Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 3.8e-59 231.5 133 100.0
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.3e-46 189.9 104 92.3
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 2.2e-46 189.1 104 92.3
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.4e-45 186.4 104 90.4
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.8e-45 186.0 100 94.0
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 9.1e-45 183.7 104 88.5
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 9.1e-45 183.7 104 88.5
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 2.0e-39 166.0 98 80.6
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 2.2e-38 162.5 98 80.6
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 2.2e-38 162.5 100 82.0
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 2.8e-38 162.2 100 79.0
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 6.3e-38 161.0 104 76.0
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.6e-36 156.4 98 77.6
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 1.6e-36 156.4 98 78.6
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 2.6e-36 155.6 100 76.0
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 3.5e-36 155.2 100 75.0
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 5.9e-36 154.5 98 75.5
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 7.7e-36 154.1 98 75.5
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.0e-35 153.7 100 75.0
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 1.0e-35 153.7 98 75.5
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.3e-35 153.3 98 75.5
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.3e-35 153.3 100 75.0
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 1.7e-35 152.9 100 73.0
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 2.2e-35 152.5 98 76.5
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 2.9e-35 152.1 98 76.5
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 2.9e-35 152.1 114 67.5
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 5.0e-35 151.4 100 74.0
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 8.5e-35 150.6 102 71.6
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 1.5e-34 149.8 100 70.0
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.9e-34 149.4 88 84.1
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.9e-34 149.4 100 73.0
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 1.9e-34 149.4 100 74.0
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 2.5e-34 149.1 100 73.0
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 2.5e-34 149.1 100 74.0
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 3.2e-34 148.7 100 71.0
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 3.2e-34 148.7 98 74.5
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 3.2e-34 148.7 98 72.4
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 7.2e-34 147.5 104 68.3
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 7.2e-34 147.5 104 70.2
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 7.2e-34 147.5 104 70.2
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 7.2e-34 147.5 100 72.0
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 7.2e-34 147.5 100 73.0
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.2e-33 146.7 98 70.4
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 1.6e-33 146.4 100 72.0
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 2.1e-33 146.0 98 71.4
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 2.1e-33 146.0 104 69.2
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 2.1e-33 146.0 100 70.0
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 2.1e-33 146.0 98 71.4
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 2.7e-33 145.6 100 70.0
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 3.6e-33 145.2 98 71.4
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 3.6e-33 145.2 99 69.7
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 3.6e-33 145.2 98 72.4
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 4.7e-33 144.8 100 68.0
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.1e-33 144.4 98 70.4
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.1e-33 144.4 98 70.4
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 8.0e-33 144.1 100 71.0
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.4e-32 143.3 98 69.4
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 1.4e-32 143.3 98 70.4
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.4e-32 143.3 100 73.0
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 1.4e-32 143.3 104 68.3
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 1.8e-32 142.9 100 68.0
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 1.8e-32 142.9 98 68.4
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 2.3e-32 142.5 96 69.8
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 2.3e-32 142.5 100 73.0
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 3.0e-32 142.1 99 65.7
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 6.8e-32 141.0 99 64.6
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 6.8e-32 141.0 99 64.6
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 6.8e-32 141.0 99 64.6
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 6.8e-32 141.0 99 64.6
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 6.8e-32 141.0 99 64.6
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.8e-32 141.0 98 68.4
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 6.8e-32 141.0 100 67.0
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 8.8e-32 140.6 104 67.3
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 8.8e-32 140.6 99 64.6
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 1.2e-31 140.2 98 67.3
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 1.2e-31 140.2 103 66.0
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 1.2e-31 140.2 104 65.4
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 2.0e-31 139.4 99 63.6
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 2.6e-31 139.0 98 69.4
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 2.6e-31 139.0 98 65.3
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 3.4e-31 138.7 102 67.6
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 5.7e-31 137.9 99 63.6
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 7.5e-31 137.5 102 66.7
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 9.7e-31 137.1 99 62.6
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 2.2e-30 136.0 100 65.0
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 2.2e-30 136.0 99 62.6
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 2.8e-30 135.6 98 62.2
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 4.8e-30 134.8 98 66.3
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 4.1e-29 131.7 100 63.0
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 5.9e-28 127.9 147 49.0
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 1.9e-26 122.9 98 63.3
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 1.4e-24 116.7 94 61.7
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 1.8e-24 116.3 74 77.0
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 5.2e-24 114.8 97 55.7
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.2e-23 113.6 143 45.5
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 1.1e-21 107.1 95 51.6
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 1.2e-20 103.6 70 74.3
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.6e-20 103.2 79 63.3
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 5.9e-20 101.3 76 68.4
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.0e-19 100.5 98 53.1
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 2.3e-19 99.4 70 71.4
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 3.8e-19 98.6 70 70.0
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 1.5e-18 96.7 70 68.6
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 1.5e-18 96.7 70 70.0
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 1.9e-18 96.3 70 67.1
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 9.5e-18 94.0 71 62.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.2e-17 93.6 70 67.1
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 1.0e-16 90.5 99 45.5
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 1.4e-16 90.1 70 65.7
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.8e-16 89.7 70 65.7
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 2.3e-16 89.4 69 62.3
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 4.0e-16 88.6 85 45.9
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.4e-15 85.5 70 61.4
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.3e-14 83.6 70 60.0
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 1.3e-14 83.6 74 55.4
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 4.1e-13 78.6 80 57.5
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.0e-12 76.3 66 57.6
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.3e-11 73.6 70 50.0
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 2.5e-10 69.3 72 52.8
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 2.3e-08 62.8 98 30.6


User provided reference genes

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