Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-52 209.5 103 100.0
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-52 209.5 103 100.0
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-52 209.5 103 100.0
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 3.5e-52 208.0 103 99.0
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 5.6e-50 200.7 103 96.1
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 1.6e-49 199.1 103 94.2
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.0e-48 196.4 103 93.2
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 5.2e-48 194.1 103 91.3
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 5.2e-48 194.1 103 91.3
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 8.9e-48 193.4 103 92.2
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 2.6e-47 191.8 103 90.3
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.4e-47 191.0 103 91.3
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.4e-47 191.0 103 91.3
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.4e-47 191.0 103 91.3
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 4.4e-47 191.0 103 91.3
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 91.3
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 9.8e-47 189.9 103 88.3
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.7e-46 189.1 102 89.2
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 2.2e-46 188.7 103 89.3
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.9e-45 185.7 103 88.3
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 2.4e-45 185.3 103 85.4
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 2.4e-45 185.3 103 88.3
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 9.2e-45 183.3 103 87.4
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 2.0e-44 182.2 103 86.4
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 2.7e-44 181.8 103 87.4
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 3.5e-44 181.4 103 85.4
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 4.6e-44 181.0 105 86.7
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 4.6e-44 181.0 105 86.7
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 6.0e-44 180.6 103 84.5
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 1.0e-43 179.9 103 87.4
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 3.0e-43 178.3 103 84.5
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 8.6e-43 176.8 103 85.4
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 8.6e-43 176.8 103 85.4
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 4.3e-42 174.5 102 86.3
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.6e-42 174.1 103 83.5
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.6e-42 174.1 103 83.5
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 1.6e-41 172.6 100 84.0
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.1e-40 169.9 103 83.5
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.1e-40 169.9 103 83.5
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 1.1e-40 169.9 103 83.5
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 1.1e-40 169.9 103 83.5
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.3e-40 168.7 90 91.1
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 82.5
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.2e-39 166.4 103 80.6
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 1.2e-39 166.4 94 81.9
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 3.7e-38 161.4 103 81.6
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 4.1e-37 157.9 103 77.7
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 2.1e-36 155.6 103 73.8
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 2.1e-36 155.6 103 73.8
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 2.1e-36 155.6 103 73.8
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 2.1e-36 155.6 103 73.8
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 2.1e-36 155.6 103 73.8
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 2.1e-36 155.6 103 73.8
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 2.1e-36 155.6 103 73.8
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 2.1e-36 155.6 103 73.8
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 2.3e-35 152.1 86 81.4
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 9.5e-34 146.7 77 92.2
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.5e-31 139.4 103 70.9
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 7.5e-31 137.1 76 85.5
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 1.4e-29 132.9 65 100.0
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 5.4e-29 131.0 101 64.4
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 4.6e-28 127.9 71 87.3
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 6.0e-28 127.5 83 77.1
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 6.0e-28 127.5 107 62.6
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 1.0e-27 126.7 93 71.0
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 1.0e-27 126.7 66 90.9
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.3e-27 125.6 83 75.9
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 1.1e-24 116.7 83 66.3
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 1.5e-23 112.8 64 84.4
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 1.3e-22 109.8 78 67.9
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 2.2e-22 109.0 78 66.7
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 9.2e-21 103.6 73 68.5
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 1.2e-20 103.2 61 83.6
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.1e-20 102.4 63 81.0
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 6.0e-20 100.9 75 69.3
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 7.8e-20 100.5 56 87.5
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 8.7e-19 97.1 58 84.5
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.1e-18 96.7 51 90.2
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 5.6e-18 94.4 49 93.9
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.8e-17 92.0 55 78.2
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 4.8e-17 91.3 50 88.0
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 1.4e-16 89.7 56 78.6
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 1.4e-16 89.7 56 78.6
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 1.4e-16 89.7 56 78.6
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 1.8e-16 89.4 49 87.8
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 1.8e-16 89.4 50 84.0
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.1e-16 88.6 49 85.7
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 4.0e-16 88.2 42 95.2
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 2.0e-15 85.9 45 88.9
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 2.0e-15 85.9 45 88.9
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 2.0e-15 85.9 45 88.9
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 2.0e-15 85.9 45 88.9
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 1.3e-14 83.2 98 53.1
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 2.4e-13 79.0 50 76.0
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 1.2e-12 76.6 58 72.4
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.6e-12 76.3 37 97.3
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 2.1e-12 75.9 52 69.2
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 1.7e-11 72.8 93 50.5
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.9e-10 69.3 34 91.2
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 9.6e-10 67.0 101 40.6
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 9.6e-10 67.0 101 40.6
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 1.1e-08 63.5 33 90.9
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.4e-08 62.4 30 96.7


User provided reference genes

Program Settings