Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1297.2 Capsicum annuum HOM05D001476 ORTHO05D006149 0.0e+00 1195.3 593 100.0
Sopen10g034520 Solanum pennellii HOM05D001476 ORTHO05D006149 0.0e+00 1108.6 593 92.2
Solyc10g085060.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 0.0e+00 1090.9 593 91.2
Peaxi162Scf00009g02022 Petunia axillaris HOM05D001476 ORTHO05D006149 0.0e+00 1081.6 598 90.8
PGSC0003DMG400011017 Solanum tuberosum HOM05D001476 ORTHO05D006149 0.0e+00 1078.5 593 91.4
Nitab4.5_0004912g0100 Nicotiana tabacum HOM05D001476 ORTHO05D006149 4.1e-312 1073.9 590 90.5
Nitab4.5_0000652g0160 Nicotiana tabacum HOM05D001476 ORTHO05D006149 2.9e-308 1061.2 594 89.4
Nitab4.5_0000008g0700 Nicotiana tabacum HOM05D001476 ORTHO05D006149 5.8e-301 1036.9 593 86.2
Nitab4.5_0011723g0020 Nicotiana tabacum HOM05D001476 ORTHO05D006149 1.3e-300 1035.8 593 85.7
Peaxi162Scf00141g00813 Petunia axillaris HOM05D001476 ORTHO05D006149 4.9e-292 1007.3 593 83.8
Solyc09g013130.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 3.0e-289 998.0 593 83.0
CAN.G355.19 Capsicum annuum HOM05D001476 ORTHO05D006149 1.1e-288 996.1 584 84.1
Sopen09g006990 Solanum pennellii HOM05D001476 ORTHO05D006149 3.4e-285 984.6 593 82.1
PGSC0003DMG400020350 Solanum tuberosum HOM05D001476 ORTHO05D006149 1.3e-284 982.6 593 82.0
Dinv35515 Davidia involucrata HOM05D001476 ORTHO05D006149 1.3e-281 972.6 594 82.0
CSS0024803 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D006149 1.5e-277 959.1 596 79.2
PGR031G2805 Punica granatum HOM05D001476 ORTHO05D006149 1.5e-277 959.1 597 78.9
Actinidia13780 Actinidia chinensis HOM05D001476 ORTHO05D006149 1.7e-276 955.7 593 80.1
GSVIVG01034014001 Vitis vinifera HOM05D001476 ORTHO05D006149 1.4e-275 952.6 597 79.2
SGA_v2.0_scaffold85G26765 Striga asiatica HOM05D001476 ORTHO05D006149 3.2e-275 951.4 592 78.5
Migut.J00228 Erythranthe guttata HOM05D001476 ORTHO05D006149 1.2e-274 949.5 613 77.7
Nn2g13602 Nelumbo nucifera HOM05D001476 ORTHO05D006149 1.3e-273 946.0 596 78.4
SGA_v2.0_scaffold22G09908 Striga asiatica HOM05D001476 ORTHO05D006149 3.9e-273 944.5 589 78.8
ClCG04G007260 Citrullus lanatus HOM05D001476 ORTHO05D006149 8.7e-273 943.3 580 79.3
Cc06_g01690 Coffea canephora HOM05D001476 ORTHO05D006149 1.5e-272 942.6 598 78.6
Hma1.2p1_0763F.1_g214610 Hydrangea macrophylla HOM05D001476 ORTHO05D006149 1.9e-272 942.2 596 79.9
TAR402G0001 Trochodendron aralioides HOM05D001476 ORTHO05D006149 4.3e-272 941.0 596 78.4
Eucgr.B02781 Eucalyptus grandis HOM05D001476 ORTHO05D006149 5.7e-272 940.6 579 80.5
SalBow5G4659 Salvia bowleyana HOM05D001476 ORTHO05D006149 2.1e-271 938.7 622 75.6
Cpa.g.sc56.111 Carica papaya HOM05D001476 ORTHO05D006149 2.8e-271 938.3 594 78.5
Potri.006G096100 Populus trichocarpa HOM05D001476 ORTHO05D006149 2.8e-271 938.3 572 80.4
Duzib106G0695 Durio zibethinus HOM05D001476 ORTHO05D006149 4.8e-271 937.6 593 78.8
Oeu004614.2 Olea europaea HOM05D001476 ORTHO05D006149 6.3e-271 937.2 567 81.8
Thecc.05G022500 Theobroma cacao HOM05D001476 ORTHO05D006149 1.4e-270 936.0 593 78.2
Sed0003764 Sechium edule HOM05D001476 ORTHO05D006149 1.8e-270 935.6 579 79.1
Gohir.D09G158600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 2.4e-270 935.3 593 78.1
MELO3C003223.2 Cucumis melo HOM05D001476 ORTHO05D006149 3.1e-270 934.9 580 78.6
Potri.016G110800 Populus trichocarpa HOM05D001476 ORTHO05D006149 1.5e-269 932.6 572 80.2
CsaV3_4G025980 Cucumis sativus L. HOM05D001476 ORTHO05D006149 2.0e-269 932.2 580 78.6
Gohir.A09G163100 Gossypium hirsutum HOM05D001476 ORTHO05D006149 4.5e-269 931.0 593 78.1
Gorai.006G180300 Gossypium raimondii HOM05D001476 ORTHO05D006149 1.0e-268 929.9 607 76.6
TWI74G1595 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 1.0e-268 929.9 601 75.9
Ciclev10011050m.g Citrus clementina HOM05D001476 ORTHO05D006149 2.2e-268 928.7 575 79.7
Manes.09G101900 Manihot esculenta HOM05D001476 ORTHO05D006149 6.5e-268 927.2 592 77.9
Prupe.6G270500 Prunus persica HOM05D001476 ORTHO05D006149 6.5e-268 927.2 595 77.3
Glyma.01G111300 Glycine max HOM05D001476 ORTHO05D006149 8.5e-268 926.8 591 77.3
Atru.chr8.2151 Acer truncatum HOM05D001476 ORTHO05D006149 2.5e-267 925.2 580 78.4
FvH4_6g12060 Fragaria vesca HOM05D001476 ORTHO05D006149 4.2e-267 924.5 595 76.6
THA.LOC104816221 Tarenaya hassleriana HOM05D001476 ORTHO05D006149 2.1e-266 922.2 594 76.3
VMungo0331G0441 Vigna mungo HOM05D001476 ORTHO05D006149 4.6e-266 921.0 590 76.1
TWI77G0827 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 1.0e-265 919.8 601 76.0
ECA236G3430 Erigeron canadensis HOM05D001476 ORTHO05D006149 1.8e-265 919.1 591 76.1
Glyma.03G076900 Glycine max HOM05D001476 ORTHO05D006149 1.8e-265 919.1 590 77.1
Duzib128G0639 Durio zibethinus HOM05D001476 ORTHO05D006149 8.7e-265 916.8 593 77.1
Gorai.012G111700 Gossypium raimondii HOM05D001476 ORTHO05D006149 1.1e-264 916.4 593 76.9
Aqoxy1G00720 Aquilegia oxysepala HOM05D001476 ORTHO05D006149 4.3e-264 914.4 597 75.2
DCAR_024038 Daucus carota HOM05D001476 ORTHO05D006149 4.3e-264 914.4 599 76.6
Lj3g0014893 Lotus japonicus HOM05D001476 ORTHO05D006149 1.3e-263 912.9 589 76.1
Sc24g0002110 Simmondsia chinensis HOM05D001476 ORTHO05D006149 1.6e-263 912.5 590 76.1
Thhalv10020022m.g Eutrema salsugineum HOM05D001476 ORTHO05D006149 3.7e-263 911.4 595 76.1
Phvul.010G008300 Phaseolus vulgaris HOM05D001476 ORTHO05D006149 3.7e-263 911.4 592 75.3
Gohir.A04G088225 Gossypium hirsutum HOM05D001476 ORTHO05D006149 8.2e-263 910.2 593 76.7
Gohir.D04G128600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 3.1e-262 908.3 593 76.4
Sp3g07550 Schrenkiella parvula HOM05D001476 ORTHO05D006149 6.9e-262 907.1 600 75.2
Ca_23816_v3 Cicer arietinum L. HOM05D001476 ORTHO05D006149 2.0e-261 905.6 593 74.5
Medtr4g014960 Medicago truncatula HOM05D001476 ORTHO05D006149 2.0e-261 905.6 576 77.4
CANSAT35G0098 Cannabis sativa HOM05D001476 ORTHO05D006149 3.4e-261 904.8 573 77.0
PSO210G1670 Papaver somniferum HOM05D001476 ORTHO05D006149 3.4e-261 904.8 596 76.2
AT3G09090 Arabidopsis thaliana HOM05D001476 ORTHO05D006149 4.5e-261 904.4 599 75.5
Rhsim05G0205700 Rhododendron simsii HOM05D001476 ORTHO05D006149 7.7e-261 903.7 598 76.1
PSO832G0213 Papaver somniferum HOM05D001476 ORTHO05D006149 1.0e-260 903.3 596 76.0
Sed0007041 Sechium edule HOM05D001476 ORTHO05D006149 1.3e-260 902.9 579 76.0
Carub.0003s0826 Capsella rubella HOM05D001476 ORTHO05D006149 6.5e-260 900.6 598 74.2
Oeu044363.1 Olea europaea HOM05D001476 ORTHO05D006149 8.5e-260 900.2 583 77.9
Haze_20947 Corylus avellana HOM05D001476 ORTHO05D006149 1.9e-259 899.0 631 71.8
Psat0s2261g0240 Pisum sativum HOM05D001476 ORTHO05D006149 1.9e-259 899.0 572 76.6
AL3G20170 Arabidopsis lyrata HOM05D001476 ORTHO05D006149 2.5e-259 898.7 599 74.8
ATR0618G171 Amborella trichopoda HOM05D001476 ORTHO05D006149 3.2e-259 898.3 597 73.5
CiPaw.09G205700 Carya illinoinensis HOM05D001476 ORTHO05D006149 3.2e-259 898.3 597 75.0
HanXRQChr16g0507821 Helianthus annuus HOM05D001476 ORTHO05D006149 4.2e-259 897.9 575 76.7
BcaC09g48009 Brassica carinata HOM05D001476 ORTHO05D006149 5.5e-259 897.5 581 75.9
CARHR083470 Cardamine hirsuta HOM05D001476 ORTHO05D006149 1.6e-258 896.0 579 75.6
BcaC09g48054 Brassica carinata HOM05D001476 ORTHO05D006149 1.4e-257 892.9 599 74.3
Aa31LG3G1620 Aethionema arabicum HOM05D001476 ORTHO05D006149 3.0e-257 891.7 542 80.1
vmacro20235 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 2.0e-256 889.0 576 77.4
BolC1t05473H Brassica oleracea HOM05D001476 ORTHO05D006149 2.6e-256 888.6 616 72.2
FAN05G2912 Fragaria x ananassa HOM05D001476 ORTHO05D006149 3.3e-256 888.3 595 75.0
Lj3A957T35 Lonicera japonica HOM05D001476 ORTHO05D006149 9.7e-256 886.7 689 67.9
MD04G1146700 Malus domestica HOM05D001476 ORTHO05D006149 2.8e-255 885.2 598 74.6
EL10Ac5g11563 Beta vulgaris HOM05D001476 ORTHO05D006149 4.8e-255 884.4 573 75.7
FAN02G1993 Fragaria x ananassa HOM05D001476 ORTHO05D006149 3.1e-254 881.7 595 74.5
C05p58820 Brassica napus HOM05D001476 ORTHO05D006149 6.9e-254 880.6 598 73.6
Lsat_1_v5_gn_0_44361 Lactuca sativa HOM05D001476 ORTHO05D006149 6.9e-254 880.6 591 74.8
Lsat_1_v5_gn_8_99901 Lactuca sativa HOM05D001476 ORTHO05D006149 6.9e-254 880.6 591 74.8
TAR636G2437 Trochodendron aralioides HOM05D001476 ORTHO05D006149 1.2e-253 879.8 505 82.8
Rhsim05G0205800 Rhododendron simsii HOM05D001476 ORTHO05D006149 2.0e-253 879.0 603 74.1
FAN14G1008 Fragaria x ananassa HOM05D001476 ORTHO05D006149 1.0e-252 876.7 610 73.0
A05p39780 Brassica napus HOM05D001476 ORTHO05D006149 1.3e-252 876.3 598 73.4
FAN14G2619 Fragaria x ananassa HOM05D001476 ORTHO05D006149 2.2e-252 875.5 610 72.8
BraA05t22762Z Brassica rapa HOM05D001476 ORTHO05D006149 2.9e-252 875.2 593 73.9
FAN09G2729 Fragaria x ananassa HOM05D001476 ORTHO05D006149 3.8e-252 874.8 610 72.8
BraA01t04314Z Brassica rapa HOM05D001476 ORTHO05D006149 6.5e-252 874.0 600 73.2
HPP92_018041 Vanilla planifolia HOM05D001476 ORTHO05D006149 1.4e-251 872.8 602 71.6
TPR.G5272 Trifolium pratense HOM05D001476 ORTHO05D006149 2.5e-251 872.1 596 73.3
Lalb_Chr07g0193321 Lupinus albus HOM05D001476 ORTHO05D006149 1.2e-250 869.8 594 73.6
BcaC05g29640 Brassica carinata HOM05D001476 ORTHO05D006149 1.8e-249 865.9 595 72.9
MD12G1159900 Malus domestica HOM05D001476 ORTHO05D006149 1.8e-249 865.9 621 71.8
CDE04G3748 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 3.3e-248 861.7 589 71.8
Zm00001eb063130 Zea mays HOM05D001476 ORTHO05D006149 3.1e-246 855.1 596 70.6
unitig_699.g19385 Utricularia gibba HOM05D001476 ORTHO05D006149 2.9e-244 848.6 592 73.0
Cfa017258 Carpinus fangiana HOM05D001476 ORTHO05D002681 3.8e-244 848.2 596 72.1
arahy.Tifrunner.gnm1.ann1.VBIR99 Arachis hypogaea HOM05D001476 ORTHO05D006149 5.0e-244 847.8 578 74.2
arahy.Tifrunner.gnm1.ann1.5UT5JQ Arachis hypogaea HOM05D001476 ORTHO05D006149 1.1e-243 846.7 578 74.2
CDE03G0023 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 7.2e-243 844.0 591 69.9
Os03g0825700 Oryza sativa ssp. japonica HOM05D001476 ORTHO05D006149 1.6e-237 826.2 595 68.4
Pp3c20_710 Physcomitrium patens HOM05D001476 ORTHO05D006149 2.9e-199 699.1 597 59.8
Ah.11g045320 Amaranthus hybridus HOM05D001476 ORTHO05D006149 5.4e-198 694.9 575 62.4
Mapoly0103s0063 Marchantia polymorpha HOM05D001476 ORTHO05D006149 7.1e-198 694.5 579 59.4
RcHm_v2.0_Chr3g0463911 Rosa chinensis HOM05D001476 ORTHO05D006149 1.3e-188 663.7 435 76.8
MSTRG.5600 Avicennia marina HOM05D001476 ORTHO05D006149 7.3e-187 657.9 421 78.1
SMO145G0033 Selaginella moellendorffii HOM05D001476 ORTHO05D006149 3.1e-185 652.5 546 58.8
Sabra06G0073800 Salix brachista HOM05D001476 ORTHO05D002681 7.6e-184 647.9 575 61.6
Sabra16G0107400 Salix brachista HOM05D001476 ORTHO05D006149 2.4e-182 642.9 572 60.8
TPR.G6686 Trifolium pratense HOM05D001476 ORTHO05D006149 2.4e-174 616.3 384 76.8
AUR62043525 Chenopodium quinoa HOM05D001476 ORTHO05D006149 1.3e-172 610.5 384 76.3
SEGI_02222 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 5.8e-168 595.1 406 71.9
AUR62044509 Chenopodium quinoa HOM05D001476 ORTHO05D006149 2.4e-166 589.7 341 80.9
COL.COLO4_14599 Corchorus olitorius HOM05D001476 ORTHO05D006149 3.5e-165 585.9 352 81.0
AUR62043103 Chenopodium quinoa HOM05D001476 ORTHO05D006149 1.5e-163 580.5 365 75.9
vmacro17486 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 4.6e-149 532.3 467 62.7
AagrBONN_evm.TU.Sc2ySwM_369.563 Anthoceros agrestis HOM05D001476 ORTHO05D006149 2.1e-125 453.8 381 60.4
SHI12784 Sapria himalayana HOM05D001476 ORTHO05D006149 2.4e-121 440.3 305 70.8
Cre04.g214097 Chlamydomonas reinhardtii HOM05D001476 ORTHO05D006149 2.4e-113 413.7 495 43.8
BcaC09g47968 Brassica carinata HOM05D001476 ORTHO05D006149 2.8e-106 390.2 297 66.7
MCO10G178 Micromonas commoda HOM05D001476 ORTHO05D006149 9.2e-105 385.2 578 39.4
SHI12782 Sapria himalayana HOM05D001476 ORTHO05D006149 1.2e-101 374.8 298 66.8
CBR_g8542 Chara braunii HOM05D001476 ORTHO05D006149 3.1e-100 370.2 392 49.7
PRCOL_00002974 Prasinoderma coloniale HOM05D001476 ORTHO05D006149 1.5e-99 367.9 484 40.9
Actinidia29132 Actinidia chinensis HOM05D001476 ORTHO05D006149 3.7e-82 310.1 552 39.1
RcHm_v2.0_Chr3g0463901 Rosa chinensis HOM05D001476 ORTHO05D006149 5.6e-70 269.6 165 77.6
AUR62043102 Chenopodium quinoa HOM05D001476 ORTHO05D006149 1.4e-68 265.0 230 60.9
Dinv37085 Davidia involucrata HOM05D001476 ORTHO05D002681 1.2e-51 208.8 327 42.2
COL.COLO4_14600 Corchorus olitorius HOM05D001476 ORTHO05D006149 1.9e-49 201.4 114 83.3
Hund31411 Selenicereus undatus HOM05D001476 ORTHO05D006149 2.2e-42 177.9 104 79.8
vmacro17485 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 2.8e-37 161.0 106 74.5
SEGI_09667 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 6.5e-34 149.8 107 64.5
AUR62043524 Chenopodium quinoa HOM05D001476 ORTHO05D006149 2.6e-27 127.9 128 54.7
Rhsim09G0090000 Rhododendron simsii HOM05D001476 ORTHO05D034934 5.3e-12 77.0 79 57.0
TAR629G0215 Trochodendron aralioides HOM05D000393 ORTHO05D000275 1.2e-11 75.9 54 63.0
TAR636G0366 Trochodendron aralioides HOM05D001476 ORTHO05D006149 2.6e-11 74.7 53 71.7
TAR381G0471 Trochodendron aralioides HOM05D000141 ORTHO05D000780 8.5e-10 69.7 94 53.2
TAR636G0462 Trochodendron aralioides HOM05D001476 ORTHO05D006149 6.8e-07 60.1 75 53.3
TAR626G1231 Trochodendron aralioides HOM05D000393 ORTHO05D000275 2.6e-06 58.2 53 52.8
Rhsim05G0112000 Rhododendron simsii HOM05D047264 ORTHO05D021376 9.7e-06 56.2 61 52.5


User provided reference genes

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