Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 9.4e-130 466.8 234 100.0
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 8.1e-105 384.0 231 83.5
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.5e-103 379.8 231 84.8
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 5.3e-80 301.6 216 64.8
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 5.3e-80 301.6 231 66.2
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 7.6e-79 297.7 214 69.2
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 9.9e-79 297.4 222 65.8
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 6.4e-78 294.7 219 67.6
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 1.4e-77 293.5 220 66.4
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 2.4e-77 292.7 202 69.8
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 4.2e-77 292.0 215 66.0
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 5.4e-77 291.6 216 65.7
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.2e-76 290.4 206 69.4
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 2.1e-76 289.7 206 68.4
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 4.6e-76 288.5 197 71.1
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 6.0e-76 288.1 208 66.8
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 6.0e-76 288.1 209 67.0
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 7.9e-76 287.7 198 71.2
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.8e-75 286.6 212 66.5
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 3.9e-75 285.4 185 69.7
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 8.7e-75 284.3 195 71.3
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 1.9e-74 283.1 197 68.0
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 2.5e-74 282.7 217 64.1
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 3.3e-74 282.3 204 68.6
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 4.3e-74 282.0 217 65.0
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.3e-73 280.4 204 67.2
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 2.8e-73 279.3 213 61.5
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.8e-73 279.3 213 63.4
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 2.8e-73 279.3 213 63.4
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 4.8e-73 278.5 205 64.4
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 4.8e-73 278.5 206 65.5
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 6.2e-73 278.1 226 61.5
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 6.2e-73 278.1 203 67.0
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 6.2e-73 278.1 195 68.2
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 1.1e-72 277.3 205 65.4
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 2.4e-72 276.2 205 64.9
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 3.1e-72 275.8 206 65.0
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 3.1e-72 275.8 206 65.0
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 5.3e-72 275.0 212 62.7
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 6.9e-72 274.6 205 64.4
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 6.9e-72 274.6 207 64.7
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 1.5e-71 273.5 203 67.5
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 1.5e-71 273.5 220 63.2
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 2.0e-71 273.1 207 64.7
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 2.6e-71 272.7 217 62.7
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 2.6e-71 272.7 197 68.0
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 2.6e-71 272.7 208 63.9
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 4.5e-71 271.9 198 65.2
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 4.5e-71 271.9 209 62.7
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 5.8e-71 271.6 205 64.4
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.7e-70 270.0 222 63.1
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 1.7e-70 270.0 212 60.4
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.7e-70 270.0 204 64.2
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 2.2e-70 269.6 240 57.9
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 2.2e-70 269.6 219 60.7
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 2.2e-70 269.6 196 65.3
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 2.9e-70 269.2 184 68.5
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 2.9e-70 269.2 194 67.0
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 3.8e-70 268.9 200 66.5
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 3.8e-70 268.9 195 67.7
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.1e-69 267.3 203 64.5
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 2.4e-69 266.2 198 65.2
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.6e-68 263.5 231 57.6
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 1.6e-68 263.5 209 60.8
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 2.5e-66 256.1 219 59.4
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 5.6e-66 255.0 215 61.4
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 6.2e-65 251.5 191 64.4
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 7.6e-63 244.6 179 65.9
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 5.5e-61 238.4 201 58.7
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.8e-59 233.4 178 65.2
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 6.7e-59 231.5 205 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 8.2e-57 224.6 218 51.4
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.4e-56 223.8 223 52.0
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 1.7e-54 216.9 192 53.6
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 5.0e-54 215.3 227 50.2
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 2.7e-52 209.5 152 66.4
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 1.3e-51 207.2 192 53.1
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 2.3e-51 206.5 195 56.9
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 8.2e-49 198.0 162 60.5
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 1.1e-45 187.6 131 69.5
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 5.5e-45 185.3 150 62.0
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 6.1e-44 181.8 134 66.4
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 5.5e-37 158.7 210 43.8
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 1.6e-36 157.1 217 42.4
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 1.6e-36 157.1 122 61.5
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 2.1e-36 156.8 96 70.8
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 5.7e-34 148.7 173 48.0
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 6.7e-27 125.2 80 71.2
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 5.9e-23 112.1 88 63.6
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 7.7e-23 111.7 195 39.0
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 3.8e-22 109.4 83 65.1
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 5.0e-22 109.0 91 59.3
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 1.6e-20 104.0 87 60.9
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 1.2e-12 77.8 57 63.2
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 2.2e-09 67.0 85 45.9
PRCOL_00002242 Prasinoderma coloniale HOM05D060700 ORTHO05D009694 2.9e-06 56.6 159 30.2


User provided reference genes

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