Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 1.2e-181 639.8 341 100.0
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 4.2e-163 578.2 336 91.4
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 1.6e-162 576.2 336 92.3
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 1.0e-161 573.5 341 90.0
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 1.0e-161 573.5 338 91.4
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 6.6e-148 527.7 367 80.1
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 5.0e-140 501.5 275 95.3
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.6e-130 469.9 337 75.1
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 5.8e-128 461.5 336 74.4
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 5.8e-128 461.5 336 74.4
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 9.9e-128 460.7 337 73.3
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 1.3e-127 460.3 335 73.4
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 1.3e-127 460.3 337 73.3
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 2.2e-127 459.5 336 73.8
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 4.9e-127 458.4 339 74.6
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 6.4e-127 458.0 337 73.6
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.9e-126 456.4 337 72.7
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 2.4e-126 456.1 337 72.4
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 7.1e-126 454.5 337 73.3
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 7.1e-126 454.5 336 72.9
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 9.2e-126 454.1 329 73.3
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 1.2e-125 453.8 302 78.5
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 4.6e-125 451.8 338 71.0
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 4.6e-125 451.8 336 72.3
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 7.8e-125 451.1 338 71.9
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 7.8e-125 451.1 336 72.3
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 1.3e-124 450.3 334 72.5
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.3e-124 450.3 336 72.3
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 3.0e-124 449.1 337 72.1
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 6.6e-124 448.0 336 71.1
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 6.6e-124 448.0 337 71.5
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 8.6e-124 447.6 336 71.4
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 7.3e-123 444.5 331 71.3
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 1.2e-122 443.7 339 70.5
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 1.2e-122 443.7 337 70.9
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 2.1e-122 443.0 337 71.8
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 2.8e-122 442.6 336 70.8
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 3.6e-122 442.2 337 70.3
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 3.1e-121 439.1 337 71.2
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 3.1e-121 439.1 336 70.2
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 8.9e-121 437.6 334 69.5
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 8.9e-121 437.6 338 72.5
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.5e-120 436.8 335 70.7
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 1.5e-120 436.8 334 70.4
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 2.0e-120 436.4 331 70.4
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 4.4e-120 435.3 329 69.9
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 7.6e-120 434.5 334 68.6
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 9.9e-120 434.1 336 70.2
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 1.7e-119 433.3 334 68.6
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 1.7e-119 433.3 334 68.9
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 2.2e-119 433.0 334 68.6
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 2.9e-119 432.6 332 68.7
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 1.4e-118 430.3 337 66.8
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 1.9e-118 429.9 341 68.0
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 3.2e-118 429.1 336 68.2
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 3.2e-118 429.1 343 70.0
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 7.1e-118 427.9 300 75.3
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 7.1e-118 427.9 336 69.6
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 7.1e-118 427.9 334 67.7
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 7.1e-118 427.9 316 72.8
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 1.2e-117 427.2 304 71.7
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.1e-117 426.4 319 73.4
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 2.7e-117 426.0 337 69.7
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 2.7e-117 426.0 336 67.9
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 3.5e-117 425.6 336 68.5
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 3.5e-117 425.6 336 68.5
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 1.7e-116 423.3 302 73.5
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 2.3e-116 422.9 335 68.7
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 5.1e-116 421.8 342 67.0
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 2.5e-115 419.5 336 69.3
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 5.6e-115 418.3 357 65.3
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 7.3e-115 417.9 344 66.6
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 9.6e-115 417.5 336 67.6
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.3e-114 417.2 336 67.6
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 3.1e-113 412.5 332 67.5
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 4.0e-113 412.1 358 65.9
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 5.3e-113 411.8 343 68.2
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 9.0e-113 411.0 343 68.5
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 1.2e-112 410.6 274 77.7
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.5e-112 410.2 365 63.6
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.5e-112 410.2 336 67.0
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 2.6e-112 409.5 338 66.0
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 1.7e-111 406.8 316 70.9
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 2.1e-109 399.8 314 67.8
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 2.1e-109 399.8 376 60.4
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 3.5e-109 399.1 331 65.6
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.5e-109 399.1 329 66.3
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 4.6e-109 398.7 312 67.6
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 6.0e-109 398.3 339 64.6
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 7.9e-109 397.9 365 63.3
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.3e-108 397.1 343 65.9
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 5.1e-108 395.2 310 66.5
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 4.3e-107 392.1 403 58.6
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 4.5e-104 382.1 334 62.0
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 3.8e-103 379.0 311 68.2
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 1.1e-102 377.5 297 68.0
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 7.1e-102 374.8 266 74.4
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 9.3e-102 374.4 300 66.3
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.5e-99 367.1 337 63.2
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 1.9e-99 366.7 300 66.7
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 3.7e-98 362.5 243 79.4
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 2.0e-96 356.7 300 62.3
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 9.3e-94 347.8 305 63.9
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 1.2e-93 347.4 345 55.9
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 2.7e-93 346.3 274 67.9
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 5.9e-88 328.6 248 67.3
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.4e-86 323.9 236 76.7
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 3.2e-86 322.8 333 52.3
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 5.5e-86 322.0 213 77.5
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.3e-84 317.4 210 79.0
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 5.3e-81 305.4 196 79.1
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 1.7e-79 300.4 276 58.3
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 5.1e-76 288.9 233 69.1
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 2.2e-71 273.5 206 70.9
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 3.9e-68 262.7 169 81.1
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 6.5e-63 245.4 323 43.7
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 4.2e-62 242.7 203 65.0
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 5.3e-57 225.7 169 71.0
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 2.4e-41 173.7 283 40.6
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 1.6e-37 161.0 151 60.3
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 4.0e-36 156.4 145 60.0
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 1.5e-30 137.9 103 69.9
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 4.6e-24 116.3 101 62.4
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 1.3e-23 114.8 93 64.5
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 8.6e-23 112.1 113 55.8
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 3.6e-21 106.7 99 58.6
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 4.7e-21 106.3 246 36.2
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 1.1e-20 105.1 79 68.4
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 5.2e-20 102.8 118 55.1
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 3.7e-18 96.7 64 76.6
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.4e-17 94.0 62 80.6
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 4.1e-17 93.2 62 77.4
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 9.2e-17 92.0 61 75.4
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.6e-16 91.3 62 77.4
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 1.2e-13 81.6 109 45.0
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 3.6e-13 80.1 56 76.8
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 4.7e-13 79.7 55 78.2
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 1.8e-12 77.8 99 42.4
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 2.3e-12 77.4 81 46.9
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.7e-10 71.2 37 81.1
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 3.2e-09 67.0 48 68.8
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 2.7e-08 63.9 53 62.3
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 6.0e-08 62.8 35 85.7
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 6.0e-08 62.8 35 85.7
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 1.3e-07 61.6 131 35.9
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 1.9e-06 57.8 40 72.5


User provided reference genes

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