Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1448.1 Capsicum annuum HOM05D012514 ORTHO05D000593 5.2e-81 304.3 149 100.0
CAN.G1119.13 Capsicum annuum HOM05D000336 ORTHO05D000593 5.1e-36 154.8 152 57.2
CAN.G639.15 Capsicum annuum HOM05D035774 ORTHO05D115614 3.3e-19 99.0 64 76.6
CAN.G639.14 Capsicum annuum HOM05D012514 ORTHO05D114937 7.3e-19 97.8 77 64.9
Nitab4.5_0000383g0340 Nicotiana tabacum HOM05D000336 ORTHO05D000593 1.3e-18 97.1 92 57.6
Peaxi162Scf00027g00057 Petunia axillaris HOM05D000336 ORTHO05D000593 1.3e-18 97.1 92 54.3
Nitab4.5_0001208g0040 Nicotiana tabacum HOM05D000336 ORTHO05D000593 3.6e-18 95.5 92 57.6
PGSC0003DMG400015378 Solanum tuberosum HOM05D000336 ORTHO05D000593 8.4e-15 84.3 92 47.8
Solyc12g014170.2 Solanum lycopersicum HOM05D000336 ORTHO05D000593 1.4e-14 83.6 92 46.7
Peaxi162Scf01503g00017 Petunia axillaris HOM05D000336 ORTHO05D000593 3.2e-14 82.4 93 47.3
Solyc07g062660.4 Solanum lycopersicum HOM05D000336 ORTHO05D000593 4.2e-14 82.0 87 47.1
Sopen07g030890 Solanum pennellii HOM05D000336 ORTHO05D000593 4.2e-14 82.0 87 47.1
Sopen12g005960 Solanum pennellii HOM05D000336 ORTHO05D000593 5.4e-14 81.6 92 46.7
PGSC0003DMG401012433 Solanum tuberosum HOM05D000336 ORTHO05D000593 7.1e-14 81.3 87 47.1
CAN.G1123.1 Capsicum annuum HOM05D000336 ORTHO05D000593 1.2e-13 80.5 89 46.1
Migut.H01976 Erythranthe guttata HOM05D000336 ORTHO05D000593 4.6e-13 78.6 90 46.7
MSTRG.12880 Avicennia marina HOM05D000336 ORTHO05D000593 1.8e-12 76.6 89 48.3
Migut.M00746 Erythranthe guttata HOM05D000336 ORTHO05D000593 3.0e-12 75.9 122 37.7
Oeu051113.2 Olea europaea HOM05D000336 ORTHO05D000593 3.9e-12 75.5 87 48.3
EL10Ac4g08319 Beta vulgaris HOM05D000336 ORTHO05D000593 5.1e-12 75.1 88 44.3
vmacro09503 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 8.7e-12 74.3 86 48.8
CSS0050350 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 1.5e-11 73.6 87 49.4
Lj1P833T44 Lonicera japonica HOM05D000336 ORTHO05D000593 1.5e-11 73.6 75 50.7
SGA_v2.0_scaffold130G34319 Striga asiatica HOM05D000336 ORTHO05D000593 1.5e-11 73.6 87 46.0
SalBow7G0624 Salvia bowleyana HOM05D000336 ORTHO05D000593 1.9e-11 73.2 91 46.2
unitig_0.g2271 Utricularia gibba HOM05D000336 ORTHO05D000593 2.5e-11 72.8 78 50.0
DCAR_013143 Daucus carota HOM05D000336 ORTHO05D000593 3.3e-11 72.4 89 44.9
Nitab4.5_0005440g0060 Nicotiana tabacum HOM05D000336 ORTHO05D000593 3.3e-11 72.4 63 57.1
vmacro11909 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 3.3e-11 72.4 110 42.7
Rhsim04G0024500 Rhododendron simsii HOM05D000336 ORTHO05D000593 4.3e-11 72.0 86 46.5
Cc02_g32330 Coffea canephora HOM05D000336 ORTHO05D000593 7.4e-11 71.2 81 48.1
Cc05_g11400 Coffea canephora HOM05D000336 ORTHO05D000593 7.4e-11 71.2 81 48.1
Actinidia18790 Actinidia chinensis HOM05D000336 ORTHO05D000593 9.6e-11 70.9 99 45.5
Dinv14967 Davidia involucrata HOM05D000336 ORTHO05D000593 9.6e-11 70.9 112 42.9
Lsat_1_v5_gn_7_103240 Lactuca sativa HOM05D000336 ORTHO05D000593 9.6e-11 70.9 77 46.8
CAN.G162.22 Capsicum annuum HOM05D000336 ORTHO05D000593 1.3e-10 70.5 90 43.3
CSS0015418 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 1.6e-10 70.1 87 49.4
MSTRG.14953 Avicennia marina HOM05D000336 ORTHO05D000593 2.8e-10 69.3 82 45.1
CAN.G639.12 Capsicum annuum HOM05D035774 ORTHO05D115243 4.8e-10 68.6 91 46.2
HanXRQChr11g0331341 Helianthus annuus HOM05D000336 ORTHO05D000593 6.2e-10 68.2 94 39.4
HanXRQChr17g0548891 Helianthus annuus HOM05D000336 ORTHO05D000593 6.2e-10 68.2 70 50.0
Lj8P151T33 Lonicera japonica HOM05D000336 ORTHO05D000593 6.2e-10 68.2 75 46.7
AUR62019541 Chenopodium quinoa HOM05D000336 ORTHO05D000593 8.1e-10 67.8 89 43.8
Ah.04g164370 Amaranthus hybridus HOM05D000336 ORTHO05D000593 1.8e-09 66.6 89 41.6
Oeu025339.3 Olea europaea HOM05D000336 ORTHO05D000593 2.4e-09 66.2 80 45.0
HanXRQChr15g0494691 Helianthus annuus HOM05D000336 ORTHO05D000593 3.1e-09 65.9 92 42.4
Lsat_1_v5_gn_9_99621 Lactuca sativa HOM05D000336 ORTHO05D000593 3.1e-09 65.9 85 37.6
Rhsim06G0205200 Rhododendron simsii HOM05D000336 ORTHO05D000593 5.3e-09 65.1 87 46.0
Actinidia35222 Actinidia chinensis HOM05D000336 ORTHO05D000593 6.9e-09 64.7 75 50.7
AUR62036096 Chenopodium quinoa HOM05D000336 ORTHO05D000593 6.9e-09 64.7 80 45.0
Dinv18345 Davidia involucrata HOM05D000336 ORTHO05D000593 6.9e-09 64.7 87 44.8
unitig_52.g17398 Utricularia gibba HOM05D000336 ORTHO05D000593 6.9e-09 64.7 78 43.6
Actinidia31605 Actinidia chinensis HOM05D000336 ORTHO05D000593 1.2e-08 63.9 77 40.3
Ah.06g185150 Amaranthus hybridus HOM05D000336 ORTHO05D000593 2.0e-08 63.2 121 36.4
Dinv03921 Davidia involucrata HOM05D000336 ORTHO05D000593 3.4e-08 62.4 110 36.4
Peaxi162Scf00069g02023 Petunia axillaris HOM05D000336 ORTHO05D000593 4.5e-08 62.0 94 39.4
QL08p041317 Quercus lobata HOM05D000336 ORTHO05D000593 4.5e-08 62.0 107 33.6
ECA236G0678 Erigeron canadensis HOM05D000336 ORTHO05D000593 5.8e-08 61.6 77 44.2
ECA240G2711 Erigeron canadensis HOM05D000336 ORTHO05D000593 7.6e-08 61.2 71 45.1
Thhalv10006830m.g Eutrema salsugineum HOM05D000336 ORTHO05D000593 7.6e-08 61.2 115 38.3
PSO541G0614 Papaver somniferum HOM05D000336 ORTHO05D000593 7.6e-08 61.2 85 45.9
PSO675G2919 Papaver somniferum HOM05D000336 ORTHO05D000593 7.6e-08 61.2 85 45.9
CDE10G0328 Ceratophyllum demersum HOM05D000336 ORTHO05D000593 9.9e-08 60.8 87 40.2
Potri.019G090700 Populus trichocarpa HOM05D000336 ORTHO05D000593 9.9e-08 60.8 118 34.7
CDE10G0923 Ceratophyllum demersum HOM05D000336 ORTHO05D000593 1.3e-07 60.5 90 40.0
Hund02249 Selenicereus undatus HOM05D000336 ORTHO05D000593 1.3e-07 60.5 78 39.7
Sc03g0010390 Simmondsia chinensis HOM05D000336 ORTHO05D000593 1.3e-07 60.5 81 40.7
DCAR_021014 Daucus carota HOM05D000336 ORTHO05D000593 1.7e-07 60.1 69 43.5
Sabra19G0104300 Salix brachista HOM05D000336 ORTHO05D000593 1.7e-07 60.1 106 37.7
AT1G06230 Arabidopsis thaliana HOM05D000336 ORTHO05D000593 2.2e-07 59.7 100 43.0
BcaC05g24292 Brassica carinata HOM05D000336 ORTHO05D000593 2.2e-07 59.7 114 36.8
C05p04550 Brassica napus HOM05D000336 ORTHO05D000593 2.2e-07 59.7 114 36.8
Duzib213G0612 Durio zibethinus HOM05D000336 ORTHO05D000593 4.9e-07 58.5 99 38.4
AL1G16220 Arabidopsis lyrata HOM05D000336 ORTHO05D000593 6.4e-07 58.2 115 37.4
CARHR005770 Cardamine hirsuta HOM05D000336 ORTHO05D000593 8.4e-07 57.8 115 37.4
Dinv15466 Davidia involucrata HOM05D000336 ORTHO05D000593 8.4e-07 57.8 77 37.7
Thecc.07G104700 Theobroma cacao HOM05D000336 ORTHO05D000593 1.1e-06 57.4 69 46.4
Carub.0001s0559 Capsella rubella HOM05D000336 ORTHO05D000593 1.4e-06 57.0 115 37.4
CiPaw.03G185600 Carya illinoinensis HOM05D000336 ORTHO05D000593 1.4e-06 57.0 99 34.3
Gohir.A05G373600 Gossypium hirsutum HOM05D000336 ORTHO05D000593 1.4e-06 57.0 79 41.8
Gohir.D04G042000 Gossypium hirsutum HOM05D000336 ORTHO05D000593 1.4e-06 57.0 79 40.5
Lj3g0006084 Lotus japonicus HOM05D000336 ORTHO05D000593 1.4e-06 57.0 125 32.0
Cc05_g08080 Coffea canephora HOM05D000336 ORTHO05D000593 1.9e-06 56.6 91 38.5
Manes.13G138700 Manihot esculenta HOM05D000336 ORTHO05D000593 1.9e-06 56.6 116 36.2
Sp1g05040 Schrenkiella parvula HOM05D000336 ORTHO05D000593 1.9e-06 56.6 115 35.7
BolC8t47035H Brassica oleracea HOM05D000336 ORTHO05D000593 2.4e-06 56.2 112 34.8
CiPaw.04G131400 Carya illinoinensis HOM05D000336 ORTHO05D000593 2.4e-06 56.2 87 37.9
Potri.013G118900 Populus trichocarpa HOM05D000336 ORTHO05D000593 2.4e-06 56.2 78 37.2
A09p67060 Brassica napus HOM05D000336 ORTHO05D000593 3.2e-06 55.8 109 36.7
Cpa.g.sc209.24 Carica papaya HOM05D000336 ORTHO05D000593 3.2e-06 55.8 78 41.0
ClCG09G011350 Citrullus lanatus HOM05D000336 ORTHO05D000593 3.2e-06 55.8 82 41.5
Hma1.2p1_0002F.1_g002640 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 3.2e-06 55.8 80 40.0
Hma1.2p1_0002F.1_g002650 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 3.2e-06 55.8 80 40.0
Hma1.2p1_0178F.1_g079043 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 3.2e-06 55.8 80 40.0
THA.LOC104800865 Tarenaya hassleriana HOM05D000336 ORTHO05D000593 3.2e-06 55.8 100 40.0
BcaB03g13428 Brassica carinata HOM05D000336 ORTHO05D000593 4.2e-06 55.5 110 36.4
C08p02440 Brassica napus HOM05D007190 ORTHO05D009130 4.2e-06 55.5 112 34.8
Gohir.A05G373800 Gossypium hirsutum HOM05D000336 ORTHO05D000593 4.2e-06 55.5 79 39.2
Phvul.005G096700 Phaseolus vulgaris HOM05D000336 ORTHO05D000593 4.2e-06 55.5 77 39.0
Sabra13G0100300 Salix brachista HOM05D000336 ORTHO05D000593 4.2e-06 55.5 78 37.2
Hund02245 Selenicereus undatus HOM05D000336 ORTHO05D000593 4.2e-06 55.5 112 37.5
BcaB02g06812 Brassica carinata HOM05D000336 ORTHO05D000593 5.5e-06 55.1 114 36.8
Glyma.13G292200 Glycine max HOM05D000336 ORTHO05D000593 5.5e-06 55.1 78 38.5
Gorai.012G047300 Gossypium raimondii HOM05D000336 ORTHO05D000593 5.5e-06 55.1 79 39.2
Actinidia30445 Actinidia chinensis HOM05D000336 ORTHO05D000593 7.1e-06 54.7 78 38.5
A08p36070 Brassica napus HOM05D007190 ORTHO05D009130 7.1e-06 54.7 112 34.8
BraA08t35514Z Brassica rapa HOM05D000336 ORTHO05D000593 7.1e-06 54.7 112 34.8
BraA09t42040Z Brassica rapa HOM05D000336 ORTHO05D000593 7.1e-06 54.7 109 35.8
Gohir.D04G041800 Gossypium hirsutum HOM05D000336 ORTHO05D000593 7.1e-06 54.7 72 41.7
Gohir.D04G041900 Gossypium hirsutum HOM05D000336 ORTHO05D000593 7.1e-06 54.7 75 45.3
Gorai.012G047100 Gossypium raimondii HOM05D000336 ORTHO05D000593 7.1e-06 54.7 72 41.7
Gorai.012G047200 Gossypium raimondii HOM05D000336 ORTHO05D000593 7.1e-06 54.7 79 40.5
Rhsim04G0073400 Rhododendron simsii HOM05D000336 ORTHO05D000593 7.1e-06 54.7 116 33.6
vmacro09231 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 7.1e-06 54.7 116 33.6
AUR62037389 Chenopodium quinoa HOM05D000336 ORTHO05D000593 9.3e-06 54.3 114 36.8
ClCG02G017980 Citrullus lanatus HOM05D000336 ORTHO05D000593 9.3e-06 54.3 63 41.3
Sed0017505 Sechium edule HOM05D000336 ORTHO05D000593 9.3e-06 54.3 86 40.7


User provided reference genes

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