Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1406.1 Capsicum annuum HOM05D002705 ORTHO05D004955 1.2e-294 1015.8 531 100.0
CAN.G1654.2 Capsicum annuum HOM05D002705 ORTHO05D004955 2.9e-219 765.4 433 93.5
CAN.G408.1 Capsicum annuum HOM05D002705 ORTHO05D004955 7.0e-96 355.5 231 78.8
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 2.9e-86 323.6 277 62.8
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 2.9e-86 323.6 277 62.8
CAN.G1654.1 Capsicum annuum HOM05D002705 ORTHO05D004955 5.5e-85 319.3 165 95.8
Nitab4.5_0000103g0340 Nicotiana tabacum HOM05D002705 ORTHO05D004955 1.8e-83 314.3 264 63.6
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 4.4e-82 309.7 257 64.2
Peaxi162Scf00073g01729 Petunia axillaris HOM05D002705 ORTHO05D004955 2.2e-73 280.8 257 59.9
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 7.3e-69 265.8 250 55.2
MSTRG.8400 Avicennia marina HOM05D002705 ORTHO05D004955 2.3e-67 260.8 230 58.3
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 4.0e-67 260.0 250 53.6
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 1.5e-66 258.1 250 56.4
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 4.4e-66 256.5 230 56.5
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 5.7e-66 256.1 263 51.7
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 6.4e-65 252.7 231 57.6
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 1.7e-62 244.6 250 50.8
Hma1.2p1_2119F.1_g314370 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 6.6e-62 242.7 231 56.3
CSS0042603 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D004955 8.6e-62 242.3 227 55.9
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 1.9e-61 241.1 292 46.6
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 3.3e-61 240.4 261 48.7
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 5.6e-61 239.6 263 48.7
Lj8C49G2 Lonicera japonica HOM05D002705 ORTHO05D004955 5.6e-61 239.6 231 54.5
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 5.6e-61 239.6 251 51.8
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 9.5e-61 238.8 231 54.1
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 9.5e-61 238.8 283 47.3
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 1.2e-60 238.4 233 53.6
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 2.1e-60 237.7 263 48.7
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 4.7e-60 236.5 263 49.4
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 4.7e-60 236.5 263 50.2
unitig_578.g16613 Utricularia gibba HOM05D002705 ORTHO05D004955 6.2e-60 236.1 191 58.6
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 8.0e-60 235.7 231 54.1
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 2.3e-59 234.2 229 53.7
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 3.1e-59 233.8 231 54.1
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 4.0e-59 233.4 250 52.4
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 4.0e-59 233.4 231 53.2
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 4.0e-59 233.4 264 49.2
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 5.2e-59 233.0 263 47.9
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 2.0e-58 231.1 231 53.7
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.0e-58 231.1 231 53.7
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 3.4e-58 230.3 246 50.4
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 4.4e-58 229.9 227 54.2
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 5.8e-58 229.6 251 49.4
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 5.8e-58 229.6 227 54.2
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 5.8e-58 229.6 228 53.9
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 9.8e-58 228.8 263 47.5
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.7e-57 228.0 231 53.2
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 2.2e-57 227.6 227 53.7
ECA232G4016 Erigeron canadensis HOM05D002705 ORTHO05D004955 2.9e-57 227.3 232 51.7
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 2.9e-57 227.3 227 51.5
MD07G1245700 Malus domestica HOM05D002705 ORTHO05D004955 3.7e-57 226.9 247 51.4
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 4.9e-57 226.5 248 49.2
Manes.14G040900 Manihot esculenta HOM05D002705 ORTHO05D004955 6.4e-57 226.1 309 42.4
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 8.3e-57 225.7 249 49.4
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 1.9e-56 224.6 232 52.2
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 2.4e-56 224.2 263 46.0
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 4.1e-56 223.4 228 50.4
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 4.1e-56 223.4 228 50.4
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 5.4e-56 223.0 251 46.6
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 1.6e-55 221.5 256 46.1
AUR62042388 Chenopodium quinoa HOM05D002705 ORTHO05D004955 1.6e-55 221.5 250 48.0
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 2.0e-55 221.1 256 46.1
EL10As1g23078 Beta vulgaris HOM05D002705 ORTHO05D004955 4.6e-55 219.9 248 47.6
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 4.6e-55 219.9 259 45.6
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 4.6e-55 219.9 282 45.0
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 4.6e-55 219.9 282 44.3
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 4.6e-55 219.9 282 44.3
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 4.6e-55 219.9 257 46.3
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 6.0e-55 219.5 257 47.1
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 7.8e-55 219.2 231 52.4
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 7.8e-55 219.2 231 51.1
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 1.0e-54 218.8 228 50.9
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 1.0e-54 218.8 261 47.1
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 1.3e-54 218.4 264 47.3
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 1.7e-54 218.0 256 45.7
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 1.7e-54 218.0 256 45.7
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 5.0e-54 216.5 257 46.7
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 5.0e-54 216.5 282 44.0
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 6.6e-54 216.1 253 46.6
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 8.6e-54 215.7 172 62.8
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 3.3e-53 213.8 255 46.3
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 3.3e-53 213.8 165 63.6
vmacro06848 Vaccinium macrocarpon HOM05D002705 ORTHO05D004955 5.6e-53 213.0 311 42.8
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 7.3e-53 212.6 199 56.8
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 7.3e-53 212.6 227 48.5
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 7.3e-53 212.6 257 45.1
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.2e-52 211.8 168 63.1
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 1.6e-52 211.5 253 45.8
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 3.6e-52 210.3 263 43.0
Ca_09785_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 4.7e-52 209.9 269 43.9
TPR.G18561 Trifolium pratense HOM05D002705 ORTHO05D004955 8.1e-52 209.1 231 48.5
CAN.G1406.2 Capsicum annuum HOM05D002705 ORTHO05D004955 2.3e-51 207.6 362 43.4
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 6.8e-51 206.1 228 48.7
Psat6g140240 Pisum sativum HOM05D002705 ORTHO05D004955 1.5e-50 204.9 231 47.2
Medtr1g072800 Medicago truncatula HOM05D002705 ORTHO05D004955 3.4e-50 203.8 231 47.6
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 9.2e-48 195.7 230 47.0
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 8.6e-46 189.1 232 44.4
Pp3c1_29170 Physcomitrium patens HOM05D002705 ORTHO05D004955 1.1e-45 188.7 255 42.0
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 3.3e-45 187.2 227 47.6
AagrBONN_evm.TU.Sc2ySwM_117.709 Anthoceros agrestis HOM05D002705 ORTHO05D004955 6.2e-44 183.0 234 43.6
SMO263G0015 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.3e-38 165.2 227 39.2
HPP92_027816 Vanilla planifolia HOM05D002705 ORTHO05D004955 3.0e-38 164.1 203 45.3
SMO118G0423 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.3e-33 148.7 227 38.3
AagrBONN_evm.TU.Sc2ySwM_340.578 Anthoceros agrestis HOM05D002705 ORTHO05D004955 3.8e-33 147.1 178 42.7
CAN.G39.14 Capsicum annuum HOM05D005318 ORTHO05D006791 3.1e-27 127.5 126 61.9
COL.COLO4_37311 Corchorus olitorius HOM05D002705 ORTHO05D004955 3.1e-27 127.5 233 36.1
CAN.G1559.3 Capsicum annuum HOM05D000541 ORTHO05D000137 2.9e-25 120.9 107 66.4
FAN01G1045 Fragaria x ananassa HOM05D002705 ORTHO05D004955 3.1e-19 100.9 90 54.4
Sc11g0004220 Simmondsia chinensis HOM05D002705 ORTHO05D004955 5.6e-13 80.1 109 42.2
arahy.Tifrunner.gnm1.ann1.WYM0Y2 Arachis hypogaea HOM05D002705 ORTHO05D004955 1.3e-12 79.0 153 34.0
arahy.Tifrunner.gnm1.ann1.ZG0SUW Arachis hypogaea HOM05D002705 ORTHO05D004955 1.3e-12 79.0 153 34.0
FAN17G2187 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.1e-12 78.2 67 58.2
CBR_g22322 Chara braunii HOM05D000019 ORTHO05D000002 8.4e-09 66.2 256 24.2
AagrBONN_evm.TU.Sc2ySwM_368.2221 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.2e-07 62.4 149 30.9
MCO05G634 Micromonas commoda HOM05D002705 ORTHO05D004955 3.5e-07 60.8 166 28.9
SEGI_13522 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 1.8e-06 58.5 120 32.5
AagrBONN_evm.TU.Sc2ySwM_362.2714 Anthoceros agrestis HOM05D002705 ORTHO05D004955 6.7e-06 56.6 193 25.9


User provided reference genes

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