414 61.1
Glyma.18G223300 Glycine max HOM05D000921 ORTHO05D002852 1.1e-122 444.5 408 61.5
VMungo1383G3256 Vigna mungo HOM05D000921 ORTHO05D002852 1.4e-122 444.1 398 61.6
Glyma.09G267100 Glycine max HOM05D000921 ORTHO05D002852 1.9e-122 443.7 438 58.4
Potri.002G150000 Populus trichocarpa HOM05D000921 ORTHO05D002852 1.9e-122 443.7 416 61.1
MELO3C006169.2 Cucumis melo HOM05D000921 ORTHO05D002852 3.2e-122 443.0 418 58.9
CsaV3_3G009490 Cucumis sativus L. HOM05D000921 ORTHO05D002852 3.2e-122 443.0 414 60.1
Sabra02G0118700 Salix brachista HOM05D000921 ORTHO05D002852 1.6e-121 440.7 379 64.6
HanXRQChr04g0122231 Helianthus annuus HOM05D000921 ORTHO05D002852 3.5e-121 439.5 431 58.5
Sed0009254 Sechium edule HOM05D000921 ORTHO05D002852 6.0e-121 438.7 413 59.3
TPR.G37773 Trifolium pratense HOM05D000921 ORTHO05D002852 3.0e-120 436.4 400 59.8
Potri.014G072600 Populus trichocarpa HOM05D000921 ORTHO05D002852 6.6e-120 435.3 415 59.0
Gohir.A11G082900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 1.9e-119 433.7 403 59.8
Manes.05G043300 Manihot esculenta HOM05D000921 ORTHO05D002852 3.3e-119 433.0 402 61.4
Ca_07837_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 4.3e-119 432.6 293 72.4
Gorai.007G092900 Gossypium raimondii HOM05D000921 ORTHO05D002852 5.6e-119 432.2 408 59.3
Aqoxy7G00539 Aquilegia oxysepala HOM05D000921 ORTHO05D002852 1.3e-118 431.0 369 64.5
Gohir.D11G087000 Gossypium hirsutum HOM05D000921 ORTHO05D002852 1.6e-118 430.6 414 58.0
Sc26g0001150 Simmondsia chinensis HOM05D000921 ORTHO05D002852 1.6e-118 430.6 386 61.9
Gorai.004G041500 Gossypium raimondii HOM05D000921 ORTHO05D002852 4.8e-118 429.1 425 58.4
Gohir.D08G042932 Gossypium hirsutum HOM05D000921 ORTHO05D002852 8.1e-118 428.3 432 57.9
Lalb_Chr01g0021281 Lupinus albus HOM05D000921 ORTHO05D002852 8.1e-118 428.3 400 58.0
LjContig00136g0027596 Lotus japonicus HOM05D000921 ORTHO05D002852 1.4e-117 427.6 392 60.7
Gohir.A08G031900 Gossypium hirsutum HOM05D000921 ORTHO05D002852 2.4e-117 426.8 425 57.9
Medtr7g075660 Medicago truncatula HOM05D000921 ORTHO05D002852 9.0e-117 424.9 394 59.9
Aa31LG1G27030 Aethionema arabicum HOM05D000921 ORTHO05D002852 1.5e-116 424.1 381 60.1
Sed0001143 Sechium edule HOM05D000921 ORTHO05D002852 2.0e-116 423.7 424 56.8
Lalb_Chr07g0189591 Lupinus albus HOM05D000921 ORTHO05D002852 4.5e-116 422.5 406 57.4
THA.LOC104827617 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 7.6e-116 421.8 412 58.3
TPR.G28298 Trifolium pratense HOM05D000921 ORTHO05D002852 9.9e-116 421.4 431 54.8
Nn1g01159 Nelumbo nucifera HOM05D000921 ORTHO05D002852 1.3e-115 421.0 395 60.5
Sabra14G0051800 Salix brachista HOM05D000921 ORTHO05D002852 1.3e-115 421.0 371 62.8
Nn6g34350 Nelumbo nucifera HOM05D000921 ORTHO05D002852 1.7e-115 420.6 391 59.6
TAR629G2419 Trochodendron aralioides HOM05D000921 ORTHO05D002852 1.7e-115 420.6 315 69.2
TAR629G0908 Trochodendron aralioides HOM05D000921 ORTHO05D002852 2.9e-115 419.9 315 69.2
Carub.0004s2816 Capsella rubella HOM05D000921 ORTHO05D002852 8.4e-115 418.3 385 60.3
Thhalv10001277m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 8.4e-115 418.3 385 60.5
Lsat_1_v5_gn_7_7601 Lactuca sativa HOM05D000921 ORTHO05D002852 1.4e-114 417.5 425 55.1
AT2G45540 Arabidopsis thaliana HOM05D000921 ORTHO05D002852 3.2e-114 416.4 377 61.8
ECA236G3038 Erigeron canadensis HOM05D000921 ORTHO05D002852 3.2e-114 416.4 425 55.8
Psat4g150320 Pisum sativum HOM05D000921 ORTHO05D002852 1.2e-113 414.5 395 57.0
Haze_16736 Corylus avellana HOM05D000921 ORTHO05D002852 2.1e-113 413.7 387 59.9
Medtr8g035750 Medicago truncatula HOM05D000921 ORTHO05D002852 4.6e-113 412.5 429 55.5
PSO478G4503 Papaver somniferum HOM05D000921 ORTHO05D002852 3.9e-112 409.5 441 56.2
Ca_23823_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 1.5e-111 407.5 404 55.4
Ca_23828_v3 Cicer arietinum L. HOM05D000921 ORTHO05D002852 1.5e-111 407.5 404 55.4
Sc02g0002400 Simmondsia chinensis HOM05D000921 ORTHO05D002852 1.5e-111 407.5 386 58.8
Glyma.03G021400 Glycine max HOM05D000921 ORTHO05D002852 1.3e-110 404.4 409 56.5
PSO782G1119 Papaver somniferum HOM05D000921 ORTHO05D002852 1.3e-110 404.4 436 55.7
AL937U10010 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 6.2e-110 402.1 266 74.8
VMungo0331G0475 Vigna mungo HOM05D000921 ORTHO05D002852 2.4e-109 400.2 293 68.6
Gohir.D08G149700 Gossypium hirsutum HOM05D000921 ORTHO05D002852 6.9e-109 398.7 276 71.7
Thhalv10005733m.g Eutrema salsugineum HOM05D000921 ORTHO05D002852 3.4e-108 396.4 415 56.6
Gorai.004G155500 Gossypium raimondii HOM05D000921 ORTHO05D002852 4.5e-108 396.0 276 71.4
Phvul.010G049000 Phaseolus vulgaris HOM05D000921 ORTHO05D002852 4.5e-108 396.0 407 54.8
Carub.0005s2767 Capsella rubella HOM05D000921 ORTHO05D002852 1.4e-106 391.0 289 69.6
Sp5g02330 Schrenkiella parvula HOM05D000921 ORTHO05D002852 5.5e-106 389.0 293 68.6
EL10Ac1g00924 Beta vulgaris HOM05D000921 ORTHO05D002852 9.3e-106 388.3 377 58.6
A04p01340 Brassica napus HOM05D000921 ORTHO05D002852 3.5e-105 386.3 369 57.5
BraA04t15853Z Brassica rapa HOM05D000921 ORTHO05D002852 6.0e-105 385.6 362 58.0
MBI04_g43159_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 6.0e-105 385.6 401 57.4
BraA05t19525Z Brassica rapa HOM05D000921 ORTHO05D002852 1.0e-104 384.8 369 59.6
Psat3g104040 Pisum sativum HOM05D000921 ORTHO05D002852 1.0e-104 384.8 398 57.3
A05p05550 Brassica napus HOM05D000921 ORTHO05D002852 1.3e-104 384.4 406 55.4
AL5G43240 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 3.0e-104 383.3 297 66.7
BcaC07g42649 Brassica carinata HOM05D000921 ORTHO05D002852 3.0e-104 383.3 291 68.0
THA.LOC104801996 Tarenaya hassleriana HOM05D000921 ORTHO05D002852 5.1e-104 382.5 318 62.9
BcaC07g42651 Brassica carinata HOM05D000921 ORTHO05D002852 8.7e-104 381.7 290 67.9
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 2.8e-102 376.7 413 55.0
BolC4t22272H Brassica oleracea HOM05D000921 ORTHO05D002852 2.8e-102 376.7 413 55.0
BcaC02g10197 Brassica carinata HOM05D000921 ORTHO05D002852 6.2e-102 375.6 316 64.6
Aa31LG10G15130 Aethionema arabicum HOM05D000921 ORTHO05D002852 8.2e-102 375.2 272 70.2
C04p31670 Brassica napus HOM05D000921 ORTHO05D002852 8.2e-102 375.2 294 66.7
BolC4t24715H Brassica oleracea HOM05D000921 ORTHO05D002852 8.2e-102 375.2 294 66.7
CARHR171310 Cardamine hirsuta HOM05D000921 ORTHO05D002852 2.4e-101 373.6 301 65.1
Oeu003495.3 Olea europaea HOM05D000921 ORTHO05D002852 2.6e-100 370.2 241 75.1
BolC8t51174H Brassica oleracea HOM05D000921 ORTHO05D002852 2.9e-99 366.7 294 66.0
CDE11G1134 Ceratophyllum demersum HOM05D000921 ORTHO05D002852 2.9e-99 366.7 367 55.6
SHI13503 Sapria himalayana HOM05D000921 ORTHO05D002852 6.5e-99 365.5 292 66.1
MBI12_g38016_MAGBIO Magnolia biondii HOM05D000921 ORTHO05D002852 8.4e-99 365.2 357 56.6
BcaC07g40611 Brassica carinata HOM05D000921 ORTHO05D002852 1.1e-98 364.8 294 65.6
C08p35860 Brassica napus HOM05D000921 ORTHO05D002852 1.1e-98 364.8 294 65.6
Lj3g0001885 Lotus japonicus HOM05D000921 ORTHO05D002852 4.2e-98 362.8 406 53.4
A09p53140 Brassica napus HOM05D000921 ORTHO05D002852 5.5e-98 362.5 294 65.3
BraA09t40739Z Brassica rapa HOM05D000921 ORTHO05D002852 5.5e-98 362.5 294 65.3
AL4G44720 Arabidopsis lyrata HOM05D000921 ORTHO05D002852 3.0e-96 356.7 365 55.6
Lj7C526G8 Lonicera japonica HOM05D000921 ORTHO05D002852 3.9e-96 356.3 399 52.1
AUR62004245 Chenopodium quinoa HOM05D000921 ORTHO05D002852 4.8e-94 349.4 364 54.7
ECA240G3430 Erigeron canadensis HOM05D000921 ORTHO05D002852 2.6e-92 343.6 400 46.8
Dinv43732 Davidia involucrata HOM05D000921 ORTHO05D002852 9.4e-90 335.1 202 80.7
DCAR_006882 Daucus carota HOM05D000921 ORTHO05D002852 1.2e-89 334.7 311 60.5
AUR62013602 Chenopodium quinoa HOM05D000921 ORTHO05D002852 1.1e-87 328.2 354 53.7
Lsat_1_v5_gn_3_135480 Lactuca sativa HOM05D000921 ORTHO05D002852 1.5e-87 327.8 288 55.2
Haze_25413 Corylus avellana HOM05D000921 ORTHO05D002852 6.3e-86 322.4 324 57.4
HanXRQChr03g0093641 Helianthus annuus HOM05D000921 ORTHO05D002852 8.2e-86 322.0 338 50.9
ATR0757G054 Amborella trichopoda HOM05D000921 ORTHO05D002852 1.0e-83 315.1 407 45.9
SEGI_07876 Sequoiadendron giganteum HOM05D000921 ORTHO05D002852 1.3e-75 288.1 408 42.9
HPP92_003358 Vanilla planifolia HOM05D000921 ORTHO05D002852 7.2e-74 282.3 271 54.6
HPP92_009978 Vanilla planifolia HOM05D000921 ORTHO05D002852 6.7e-72 275.8 368 48.1
SMO347G0262 Selaginella moellendorffii HOM05D000921 ORTHO05D002852 3.1e-69 266.9 278 54.7
Zm00001eb074430 Zea mays HOM05D000921 ORTHO05D002852 1.0e-67 261.9 252 57.1
TAR636G1827 Trochodendron aralioides HOM05D000921 ORTHO05D002852 3.6e-65 253.4 158 78.5
Mapoly0056s0137 Marchantia polymorpha HOM05D000921 ORTHO05D002852 5.7e-63 246.1 268 49.3
Pp3c25_6190 Physcomitrium patens HOM05D000921 ORTHO05D002852 2.8e-62 243.8 309 46.6
Zm00001eb249850 Zea mays HOM05D000921 ORTHO05D002852 4.8e-62 243.0 310 45.8
Os02g0663300 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D002852 2.4e-61 240.7 326 44.2
Pp3c8_11180 Physcomitrium patens HOM05D000921 ORTHO05D002852 3.1e-61 240.4 300 43.3
Pp3c16_14330 Physcomitrium patens HOM05D000921 ORTHO05D002852 1.2e-57 228.4 281 48.8
Os04g0555600 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D002852 2.0e-55 221.1 177 65.0
CBR_g26195 Chara braunii HOM05D000921 ORTHO05D002852 4.4e-55 219.9 320 43.1
C08p35910 Brassica napus HOM05D000921 ORTHO05D002852 1.2e-47 195.3 160 65.6
Actinidia31440 Actinidia chinensis HOM05D000921 ORTHO05D002852 9.5e-42 175.6 125 69.6
Actinidia31441 Actinidia chinensis HOM05D000921 ORTHO05D002852 1.0e-40 172.2 218 50.5
unitig_22.g5372 Utricularia gibba HOM05D000921 ORTHO05D002852 2.3e-40 171.0 260 44.6
AagrBONN_evm.TU.Sc2ySwM_117.767 Anthoceros agrestis HOM05D000921 ORTHO05D002852 8.9e-40 169.1 421 34.0
unitig_22.g5373 Utricularia gibba HOM05D000921 ORTHO05D002852 1.2e-39 168.7 110 69.1
AT3G60920 Arabidopsis thaliana HOM05D000921 ORTHO05D002852 1.0e-35 155.6 105 69.5
VMungo1080G0771 Vigna mungo HOM05D000921 ORTHO05D002852 2.8e-33 147.5 107 66.4
arahy.Tifrunner.gnm1.ann1.TT85T0 Arachis hypogaea HOM05D000921 ORTHO05D002852 7.5e-23 112.8 59 88.1
Cc02_g36420 Coffea canephora HOM05D000921 ORTHO05D002852 7.5e-23 112.8 56 92.9
GSVIVG01027547001 Vitis vinifera HOM05D000921 ORTHO05D002852 1.1e-21 109.0 56 87.5
Gohir.A08G128400 Gossypium hirsutum HOM05D000921 ORTHO05D002852 2.4e-21 107.8 63 79.4
C08p35900 Brassica napus HOM05D000921 ORTHO05D002852 1.7e-19 101.7 56 83.9
TAR636G1461 Trochodendron aralioides HOM05D000921 ORTHO05D002852 3.4e-07 60.8 42 71.4
CBR_g9089 Chara braunii HOM05D000921 ORTHO05D004782 4.4e-07 60.5 140 30.7
Potri.002G111000 Populus trichocarpa HOM05D000921 ORTHO05D004782 9.9e-07 59.3 136 29.4
CANSAT54G2772 Cannabis sativa HOM05D000921 ORTHO05D004782 2.9e-06 57.8 138 30.4
VMungo0331G1647 Vigna mungo HOM05D034664 ORTHO05D002852 2.9e-06 57.8 40 62.5
Sabra02G0087600 Salix brachista HOM05D000921 ORTHO05D004782 8.4e-06 56.2 137 30.7


User provided reference genes

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