Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.8e-122 442.6 215 100.0
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 3.4e-110 401.7 216 90.3
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 2.2e-109 399.1 216 89.8
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.8e-103 379.4 217 87.1
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 5.9e-102 374.4 217 85.3
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.4e-100 369.8 216 84.3
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 4.7e-75 285.0 216 64.8
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.2e-73 280.4 217 62.2
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.3e-72 276.9 216 64.4
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.7e-72 276.6 217 60.8
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 2.2e-72 276.2 193 69.4
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 1.4e-71 273.5 220 61.4
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 1.2e-70 270.4 219 62.1
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.6e-70 270.0 216 61.1
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.6e-70 270.0 216 61.1
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 7.7e-70 267.7 216 61.1
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 7.7e-70 267.7 218 60.6
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 6.5e-69 264.6 222 60.8
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 1.1e-68 263.8 218 61.9
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.1e-68 263.8 216 62.5
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 1.9e-68 263.1 219 61.2
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.9e-68 263.1 217 61.8
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 5.5e-68 261.5 216 62.0
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 2.7e-67 259.2 216 60.6
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 2.3e-66 256.1 218 56.9
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 2.3e-66 256.1 222 56.3
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 3.0e-66 255.8 218 61.5
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 3.0e-66 255.8 218 57.3
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 3.0e-66 255.8 174 69.5
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 5.2e-66 255.0 210 58.1
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 1.5e-65 253.4 220 59.5
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 4.4e-65 251.9 159 71.1
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 5.7e-65 251.5 218 55.5
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 5.7e-65 251.5 219 57.5
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 5.7e-65 251.5 216 61.1
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.3e-64 250.4 218 56.4
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 2.8e-64 249.2 217 58.5
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 4.9e-64 248.4 217 57.6
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 8.3e-64 247.7 215 57.7
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 8.3e-64 247.7 217 59.0
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 1.1e-63 247.3 158 73.4
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.8e-63 246.5 177 66.1
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.1e-63 245.7 215 57.2
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 4.1e-63 245.4 217 58.1
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 4.1e-63 245.4 217 58.1
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 5.4e-63 245.0 218 58.7
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 9.2e-63 244.2 204 60.3
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 9.2e-63 244.2 223 58.3
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 1.2e-62 243.8 220 55.9
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 2.0e-62 243.0 219 57.1
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 2.7e-62 242.7 216 59.7
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 3.5e-62 242.3 216 58.8
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 5.9e-62 241.5 221 56.1
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 1.3e-61 240.4 217 57.1
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 1.7e-61 240.0 201 62.7
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 1.7e-61 240.0 215 57.2
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 1.7e-61 240.0 215 57.2
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 1.7e-61 240.0 215 57.2
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 2.3e-61 239.6 216 56.9
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 2.3e-61 239.6 212 56.6
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 2.9e-61 239.2 220 56.8
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 3.8e-61 238.8 223 58.7
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 3.8e-61 238.8 219 57.5
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 5.0e-61 238.4 217 56.7
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 6.6e-61 238.0 158 70.3
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 8.6e-61 237.7 217 56.7
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.5e-60 236.9 215 55.3
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 1.9e-60 236.5 216 56.0
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 3.3e-60 235.7 219 55.3
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 5.6e-60 235.0 218 57.3
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 1.2e-59 233.8 175 63.4
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 1.6e-59 233.4 160 69.4
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.6e-59 233.4 216 56.5
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 2.8e-59 232.6 216 57.4
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 4.7e-59 231.9 219 54.8
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 6.1e-59 231.5 217 57.1
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 8.0e-59 231.1 168 64.3
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 1.4e-58 230.3 219 54.3
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.4e-58 230.3 217 56.7
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 2.3e-58 229.6 217 53.9
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 4.0e-58 228.8 191 59.2
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 2.6e-57 226.1 215 54.9
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 1.3e-56 223.8 215 54.4
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.7e-56 223.4 218 55.0
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 9.2e-55 217.6 152 67.8
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 2.7e-54 216.1 218 53.2
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 5.0e-53 211.8 197 56.3
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 3.3e-52 209.1 216 49.5
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 4.3e-52 208.8 137 70.1
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 4.9e-48 195.3 217 48.4
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 1.3e-45 187.2 157 58.6
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 3.9e-45 185.7 219 47.5
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 7.5e-41 171.4 177 46.9
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 2.9e-40 169.5 134 55.2
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 1.1e-39 167.5 161 53.4
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 1.3e-37 160.6 139 56.1
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 1.9e-36 156.8 230 39.1
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 8.9e-34 147.9 157 47.1
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 2.2e-32 143.3 164 45.7
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.2e-27 127.5 82 69.5
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 2.8e-27 126.3 148 50.7
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 6.2e-27 125.2 145 40.7
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 4.0e-26 122.5 138 50.0
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 3.2e-23 112.8 52 96.2
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 9.9e-17 91.3 56 76.8
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 1.3e-16 90.9 156 37.8
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 3.6e-11 72.8 44 70.5


User provided reference genes

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