Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1300.6 Capsicum annuum HOM05D000004 ORTHO05D000002 2.6e-77 292.0 144 100.0
Hund24199 Selenicereus undatus HOM05D000004 ORTHO05D007707 3.9e-17 92.0 125 41.6
CAN.G853.33 Capsicum annuum HOM05D000004 ORTHO05D000002 1.3e-15 87.0 122 41.0
Atru.chr3.1983 Acer truncatum HOM05D000004 ORTHO05D000002 2.1e-15 86.3 107 44.9
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 5.3e-14 81.6 61 50.8
Sp1g30070 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.0e-13 79.7 72 44.4
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.4e-13 79.0 135 32.6
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 1.3e-12 77.0 65 44.6
Nn2g14750 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.3e-12 77.0 61 49.2
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 2.2e-12 76.3 69 49.3
BolC1t04627H Brassica oleracea HOM05D011596 ORTHO05D000002 3.8e-12 75.5 62 46.8
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.4e-12 74.7 58 50.0
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 6.4e-12 74.7 87 42.5
BcaB05g22502 Brassica carinata HOM05D011596 ORTHO05D000002 8.4e-12 74.3 148 30.4
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.4e-12 74.3 65 46.2
ECA233G4737 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-11 73.6 65 43.1
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-11 73.2 58 48.3
TPR.G22228 Trifolium pratense HOM05D000004 ORTHO05D000002 1.9e-11 73.2 129 34.1
BcaC05g28910 Brassica carinata HOM05D019583 ORTHO05D000002 3.2e-11 72.4 141 30.5
CSS0032753 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 4.2e-11 72.0 149 29.5
COL.COLO4_19400 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.2e-11 72.0 119 32.8
ECA236G2858 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-11 72.0 58 46.6
ECA246G2187 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-11 72.0 58 46.6
Psat1g210200 Pisum sativum HOM05D000004 ORTHO05D000002 5.4e-11 71.6 75 45.3
TPR.G18991 Trifolium pratense HOM05D000004 ORTHO05D000002 5.4e-11 71.6 86 39.5
BolC9t56893H Brassica oleracea HOM05D011596 ORTHO05D000002 7.1e-11 71.2 71 35.2
ECA232G4351 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-11 71.2 65 44.6
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 9.3e-11 70.9 135 31.1
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-11 70.9 62 48.4
ECA232G3081 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.2e-10 70.5 70 44.3
COL.COLO4_25153 Corchorus olitorius HOM05D030667 ORTHO05D000002 1.6e-10 70.1 58 43.1
ECA232G1662 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-10 70.1 58 46.6
ECA233G3083 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-10 70.1 65 41.5
ECA236G2364 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-10 70.1 57 47.4
ECA246G1959 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-10 70.1 58 48.3
ECA248G0900 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-10 69.3 58 46.6
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 3.5e-10 68.9 63 44.4
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 3.5e-10 68.9 63 44.4
ECA232G1063 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.6e-10 68.6 66 45.5
ECA234G0220 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-10 68.6 58 44.8
ECA236G1497 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-10 68.6 58 43.1
CAN.G1642.2 Capsicum annuum HOM05D011596 ORTHO05D000002 6.0e-10 68.2 57 49.1
COL.COLO4_33961 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.0e-10 68.2 92 34.8
ECA233G6229 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.0e-10 68.2 58 46.6
ECA234G4361 Erigeron canadensis HOM05D000222 ORTHO05D000329 6.0e-10 68.2 58 43.1
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.0e-10 68.2 57 43.9
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 7.9e-10 67.8 60 45.0
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 7.9e-10 67.8 60 45.0
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 7.9e-10 67.8 52 50.0
ECA233G2726 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-09 67.4 58 43.1
PGSC0003DMG400042551 Solanum tuberosum HOM05D023338 ORTHO05D028486 1.0e-09 67.4 83 38.6
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.3e-09 67.0 88 35.2
ECA246G1596 Erigeron canadensis HOM05D000004 ORTHO05D000048 1.8e-09 66.6 58 46.6
Aa31LG4G9850 Aethionema arabicum HOM05D000004 ORTHO05D000002 2.3e-09 66.2 59 39.0
CAN.G2537.1 Capsicum annuum HOM05D000004 ORTHO05D000002 2.3e-09 66.2 111 36.0
Ca_22397_v3 Cicer arietinum L. HOM05D019583 ORTHO05D025031 2.3e-09 66.2 65 36.9
ECA233G3795 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-09 66.2 146 27.4
Sopen04g023950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-09 66.2 64 42.2
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-09 65.9 61 41.0
COL.COLO4_33175 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.0e-09 65.9 63 42.9
ECA247G2578 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.0e-09 65.9 58 43.1
BcaB07g32201 Brassica carinata HOM05D011596 ORTHO05D000002 3.9e-09 65.5 74 39.2
CAN.G386.37 Capsicum annuum HOM05D000004 ORTHO05D000002 3.9e-09 65.5 75 40.0
SpUn0980_0010 Schrenkiella parvula HOM05D011596 ORTHO05D000002 3.9e-09 65.5 63 41.3
ECA233G5891 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.1e-09 65.1 52 46.2
ECA248G2380 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.1e-09 65.1 142 29.6
Phvul.004G050550 Phaseolus vulgaris HOM05D000004 ORTHO05D000002 5.1e-09 65.1 68 44.1
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 5.1e-09 65.1 64 40.6
Duzib160G0817 Durio zibethinus HOM05D000004 ORTHO05D000002 6.7e-09 64.7 62 48.4
ECA247G0045 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.7e-09 64.7 143 27.3
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.7e-09 64.7 57 42.1
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 6.7e-09 64.7 60 43.3
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 8.7e-09 64.3 54 44.4
ECA234G1032 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.7e-09 64.3 58 43.1
ECA247G0635 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.7e-09 64.3 132 29.5
ECA248G1502 Erigeron canadensis HOM05D000005 ORTHO05D000012 8.7e-09 64.3 59 44.1
COL.COLO4_33444 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.1e-08 63.9 89 37.1
Sopen02g028910 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-08 63.9 62 43.5
CSS0031064 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-08 63.5 147 27.2
ECA233G1543 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-08 63.5 133 30.8
ECA234G1098 Erigeron canadensis HOM05D000004 ORTHO05D000001 1.5e-08 63.5 132 28.8
Manes.08G071733 Manihot esculenta HOM05D000004 ORTHO05D000002 1.5e-08 63.5 127 30.7
ECA248G2403 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-08 63.2 54 42.6
Gohir.A08G195550 Gossypium hirsutum HOM05D001322 ORTHO05D001301 1.9e-08 63.2 83 37.3
AUR62034871 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.5e-08 62.8 80 35.0
COL.COLO4_12314 Corchorus olitorius HOM05D001619 ORTHO05D001541 2.5e-08 62.8 60 43.3
ECA240G3467 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-08 62.8 53 43.4
Atru.chr11.883 Acer truncatum HOM05D000004 ORTHO05D000002 3.3e-08 62.4 82 35.4
COL.COLO4_37053 Corchorus olitorius HOM05D000004 ORTHO05D000002 4.3e-08 62.0 87 34.5
ECA234G0112 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-08 62.0 147 29.3
HanXRQChr08g0211671 Helianthus annuus HOM05D046019 ORTHO05D000002 4.3e-08 62.0 59 44.1
COL.COLO4_08297 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.6e-08 61.6 53 45.3
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.6e-08 61.6 128 30.5
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 5.6e-08 61.6 140 32.1
Sp7g03930 Schrenkiella parvula HOM05D011596 ORTHO05D000002 5.6e-08 61.6 66 39.4
COL.COLO4_07267 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.4e-08 61.2 91 33.0
COL.COLO4_14043 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.4e-08 61.2 118 28.8
COL.COLO4_24687 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.4e-08 61.2 53 45.3
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 7.4e-08 61.2 83 41.0
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 7.4e-08 61.2 132 26.5
ECA247G0871 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.4e-08 61.2 58 39.7
BcaB07g33616 Brassica carinata HOM05D000004 ORTHO05D000002 9.6e-08 60.8 138 29.0
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 9.6e-08 60.8 120 27.5
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 9.6e-08 60.8 74 43.2
ECA233G2312 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-08 60.8 58 37.9
ECA234G4714 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-08 60.8 58 39.7
ECA236G5029 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-08 60.8 132 29.5
Lalb_Chr23g0273591 Lupinus albus HOM05D000004 ORTHO05D000002 1.3e-07 60.5 56 39.3
Atru.chr4.870 Acer truncatum HOM05D000004 ORTHO05D000002 1.6e-07 60.1 127 29.1
ECA236G3223 Erigeron canadensis HOM05D003069 ORTHO05D002578 1.6e-07 60.1 47 51.1
Psat5g069760 Pisum sativum HOM05D000004 ORTHO05D000002 1.6e-07 60.1 138 27.5
BcaC08g44498 Brassica carinata HOM05D000004 ORTHO05D027131 2.8e-07 59.3 83 34.9
COL.COLO4_30206 Corchorus olitorius HOM05D030667 ORTHO05D000002 2.8e-07 59.3 60 41.7
SHI44582 Sapria himalayana HOM05D000004 ORTHO05D000002 2.8e-07 59.3 69 36.2
CAN.G1954.3 Capsicum annuum HOM05D000004 ORTHO05D000002 3.7e-07 58.9 100 37.0
COL.COLO4_15060 Corchorus olitorius HOM05D000004 ORTHO05D000002 3.7e-07 58.9 58 41.4
ECA247G1596 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.7e-07 58.9 132 27.3
Sopen01g010380 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-07 58.9 55 41.8
AUR62027767 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.8e-07 58.5 50 42.0
Hma1.2p1_0540F.1_g174670 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.8e-07 58.5 61 41.0
Psat5g116760 Pisum sativum HOM05D000004 ORTHO05D000002 4.8e-07 58.5 75 37.3
BcaC07g39590 Brassica carinata HOM05D000004 ORTHO05D000002 6.2e-07 58.2 89 40.4
COL.COLO4_16155 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.2e-07 58.2 53 47.2
COL.COLO4_36867 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.2e-07 58.2 81 32.1
ECA238G2984 Erigeron canadensis HOM05D000005 ORTHO05D000012 6.2e-07 58.2 61 42.6
BolC7t43393H Brassica oleracea HOM05D011596 ORTHO05D000002 8.1e-07 57.8 53 39.6
Psat2g029440 Pisum sativum HOM05D000004 ORTHO05D000002 8.1e-07 57.8 67 41.8
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 8.1e-07 57.8 132 29.5
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-06 57.4 86 33.7
PSO063G2480 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.4 84 34.5
PSO170G5011 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.4 124 25.8
TAR643G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.1e-06 57.4 60 40.0
COL.COLO4_36099 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.4e-06 57.0 137 26.3
Psat6g093200 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-06 57.0 57 43.9
TPR.G11444 Trifolium pratense HOM05D000004 ORTHO05D000002 1.4e-06 57.0 51 45.1
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 1.8e-06 56.6 116 32.8
BcaB03g14473 Brassica carinata HOM05D000004 ORTHO05D000002 2.4e-06 56.2 53 45.3
COL.COLO4_00110 Corchorus olitorius HOM05D000004 ORTHO05D000002 2.4e-06 56.2 65 32.3
Hma1.2p1_1820F.1_g304130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 3.1e-06 55.8 58 44.8
Nn5g27771 Nelumbo nucifera HOM05D000004 ORTHO05D000002 3.1e-06 55.8 121 28.1
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.0e-06 55.5 50 42.0
PSO063G4254 Papaver somniferum HOM05D000004 ORTHO05D000002 4.0e-06 55.5 127 24.4
Psat2g014880 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 55.5 138 29.0
Atru.chr10.562 Acer truncatum HOM05D000004 ORTHO05D000002 5.3e-06 55.1 65 36.9
COL.COLO4_05954 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.3e-06 55.1 60 38.3
COL.COLO4_19459 Corchorus olitorius HOM05D000004 ORTHO05D000002 5.3e-06 55.1 87 34.5
ECA238G1046 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.3e-06 55.1 55 36.4
PSO170G4312 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-06 55.1 89 29.2
PSO478G1373 Papaver somniferum HOM05D000004 ORTHO05D000002 5.3e-06 55.1 64 37.5
BcaC04g19062 Brassica carinata HOM05D061053 ORTHO05D000002 6.9e-06 54.7 116 32.8
CAN.G929.35 Capsicum annuum HOM05D014102 ORTHO05D016168 6.9e-06 54.7 125 30.4
Nitab4.5_0000009g0180 Nicotiana tabacum HOM05D013382 ORTHO05D027131 6.9e-06 54.7 51 39.2
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 6.9e-06 54.7 122 32.0
PSO017G1164 Papaver somniferum HOM05D000004 ORTHO05D000002 9.0e-06 54.3 99 28.3
QL03p019459 Quercus lobata HOM05D000004 ORTHO05D000002 9.0e-06 54.3 55 40.0
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 9.0e-06 54.3 59 39.0
SHI25069 Sapria himalayana HOM05D000004 ORTHO05D000002 9.0e-06 54.3 132 25.8


User provided reference genes

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