Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G140.21 Capsicum annuum HOM05D000747 ORTHO05D011388 7.4e-65 250.4 125 100.0
Nitab4.5_0004583g0110 Nicotiana tabacum HOM05D000747 ORTHO05D001683 2.2e-32 142.5 84 86.9
Nitab4.5_0007779g0030 Nicotiana tabacum HOM05D000747 ORTHO05D001683 2.2e-32 142.5 84 86.9
CAN.G623.17 Capsicum annuum HOM05D000747 ORTHO05D001683 2.8e-32 142.1 84 86.9
Sopen07g033840 Solanum pennellii HOM05D000747 ORTHO05D001683 4.1e-31 138.3 84 84.5
Lj1C891T9 Lonicera japonica HOM05D000747 ORTHO05D001683 2.9e-29 132.1 84 79.8
Ciclev10007219m.g Citrus clementina HOM05D000747 ORTHO05D001683 1.5e-28 129.8 84 78.6
Oeu005956.1 Olea europaea HOM05D000747 ORTHO05D001683 1.9e-28 129.4 84 79.8
QL08p003927 Quercus lobata HOM05D000747 ORTHO05D001683 4.3e-28 128.3 84 77.4
Lj3C755T2 Lonicera japonica HOM05D000747 ORTHO05D001683 7.3e-28 127.5 84 77.4
Dinv10345 Davidia involucrata HOM05D000747 ORTHO05D001683 1.2e-27 126.7 84 76.2
Nn1g03156 Nelumbo nucifera HOM05D000747 ORTHO05D001683 1.2e-27 126.7 84 75.0
Peaxi162Scf00139g00125 Petunia axillaris HOM05D000747 ORTHO05D001683 3.6e-27 125.2 84 79.8
Actinidia35405 Actinidia chinensis HOM05D000747 ORTHO05D001683 4.7e-27 124.8 84 76.2
Dinv40863 Davidia involucrata HOM05D000747 ORTHO05D001683 6.1e-27 124.4 84 76.2
Prupe.6G024400 Prunus persica HOM05D000747 ORTHO05D001683 6.1e-27 124.4 84 75.0
Cfa016908 Carpinus fangiana HOM05D000747 ORTHO05D001683 8.0e-27 124.0 84 73.8
Haze_09836 Corylus avellana HOM05D000747 ORTHO05D001683 8.0e-27 124.0 84 73.8
FvH4_3g42950 Fragaria vesca HOM05D000747 ORTHO05D001683 8.0e-27 124.0 84 75.0
FAN16G1947 Fragaria x ananassa HOM05D000747 ORTHO05D001683 8.0e-27 124.0 84 75.0
FAN25G0789 Fragaria x ananassa HOM05D000747 ORTHO05D001683 8.0e-27 124.0 84 75.0
PGR083G1157 Punica granatum HOM05D000747 ORTHO05D001683 8.0e-27 124.0 84 75.0
Cc05_g15020 Coffea canephora HOM05D000747 ORTHO05D001683 1.0e-26 123.6 84 76.2
Duzib268G0898 Durio zibethinus HOM05D000747 ORTHO05D001683 1.4e-26 123.2 84 75.0
Sabra16G0241700 Salix brachista HOM05D000747 ORTHO05D001683 1.4e-26 123.2 84 75.0
CiPaw.11G204500 Carya illinoinensis HOM05D000747 ORTHO05D001683 1.8e-26 122.9 84 71.4
ClCG10G004420 Citrullus lanatus HOM05D000747 ORTHO05D001683 1.8e-26 122.9 84 75.0
MELO3C014115.2 Cucumis melo HOM05D000747 ORTHO05D001683 1.8e-26 122.9 84 75.0
CsaV3_3G004200 Cucumis sativus L. HOM05D000747 ORTHO05D001683 1.8e-26 122.9 84 75.0
Potri.011G094100 Populus trichocarpa HOM05D000747 ORTHO05D001683 1.8e-26 122.9 84 72.6
TWI38G2292 Tripterygium wilfordii HOM05D000747 ORTHO05D001683 1.8e-26 122.9 84 72.6
CSS0022525 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 2.3e-26 122.5 84 75.0
FAN11G2391 Fragaria x ananassa HOM05D000747 ORTHO05D001683 2.3e-26 122.5 84 73.8
FAN21G2236 Fragaria x ananassa HOM05D000747 ORTHO05D001683 2.3e-26 122.5 84 75.0
MD03G1027100 Malus domestica HOM05D000747 ORTHO05D001683 2.3e-26 122.5 84 75.0
Nn1g07530 Nelumbo nucifera HOM05D000747 ORTHO05D001683 2.3e-26 122.5 84 75.0
Thecc.07G012100 Theobroma cacao HOM05D000747 ORTHO05D001683 2.3e-26 122.5 84 73.8
TAR624G0765 Trochodendron aralioides HOM05D000747 ORTHO05D001683 3.0e-26 122.1 84 73.8
Manes.15G059000 Manihot esculenta HOM05D000747 ORTHO05D001683 4.0e-26 121.7 84 73.8
Duzib213G0084 Durio zibethinus HOM05D000747 ORTHO05D001683 5.2e-26 121.3 84 73.8
Oeu005482.1 Olea europaea HOM05D000747 ORTHO05D001683 5.2e-26 121.3 84 77.4
Potri.001G368600 Populus trichocarpa HOM05D000747 ORTHO05D001683 5.2e-26 121.3 84 72.6
Sed0017501 Sechium edule HOM05D000747 ORTHO05D001683 6.8e-26 120.9 84 72.6
Hund23101 Selenicereus undatus HOM05D000747 ORTHO05D001683 8.9e-26 120.6 84 75.0
Gohir.A01G092100 Gossypium hirsutum HOM05D000747 ORTHO05D001683 1.2e-25 120.2 84 71.4
Gohir.D01G062300 Gossypium hirsutum HOM05D000747 ORTHO05D001683 1.2e-25 120.2 84 71.4
RcHm_v2.0_Chr5g0077001 Rosa chinensis HOM05D000747 ORTHO05D001683 1.2e-25 120.2 84 75.0
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 1.5e-25 119.8 84 71.4
CSS0037654 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 1.5e-25 119.8 84 71.4
TWI38G1048 Tripterygium wilfordii HOM05D000747 ORTHO05D001683 1.5e-25 119.8 84 70.2
COL.COLO4_09844 Corchorus olitorius HOM05D000747 ORTHO05D001683 2.0e-25 119.4 84 72.6
ECA240G4674 Erigeron canadensis HOM05D000747 ORTHO05D001683 2.0e-25 119.4 84 72.6
MD11G1031000 Malus domestica HOM05D000747 ORTHO05D001683 2.0e-25 119.4 84 73.8
TAR626G0075 Trochodendron aralioides HOM05D000747 ORTHO05D001683 2.0e-25 119.4 84 73.8
EL10Ac4g07551 Beta vulgaris HOM05D000747 ORTHO05D001683 2.6e-25 119.0 84 72.6
AUR62017118 Chenopodium quinoa HOM05D000747 ORTHO05D001683 2.6e-25 119.0 84 72.6
AUR62036471 Chenopodium quinoa HOM05D000747 ORTHO05D001683 2.6e-25 119.0 84 72.6
Gorai.002G100900 Gossypium raimondii HOM05D000747 ORTHO05D001683 2.6e-25 119.0 84 70.2
HanXRQChr03g0073991 Helianthus annuus HOM05D000747 ORTHO05D001683 2.6e-25 119.0 84 72.6
HanXRQChr13g0408401 Helianthus annuus HOM05D000747 ORTHO05D001683 2.6e-25 119.0 84 71.4
Rhsim04G0012200 Rhododendron simsii HOM05D000747 ORTHO05D001683 2.6e-25 119.0 84 72.6
vmacro09645 Vaccinium macrocarpon HOM05D000747 ORTHO05D001683 3.4e-25 118.6 84 72.6
CiPaw.12G138800 Carya illinoinensis HOM05D000747 ORTHO05D001683 4.4e-25 118.2 87 69.0
arahy.Tifrunner.gnm1.ann1.62V247 Arachis hypogaea HOM05D000747 ORTHO05D001683 5.8e-25 117.9 84 72.6
arahy.Tifrunner.gnm1.ann1.7NI5NY Arachis hypogaea HOM05D000747 ORTHO05D001683 5.8e-25 117.9 84 72.6
MSTRG.7001 Avicennia marina HOM05D000747 ORTHO05D001683 5.8e-25 117.9 84 76.2
Thhalv10011171m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 9.8e-25 117.1 84 69.0
Sc03g0011480 Simmondsia chinensis HOM05D000747 ORTHO05D001683 9.8e-25 117.1 84 72.6
Aa31LG10G330 Aethionema arabicum HOM05D000747 ORTHO05D001683 1.3e-24 116.7 84 69.0
DCAR_017075 Daucus carota HOM05D000747 ORTHO05D001683 2.9e-24 115.5 84 73.8
Eucgr.F02042 Eucalyptus grandis HOM05D000747 ORTHO05D001683 2.9e-24 115.5 84 72.6
Sp1g41460 Schrenkiella parvula HOM05D000747 ORTHO05D001683 2.9e-24 115.5 84 69.0
Cpa.g.sc959.1 Carica papaya HOM05D000747 ORTHO05D001683 3.7e-24 115.2 84 69.0
PSO541G0267 Papaver somniferum HOM05D000747 ORTHO05D001683 3.7e-24 115.2 85 69.4
PSO675G3434 Papaver somniferum HOM05D000747 ORTHO05D001683 3.7e-24 115.2 85 69.4
unitig_62.g23304 Utricularia gibba HOM05D000747 ORTHO05D001683 3.7e-24 115.2 84 73.8
GSVIVG01014698001 Vitis vinifera HOM05D000747 ORTHO05D001683 3.7e-24 115.2 84 70.2
CANSAT11G0765 Cannabis sativa HOM05D000747 ORTHO05D001683 8.3e-24 114.0 85 71.8
SGA_v2.0_scaffold171G38855 Striga asiatica HOM05D000747 ORTHO05D001683 8.3e-24 114.0 84 72.6
Atru.chr2.3699 Acer truncatum HOM05D000747 ORTHO05D001683 1.1e-23 113.6 85 69.4
Lj4g0006906 Lotus japonicus HOM05D000747 ORTHO05D001683 1.1e-23 113.6 84 70.2
Lsat_1_v5_gn_9_88720 Lactuca sativa HOM05D000747 ORTHO05D001683 1.4e-23 113.2 85 70.6
Ah.06g181550 Amaranthus hybridus HOM05D000747 ORTHO05D001683 1.9e-23 112.8 84 69.0
Thhalv10011172m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 1.9e-23 112.8 84 66.7
CARHR045560 Cardamine hirsuta HOM05D000747 ORTHO05D001683 2.4e-23 112.5 84 66.7
Glyma.05G133100 Glycine max HOM05D000747 ORTHO05D001683 2.4e-23 112.5 84 69.0
SalBow8G3694 Salvia bowleyana HOM05D000747 ORTHO05D001683 3.2e-23 112.1 84 72.6
SalBow8G4314 Salvia bowleyana HOM05D000747 ORTHO05D001683 3.2e-23 112.1 84 72.6
Phvul.002G189700 Phaseolus vulgaris HOM05D000747 ORTHO05D001683 4.1e-23 111.7 84 69.0
SGA_v2.0_scaffold168G38567 Striga asiatica HOM05D000747 ORTHO05D001683 9.2e-23 110.5 84 72.6
AL1G63980 Arabidopsis lyrata HOM05D000747 ORTHO05D001683 1.2e-22 110.2 85 67.1
AT1G55860 Arabidopsis thaliana HOM05D000747 ORTHO05D001683 1.2e-22 110.2 85 67.1
Glyma.08G087600 Glycine max HOM05D000747 ORTHO05D001683 1.2e-22 110.2 84 67.9
Migut.M01647 Erythranthe guttata HOM05D000747 ORTHO05D001683 1.6e-22 109.8 84 69.0
Lalb_Chr12g0209101 Lupinus albus HOM05D000747 ORTHO05D001683 1.6e-22 109.8 85 70.6
BcaB05g23932 Brassica carinata HOM05D000747 ORTHO05D001683 3.5e-22 108.6 84 65.5
THA.LOC104815693 Tarenaya hassleriana HOM05D000747 ORTHO05D001683 1.0e-21 107.1 84 65.5
Psat7g085720 Pisum sativum HOM05D000747 ORTHO05D001683 1.3e-21 106.7 84 67.9
Ca_18244_v3 Cicer arietinum L. HOM05D000747 ORTHO05D001683 1.7e-21 106.3 84 67.9
Carub.0001s4443 Capsella rubella HOM05D000747 ORTHO05D001683 3.0e-21 105.5 85 65.9
Medtr4g094708 Medicago truncatula HOM05D000747 ORTHO05D001683 3.9e-21 105.1 84 66.7
Lalb_Chr07g0188331 Lupinus albus HOM05D000747 ORTHO05D001683 5.0e-21 104.8 85 65.9
Psat0s2502g0120 Pisum sativum HOM05D000747 ORTHO05D001683 8.6e-21 104.0 84 67.9
Medtr4g094705 Medicago truncatula HOM05D000747 ORTHO05D001683 1.1e-20 103.6 84 65.5
Ca_18240_v3 Cicer arietinum L. HOM05D000747 ORTHO05D001683 1.9e-20 102.8 84 65.5
AT1G70320 Arabidopsis thaliana HOM05D000747 ORTHO05D001683 2.1e-19 99.4 85 63.5
CDE05G0803 Ceratophyllum demersum HOM05D000747 ORTHO05D001683 1.4e-18 96.7 84 59.5
THA.LOC104822729 Tarenaya hassleriana HOM05D000747 ORTHO05D001683 3.1e-18 95.5 84 61.9
BraSC56t46399Z Brassica rapa HOM05D000747 ORTHO05D001683 4.9e-16 88.2 84 59.5
ECA236G3808 Erigeron canadensis HOM05D000747 ORTHO05D001683 1.0e-13 80.5 84 50.0
CAN.G327.8 Capsicum annuum HOM05D000747 ORTHO05D004659 3.3e-12 75.5 41 87.8
Os09g0252800 Oryza sativa ssp. japonica HOM05D000747 ORTHO05D001683 4.3e-12 75.1 85 55.3
SEGI_19221 Sequoiadendron giganteum HOM05D000747 ORTHO05D001683 8.1e-11 70.9 87 40.2
Zm00001eb094520 Zea mays HOM05D000747 ORTHO05D001683 1.8e-10 69.7 84 52.4
HPP92_023770 Vanilla planifolia HOM05D000747 ORTHO05D001683 2.3e-10 69.3 85 49.4
Pp3c11_25020 Physcomitrium patens HOM05D000747 ORTHO05D001683 1.3e-08 63.5 92 42.4
Pp3c7_8070 Physcomitrium patens HOM05D000747 ORTHO05D001683 3.7e-08 62.0 94 40.4
Pp3c7_8076 Physcomitrium patens HOM05D000747 ORTHO05D001683 3.7e-08 62.0 94 40.4
CAN.G79.35 Capsicum annuum HOM05D002324 ORTHO05D011388 1.1e-07 60.5 43 69.8
Mapoly0090s0059 Marchantia polymorpha HOM05D000747 ORTHO05D001683 4.1e-07 58.5 92 43.5
AagrBONN_evm.TU.Sc2ySwM_344.3333 Anthoceros agrestis HOM05D000747 ORTHO05D001683 2.1e-06 56.2 88 36.4


User provided reference genes

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