Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 5.4e-53 210.7 103 100.0
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-49 199.5 103 94.2
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-49 199.5 103 94.2
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-49 199.5 103 94.2
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 3.6e-49 198.0 103 93.2
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 5.8e-47 190.7 103 90.3
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 8.3e-46 186.8 103 88.3
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 1.1e-45 186.4 103 87.4
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 5.4e-45 184.1 103 86.4
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 9.2e-45 183.3 103 86.4
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-44 183.0 103 87.4
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-44 183.0 103 87.4
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-44 183.0 103 87.4
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.2e-44 183.0 103 87.4
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 2.0e-44 182.2 103 85.4
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 3.5e-44 181.4 103 84.5
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 4.6e-44 181.0 103 86.4
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 1.3e-43 179.5 103 84.5
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 1.7e-43 179.1 102 83.3
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 5.0e-43 177.6 103 84.5
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 8.6e-43 176.8 103 81.6
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 1.1e-42 176.4 103 82.5
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 1.1e-42 176.4 103 83.5
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 5.6e-42 174.1 103 81.6
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 7.3e-42 173.7 103 83.5
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 9.5e-42 173.3 103 81.6
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 9.5e-42 173.3 103 81.6
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 3.6e-41 171.4 105 81.9
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 3.6e-41 171.4 105 81.9
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 8.0e-41 170.2 103 82.5
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 2.3e-40 168.7 103 79.6
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 81.6
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 3.1e-40 168.3 103 81.6
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.5e-39 166.0 90 88.9
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 2.0e-39 165.6 103 81.6
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 2.0e-39 165.6 103 81.6
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 2.0e-39 165.6 103 81.6
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 2.0e-39 165.6 103 81.6
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.6e-39 165.2 103 78.6
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.4e-39 164.9 103 78.6
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 4.4e-39 164.5 100 79.0
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 4.4e-39 164.5 102 80.4
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 5.8e-39 164.1 103 80.6
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 3.7e-38 161.4 94 79.8
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.4e-37 157.5 103 75.7
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 7.0e-37 157.1 103 79.6
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 6.6e-35 150.6 103 73.8
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 1.9e-34 149.1 103 70.9
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 1.9e-34 149.1 103 70.9
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 1.9e-34 149.1 103 70.9
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 1.9e-34 149.1 103 70.9
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 1.9e-34 149.1 103 70.9
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 1.9e-34 149.1 103 70.9
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 1.9e-34 149.1 103 70.9
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 1.9e-34 149.1 103 70.9
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 3.6e-33 144.8 86 76.7
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 9.9e-31 136.7 77 84.4
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 4.9e-30 134.4 103 68.0
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 1.2e-28 129.8 64 98.4
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 1.6e-28 129.4 76 80.3
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 3.9e-27 124.8 107 60.7
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 5.1e-27 124.4 93 69.9
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 4.3e-26 121.3 101 59.4
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 4.3e-26 121.3 66 86.4
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 2.8e-25 118.6 83 71.1
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 3.6e-25 118.2 71 80.3
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.1e-24 116.7 83 69.9
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 4.4e-23 111.3 64 82.8
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 9.9e-23 110.2 83 62.7
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 7.1e-21 104.0 78 64.1
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 1.2e-20 103.2 78 64.1
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 6.6e-19 97.4 73 64.4
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 9.6e-18 93.6 63 73.0
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 9.6e-18 93.6 61 75.4
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 2.1e-17 92.4 55 78.2
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 2.8e-17 92.0 75 62.7
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 6.2e-17 90.9 56 78.6
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 1.4e-16 89.7 58 77.6
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 4.0e-16 88.2 42 95.2
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 1.2e-15 86.7 51 80.4
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 2.0e-15 85.9 45 88.9
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 2.0e-15 85.9 45 88.9
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 2.0e-15 85.9 45 88.9
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 2.0e-15 85.9 45 88.9
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 2.6e-15 85.5 56 75.0
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 2.6e-15 85.5 56 75.0
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 2.6e-15 85.5 56 75.0
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 3.4e-15 85.1 50 80.0
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 5.8e-15 84.3 49 81.6
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 2.2e-14 82.4 50 78.0
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 8.4e-14 80.5 49 77.6
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 1.4e-13 79.7 49 75.5
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 9.3e-13 77.0 58 72.4
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.6e-12 76.3 37 97.3
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 2.1e-12 75.9 98 49.0
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 4.6e-12 74.7 50 72.0
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 4.3e-10 68.2 52 61.5
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 2.8e-09 65.5 93 46.2
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 4.8e-09 64.7 101 39.6
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 4.8e-09 64.7 101 39.6
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.8e-08 62.8 34 82.4
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 9.9e-07 57.0 33 81.8
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.9e-06 55.5 30 86.7


User provided reference genes

Program Settings