Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 3.7e-111 406.4 193 100.0
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 1.9e-107 394.0 193 95.3
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 1.1e-105 388.3 193 94.3
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 4.0e-105 386.3 193 93.3
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 4.6e-101 372.9 200 89.0
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 7.3e-99 365.5 194 89.2
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.4e-78 298.1 166 87.3
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 6.6e-76 289.3 191 71.2
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 5.6e-75 286.2 189 68.3
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 7.3e-75 285.8 193 66.8
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.3e-74 285.0 172 76.2
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 1.6e-74 284.6 194 67.0
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.4e-73 280.8 192 69.3
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 3.1e-73 280.4 189 70.4
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 5.3e-73 279.6 193 65.3
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 3.4e-72 276.9 194 66.5
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 4.5e-72 276.6 191 67.5
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 2.2e-71 274.2 192 66.7
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 2.2e-71 274.2 193 65.3
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 8.4e-71 272.3 189 67.2
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 8.4e-71 272.3 170 71.2
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 8.4e-71 272.3 191 67.5
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 1.1e-70 271.9 193 64.8
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 1.4e-70 271.6 193 64.2
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 3.2e-70 270.4 170 71.2
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 9.3e-70 268.9 192 67.2
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 1.6e-69 268.1 191 63.9
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 1.0e-68 265.4 189 64.6
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 1.8e-68 264.6 191 63.4
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 5.1e-68 263.1 175 69.7
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 1.5e-67 261.5 191 62.3
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 2.5e-67 260.8 194 64.9
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 2.5e-67 260.8 220 58.6
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 2.5e-67 260.8 189 64.0
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 1.3e-66 258.5 183 66.7
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 2.1e-66 257.7 189 60.8
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 2.8e-66 257.3 183 66.1
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 4.8e-66 256.5 192 63.5
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 6.2e-66 256.1 196 61.7
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 2.4e-65 254.2 193 63.2
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 3.1e-65 253.8 188 63.8
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 4.0e-65 253.4 187 60.4
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 5.3e-65 253.1 188 63.8
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 6.9e-65 252.7 187 64.7
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 1.2e-64 251.9 189 61.9
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 1.2e-64 251.9 171 70.2
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 3.4e-64 250.4 172 66.3
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 1.3e-63 248.4 191 57.6
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 1.3e-63 248.4 190 60.0
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 3.8e-63 246.9 184 63.0
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 2.5e-62 244.2 187 59.9
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 5.5e-62 243.0 191 57.1
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 5.5e-62 243.0 171 65.5
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 4.6e-61 240.0 170 63.5
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 4.6e-61 240.0 169 63.9
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 1.0e-60 238.8 157 70.7
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 1.3e-60 238.4 195 57.4
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 2.3e-60 237.7 161 67.7
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.0e-60 237.3 171 60.2
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.0e-60 237.3 171 60.2
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 3.9e-60 236.9 187 62.0
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 5.1e-60 236.5 161 68.9
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 5.1e-60 236.5 185 57.8
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 1.1e-59 235.3 161 68.3
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.1e-59 235.3 183 59.0
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 4.3e-59 233.4 161 68.3
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 5.7e-59 233.0 165 66.1
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 5.7e-59 233.0 161 67.1
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 7.4e-59 232.6 159 67.9
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 9.6e-59 232.3 161 67.1
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 1.3e-58 231.9 161 67.1
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 1.3e-58 231.9 218 51.4
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.6e-58 231.5 161 66.5
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 1.6e-58 231.5 225 51.6
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 2.8e-58 230.7 161 66.5
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 8.2e-58 229.2 193 56.5
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 1.4e-57 228.4 158 67.1
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 1.7e-55 221.5 169 60.4
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 1.9e-54 218.0 161 62.1
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.2e-53 215.3 138 73.2
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 4.6e-53 213.4 136 74.3
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 5.1e-52 209.9 204 50.0
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 1.9e-51 208.0 131 75.6
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 2.5e-51 207.6 160 62.5
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 2.2e-50 204.5 153 62.7
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 2.4e-49 201.1 171 55.0
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 5.3e-49 199.9 189 51.9
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 1.5e-48 198.4 150 59.3
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 5.5e-46 189.9 191 49.2
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 5.0e-39 166.8 128 61.7
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 8.5e-39 166.0 159 50.9
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 2.0e-32 144.8 110 61.8
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 5.9e-32 143.3 134 52.2
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 7.2e-30 136.3 131 51.9
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 4.0e-28 130.6 76 81.6
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 7.2e-22 109.8 128 39.8
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 2.1e-21 108.2 131 38.9
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 2.7e-21 107.8 72 75.0
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 4.0e-20 104.0 136 38.2
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 7.0e-17 93.2 159 34.6
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 3.8e-15 87.4 131 35.9
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 5.0e-15 87.0 55 72.7
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 5.0e-15 87.0 55 72.7
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 1.6e-13 82.0 54 70.4
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 1.0e-12 79.3 41 90.2
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 1.4e-12 79.0 46 73.9
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 2.6e-11 74.7 45 71.1
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 7.5e-11 73.2 107 38.3
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.4e-09 68.9 50 60.0
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 2.4e-09 68.2 39 79.5
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 1.5e-06 58.9 193 26.4


User provided reference genes

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