Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G134.96 Capsicum annuum HOM05D004252 ORTHO05D005101 5.8e-275 950.3 478 100.0
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 1.7e-266 922.2 479 97.3
Sopen01g040990 Solanum pennellii HOM05D004252 ORTHO05D005101 1.7e-266 922.2 479 97.3
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 5.1e-263 910.6 476 96.4
Nitab4.5_0001592g0060 Nicotiana tabacum HOM05D004252 ORTHO05D005101 6.2e-261 903.7 482 95.4
Oeu027473.1 Olea europaea HOM05D004252 ORTHO05D005101 9.6e-222 773.5 473 83.5
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 4.8e-221 771.2 481 80.9
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 1.1e-220 770.0 481 82.1
Oeu002657.3 Olea europaea HOM05D004252 ORTHO05D005101 1.1e-217 760.0 477 81.6
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 1.6e-216 756.1 476 81.7
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 1.9e-214 749.2 481 79.4
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 1.9e-214 749.2 481 79.4
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 2.5e-214 748.8 478 79.9
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 1.3e-213 746.5 475 79.6
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 1.3e-213 746.5 484 79.3
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 2.2e-213 745.7 478 78.9
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 6.9e-212 740.7 478 78.9
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 5.9e-211 737.6 449 82.6
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 5.9e-211 737.6 479 77.7
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 5.9e-211 737.6 487 78.4
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 1.0e-210 736.9 479 79.1
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 2.2e-210 735.7 474 80.2
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 2.5e-209 732.3 481 78.8
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 3.2e-209 731.9 484 78.9
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 5.5e-209 731.1 476 78.4
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 1.2e-208 729.9 481 78.4
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 2.7e-208 728.8 485 77.5
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 3.0e-207 725.3 480 78.3
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 8.8e-207 723.8 477 78.6
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 8.8e-207 723.8 483 77.2
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 2.5e-206 722.2 476 78.2
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 3.3e-206 721.8 480 77.3
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 7.4e-206 720.7 481 78.2
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 1.3e-205 719.9 475 78.1
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 1.7e-205 719.5 466 79.6
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 1.7e-205 719.5 475 77.9
Ah.06g192370 Amaranthus hybridus HOM05D004252 ORTHO05D005101 2.2e-205 719.2 481 76.3
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 2.2e-205 719.2 483 77.0
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 4.8e-205 718.0 481 77.5
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 6.3e-205 717.6 491 77.8
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 1.8e-204 716.1 480 76.9
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 2.4e-204 715.7 480 77.1
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 2.4e-204 715.7 473 78.2
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 2.4e-204 715.7 480 77.5
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 4.1e-204 714.9 477 77.1
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 5.3e-204 714.5 480 76.2
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 6.9e-204 714.1 480 76.9
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 6.9e-204 714.1 512 73.6
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 9.1e-204 713.8 481 77.8
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 7.7e-203 710.7 481 77.1
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 7.7e-203 710.7 480 77.7
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 1.0e-202 710.3 477 76.7
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 1.0e-202 710.3 480 77.1
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 1.0e-202 710.3 480 77.1
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 1.3e-202 709.9 470 78.7
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 2.2e-202 709.1 471 78.1
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 2.2e-202 709.1 481 77.1
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 2.2e-202 709.1 516 72.9
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 3.8e-202 708.4 478 75.7
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 3.8e-202 708.4 478 75.7
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 3.8e-202 708.4 480 76.0
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 6.5e-202 707.6 481 77.5
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 1.1e-201 706.8 477 76.5
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 1.1e-201 706.8 466 78.5
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 1.4e-201 706.4 477 76.1
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 1.9e-201 706.1 480 75.4
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 5.5e-201 704.5 480 76.7
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 1.6e-200 703.0 488 75.2
SGA_v2.0_scaffold172G38984 Striga asiatica HOM05D004252 ORTHO05D005101 3.0e-199 698.7 471 79.2
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 1.5e-198 696.4 448 79.7
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 3.3e-198 695.3 472 77.1
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 5.7e-198 694.5 466 77.0
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 5.7e-198 694.5 466 77.0
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 9.7e-198 693.7 473 75.5
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 6.3e-197 691.0 481 74.8
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 1.1e-196 690.3 480 75.6
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 1.8e-196 689.5 484 75.6
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 3.1e-196 688.7 474 75.3
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 5.3e-196 688.0 472 76.9
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 1.2e-195 686.8 462 76.8
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.0e-195 686.0 484 74.4
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 5.9e-195 684.5 485 75.3
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 1.5e-193 679.9 470 75.3
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 9.4e-193 677.2 478 73.6
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 2.0e-190 669.5 470 74.3
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 2.0e-190 669.5 471 75.6
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 2.0e-190 669.5 473 74.8
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 5.7e-190 667.9 474 74.9
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 9.7e-190 667.2 481 74.4
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 2.2e-189 666.0 477 75.3
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 2.8e-189 665.6 472 74.6
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 8.2e-189 664.1 475 73.9
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 4.1e-188 661.8 470 73.6
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 4.1e-188 661.8 470 73.6
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 9.1e-188 660.6 472 74.2
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 2.9e-186 655.6 467 73.9
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 2.9e-186 655.6 467 73.9
CARHR078990 Cardamine hirsuta HOM05D004252 ORTHO05D005101 8.5e-186 654.1 469 74.2
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 3.0e-175 619.0 476 68.9
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 5.2e-175 618.2 475 68.2
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 1.8e-172 609.8 465 68.0
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 1.6e-171 606.7 508 66.3
SEGI_19302 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 9.5e-169 597.4 498 64.9
CDE02G1705 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 3.6e-168 595.5 465 66.7
Atru.chr2.822 Acer truncatum HOM05D004252 ORTHO05D005101 2.9e-165 585.9 368 80.4
Dinv08152 Davidia involucrata HOM05D004252 ORTHO05D005101 6.4e-157 558.1 337 83.1
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 4.9e-141 505.4 443 63.7
SHI18418 Sapria himalayana HOM05D004252 ORTHO05D005101 2.3e-138 496.5 469 56.5
Os08g0333000 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 5.6e-137 491.9 381 68.5
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 2.8e-136 489.6 445 60.7
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 2.0e-126 456.8 346 71.1
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 3.3e-121 439.5 498 51.8
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 1.0e-114 417.9 483 49.3
Cpa.g.sc2756.1 Carica papaya HOM05D004252 ORTHO05D005101 1.0e-109 401.4 267 80.1
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 3.2e-108 396.4 470 48.3
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 1.3e-101 374.4 492 44.9
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 6.5e-101 372.1 493 44.4
Aqoxy1G03371 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.4e-79 300.4 220 72.7
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 6.5e-61 239.2 197 68.0
HanXRQChr13g0410791 Helianthus annuus HOM05D004252 ORTHO05D005101 1.8e-42 177.9 155 63.2
HanXRQChr01g0016721 Helianthus annuus HOM05D004252 ORTHO05D005101 2.3e-42 177.6 155 63.2
HanXRQChr10g0278361 Helianthus annuus HOM05D004252 ORTHO05D005101 2.0e-38 164.5 158 60.8
Atru.chr2.823 Acer truncatum HOM05D004252 ORTHO05D005101 3.4e-25 120.6 60 90.0
Cpa.g.sc2756.2 Carica papaya HOM05D004252 ORTHO05D005101 2.4e-23 114.4 72 75.0
DCAR_027576 Daucus carota HOM05D004252 ORTHO05D005101 2.4e-10 71.2 94 48.9
Pp3c15_3250 Physcomitrium patens HOM05D004252 ORTHO05D005101 2.4e-10 71.2 185 32.4
PGR031G0210 Punica granatum HOM05D004252 ORTHO05D005101 2.9e-08 64.3 37 83.8


User provided reference genes

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