Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1379.29 Capsicum annuum HOM05D001082 ORTHO05D005120 2.2e-199 698.7 351 100.0
Nitab4.5_0000399g0040 Nicotiana tabacum HOM05D001082 ORTHO05D005120 1.0e-135 487.3 424 64.4
Peaxi162Scf00194g00732 Petunia axillaris HOM05D001082 ORTHO05D005120 5.0e-135 485.0 459 58.6
Sopen01g044980 Solanum pennellii HOM05D001082 ORTHO05D005120 6.6e-135 484.6 465 59.4
Nitab4.5_0004090g0140 Nicotiana tabacum HOM05D001082 ORTHO05D005120 8.6e-119 431.0 419 58.2
Solyc01g102550.4 Solanum lycopersicum HOM05D001082 ORTHO05D005120 1.2e-99 367.5 230 81.7
Lj5C310G5 Lonicera japonica HOM05D001082 ORTHO05D005120 2.1e-88 330.1 457 42.2
Dinv24538 Davidia involucrata HOM05D001082 ORTHO05D005120 9.0e-84 314.7 470 39.8
vmacro01638 Vaccinium macrocarpon HOM05D001082 ORTHO05D005120 3.2e-81 306.2 493 38.3
GSVIVG01015912001 Vitis vinifera HOM05D001082 ORTHO05D005120 3.5e-80 302.8 463 38.0
CSS0006928 Camellia sinensis var. sinensis HOM05D001082 ORTHO05D005120 3.9e-79 299.3 470 40.0
Cfa008545 Carpinus fangiana HOM05D001082 ORTHO05D005120 1.6e-77 293.9 467 38.1
CiPaw.02G126600 Carya illinoinensis HOM05D001082 ORTHO05D005120 3.1e-76 289.7 473 37.0
TAR629G2955 Trochodendron aralioides HOM05D001082 ORTHO05D005120 5.3e-76 288.9 467 37.5
Psat6g073960 Pisum sativum HOM05D001082 ORTHO05D005120 5.8e-75 285.4 463 36.3
Actinidia11712 Actinidia chinensis HOM05D001082 ORTHO05D005120 2.2e-74 283.5 419 38.7
TPR.G11274 Trifolium pratense HOM05D001082 ORTHO05D005120 5.5e-73 278.9 455 35.8
MSTRG.5181 Avicennia marina HOM05D001082 ORTHO05D005120 6.1e-72 275.4 467 36.4
Manes.15G096100 Manihot esculenta HOM05D001082 ORTHO05D005120 3.9e-71 272.7 471 36.3
Glyma.13G142200 Glycine max HOM05D001082 ORTHO05D005120 5.1e-71 272.3 468 36.1
Medtr1g063180 Medicago truncatula HOM05D001082 ORTHO05D005120 5.1e-71 272.3 464 35.3
Ca_11506_v3 Cicer arietinum L. HOM05D001082 ORTHO05D005120 8.7e-71 271.6 464 35.6
Nn3g20376 Nelumbo nucifera HOM05D001082 ORTHO05D005120 1.5e-70 270.8 450 35.8
Migut.N00999 Erythranthe guttata HOM05D001082 ORTHO05D005120 2.5e-70 270.0 467 36.6
Lsat_1_v5_gn_7_54700 Lactuca sativa HOM05D001082 ORTHO05D005120 2.5e-70 270.0 457 35.9
SGA_v2.0_scaffold8G04471 Striga asiatica HOM05D001082 ORTHO05D005120 2.5e-70 270.0 442 35.7
Glyma.10G055100 Glycine max HOM05D001082 ORTHO05D005120 1.4e-68 264.2 468 35.5
SalBow1G7939 Salvia bowleyana HOM05D001082 ORTHO05D005120 4.1e-68 262.7 490 34.3
ECA238G2349 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.2e-67 261.2 456 36.0
HanXRQChr14g0452101 Helianthus annuus HOM05D001082 ORTHO05D005120 5.9e-67 258.8 466 34.5
MELO3C020407.2 Cucumis melo HOM05D001082 ORTHO05D005120 7.7e-67 258.5 470 33.4
Phvul.007G218900 Phaseolus vulgaris HOM05D001082 ORTHO05D005120 1.7e-66 257.3 467 34.9
CsaV3_2G011850 Cucumis sativus L. HOM05D001082 ORTHO05D005120 1.1e-65 254.6 470 33.2
Potri.001G078600 Populus trichocarpa HOM05D001082 ORTHO05D005120 1.4e-65 254.2 476 35.3
arahy.Tifrunner.gnm1.ann1.CLUS6A Arachis hypogaea HOM05D001082 ORTHO05D005120 5.5e-65 252.3 433 35.1
Prupe.5G022000 Prunus persica HOM05D001082 ORTHO05D005120 7.2e-65 251.9 476 35.3
PSO782G2901 Papaver somniferum HOM05D001082 ORTHO05D005120 9.4e-65 251.5 473 33.4
Sed0025950 Sechium edule HOM05D001082 ORTHO05D005120 1.2e-64 251.1 469 31.6
MD10G1009800 Malus domestica HOM05D001082 ORTHO05D005120 1.6e-64 250.8 471 35.9
AUR62042820 Chenopodium quinoa HOM05D001082 ORTHO05D005120 3.6e-64 249.6 492 32.7
arahy.Tifrunner.gnm1.ann1.922X53 Arachis hypogaea HOM05D001082 ORTHO05D005120 4.6e-64 249.2 467 32.8
arahy.Tifrunner.gnm1.ann1.Y1BA5Y Arachis hypogaea HOM05D001082 ORTHO05D005120 4.6e-64 249.2 467 32.8
PSO063G6006 Papaver somniferum HOM05D001082 ORTHO05D005120 7.9e-64 248.4 473 33.6
Hma1.2p1_0052F.1_g030140 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 1.4e-63 247.7 209 55.0
EL10Ac6g13928 Beta vulgaris HOM05D001082 ORTHO05D005120 2.3e-63 246.9 470 32.8
Lj5g0014962 Lotus japonicus HOM05D001082 ORTHO05D005120 2.3e-63 246.9 468 34.2
PGR042G2652 Punica granatum HOM05D001082 ORTHO05D005120 5.1e-63 245.7 496 33.5
ECA233G1970 Erigeron canadensis HOM05D001082 ORTHO05D005120 6.7e-63 245.4 461 36.0
DCAR_003267 Daucus carota HOM05D001082 ORTHO05D005120 8.8e-63 245.0 469 35.6
Sc07g0003370 Simmondsia chinensis HOM05D001082 ORTHO05D005120 4.3e-62 242.7 468 32.7
FvH4_6g26400 Fragaria vesca HOM05D001082 ORTHO05D005120 7.4e-62 241.9 456 34.6
Lalb_Chr21g0315021 Lupinus albus HOM05D001082 ORTHO05D005120 2.8e-61 240.0 466 34.1
Aqoxy5G03217 Aquilegia oxysepala HOM05D001082 ORTHO05D005120 1.1e-60 238.0 478 33.3
ECA233G1839 Erigeron canadensis HOM05D001082 ORTHO05D005120 1.1e-60 238.0 453 34.9
FAN05G0906 Fragaria x ananassa HOM05D001082 ORTHO05D005120 1.1e-60 238.0 471 33.8
Rhsim11G0112000 Rhododendron simsii HOM05D001082 ORTHO05D005120 1.1e-60 238.0 238 53.4
RcHm_v2.0_Chr4g0402211 Rosa chinensis HOM05D001082 ORTHO05D005120 1.2e-59 234.6 464 34.3
Ah.03g136660 Amaranthus hybridus HOM05D001082 ORTHO05D005120 7.7e-59 231.9 512 31.4
CANSAT78G0369 Cannabis sativa HOM05D001082 ORTHO05D005120 1.7e-58 230.7 482 33.6
RcHm_v2.0_Chr2g0126921 Rosa chinensis HOM05D001082 ORTHO05D005120 2.2e-58 230.3 479 33.0
Ciclev10000026m.g Citrus clementina HOM05D001082 ORTHO05D005120 4.7e-56 222.6 466 33.0
TWI14G0841 Tripterygium wilfordii HOM05D001082 ORTHO05D005120 1.8e-55 220.7 475 32.8
TAR339G0004 Trochodendron aralioides HOM05D001082 ORTHO05D005120 4.4e-54 216.1 247 47.0
ECA233G1393 Erigeron canadensis HOM05D001082 ORTHO05D005120 5.7e-54 215.7 501 31.7
ATR0810G183 Amborella trichopoda HOM05D001082 ORTHO05D005120 3.7e-53 213.0 456 30.7
QL10p065261 Quercus lobata HOM05D001082 ORTHO05D005120 2.4e-52 210.3 509 32.0
VMungo0720G1958 Vigna mungo HOM05D001082 ORTHO05D005120 1.2e-51 208.0 218 48.6
A05p24320 Brassica napus HOM05D001082 ORTHO05D005120 6.5e-50 202.2 465 31.2
Cpa.g.sc21.222 Carica papaya HOM05D001082 ORTHO05D005120 6.5e-50 202.2 234 47.4
Sabra01G0055900 Salix brachista HOM05D001082 ORTHO05D005120 6.5e-50 202.2 562 29.7
THA.LOC104806485 Tarenaya hassleriana HOM05D001082 ORTHO05D005120 6.5e-50 202.2 466 30.7
BraA05t21326Z Brassica rapa HOM05D001082 ORTHO05D005120 1.1e-49 201.4 467 31.0
AUR62032513 Chenopodium quinoa HOM05D001082 ORTHO05D005120 1.1e-49 201.4 222 45.5
AL1G47790 Arabidopsis lyrata HOM05D001082 ORTHO05D005120 1.5e-49 201.1 466 29.8
BcaB03g13701 Brassica carinata HOM05D001082 ORTHO05D005120 1.5e-49 201.1 459 31.2
Gorai.007G307100 Gossypium raimondii HOM05D001082 ORTHO05D005120 1.9e-49 200.7 498 31.7
Zm00001eb232140 Zea mays HOM05D001082 ORTHO05D005120 2.5e-49 200.3 468 30.1
Lj3g0009617 Lotus japonicus HOM05D001082 ORTHO05D005120 7.2e-49 198.7 451 31.5
COL.COLO4_31206 Corchorus olitorius HOM05D001082 ORTHO05D005120 1.2e-48 198.0 507 30.6
Thecc.06G064200 Theobroma cacao HOM05D001082 ORTHO05D005120 2.1e-48 197.2 466 32.0
ClCG06G008340 Citrullus lanatus HOM05D001082 ORTHO05D005120 6.1e-48 195.7 234 44.0
Aa31LG6G7920 Aethionema arabicum HOM05D001082 ORTHO05D005120 1.0e-47 194.9 472 29.4
CARHR032850 Cardamine hirsuta HOM05D001082 ORTHO05D005120 1.8e-47 194.1 465 29.9
Sp1g28860 Schrenkiella parvula HOM05D001082 ORTHO05D005120 4.0e-47 193.0 465 29.7
AT1G33410 Arabidopsis thaliana HOM05D001082 ORTHO05D005120 6.7e-47 192.2 470 28.7
Oeu010603.1 Olea europaea HOM05D001082 ORTHO05D005120 1.7e-45 187.6 257 42.8
BcaC05g27806 Brassica carinata HOM05D001082 ORTHO05D005120 3.7e-45 186.4 464 30.4
C05p38080 Brassica napus HOM05D001082 ORTHO05D005120 8.2e-45 185.3 467 30.0
BolC5t32536H Brassica oleracea HOM05D001082 ORTHO05D005120 4.1e-44 183.0 467 29.8
CDE01G0761 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 2.0e-43 180.6 229 41.9
SEGI_00916 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 2.9e-42 176.8 462 29.4
Gohir.D11G284200 Gossypium hirsutum HOM05D001082 ORTHO05D005120 1.5e-41 174.5 438 31.3
MD05G1161300 Malus domestica HOM05D001082 ORTHO05D005120 2.5e-41 173.7 236 42.8
Thhalv10006552m.g Eutrema salsugineum HOM05D001082 ORTHO05D005120 2.0e-38 164.1 464 26.7
SHI21155 Sapria himalayana HOM05D001082 ORTHO05D005120 1.3e-34 151.4 196 41.8
Hma1.2p1_0052F.1_g030150 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 8.5e-34 148.7 100 68.0
Hma1.2p1_0052F.1_g030160 Hydrangea macrophylla HOM05D001082 ORTHO05D005120 8.5e-34 148.7 100 68.0
Duzib235G1067 Durio zibethinus HOM05D001082 ORTHO05D005120 1.5e-33 147.9 364 34.6
Atru.chr12.2421 Acer truncatum HOM05D001082 ORTHO05D005120 1.3e-29 134.8 320 30.3
Gohir.A11G274000 Gossypium hirsutum HOM05D001082 ORTHO05D005120 1.3e-29 134.8 151 48.3
Haze_11087 Corylus avellana HOM05D001082 ORTHO05D005120 1.2e-27 128.3 96 62.5
C04p57470 Brassica napus HOM05D001082 ORTHO05D005120 1.0e-26 125.2 462 26.4
BcaC02g08190 Brassica carinata HOM05D001082 ORTHO05D005120 2.3e-26 124.0 465 26.2
BolC4t27268H Brassica oleracea HOM05D001082 ORTHO05D005120 3.3e-25 120.2 463 25.7
Solyc01g102540.3 Solanum lycopersicum HOM05D001082 ORTHO05D005120 9.5e-25 118.6 63 92.1
Carub.0001s3160 Capsella rubella HOM05D001082 ORTHO05D005120 8.0e-24 115.5 96 55.2
SEGI_20053 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 8.0e-24 115.5 164 42.1
SHI21156 Sapria himalayana HOM05D001082 ORTHO05D005120 6.4e-21 105.9 139 43.2
Eucgr.G00034 Eucalyptus grandis HOM05D001082 ORTHO05D005120 1.1e-20 105.1 101 48.5
CDE01G0790 Ceratophyllum demersum HOM05D001082 ORTHO05D005120 2.7e-19 100.5 92 52.2
unitig_22.g5790 Utricularia gibba HOM05D001082 ORTHO05D005120 2.8e-16 90.5 291 27.8
SEGI_15028 Sequoiadendron giganteum HOM05D001082 ORTHO05D005120 2.3e-15 87.4 96 44.8
AagrBONN_evm.TU.Sc2ySwM_362.2782 Anthoceros agrestis HOM05D001082 ORTHO05D005120 6.8e-15 85.9 215 29.3
MD05G1161100 Malus domestica HOM05D001082 ORTHO05D005120 1.2e-14 85.1 65 61.5
VMungo0720G2272 Vigna mungo HOM05D001082 ORTHO05D005120 1.3e-13 81.6 62 59.7
MD05G1162300 Malus domestica HOM05D004954 ORTHO05D006267 1.7e-13 81.3 61 62.3
ClCG06G008350 Citrullus lanatus HOM05D001082 ORTHO05D005120 1.4e-12 78.2 62 54.8
Mapoly0008s0081 Marchantia polymorpha HOM05D001082 ORTHO05D005120 3.2e-12 77.0 216 28.2
Oeu010602.3 Olea europaea HOM05D001082 ORTHO05D005120 7.0e-12 75.9 47 70.2
Cpa.g.sc21.218 Carica papaya HOM05D001082 ORTHO05D005120 8.6e-10 68.9 49 63.3
CBR_g55210 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-07 62.0 190 28.9


User provided reference genes

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