Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.7e-282 975.3 496 100.0
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 4.2e-252 874.4 496 88.7
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 5.4e-252 874.0 496 89.3
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.1e-249 866.3 493 88.2
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 2.1e-227 792.3 493 82.8
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 6.5e-213 744.2 409 90.7
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 5.4e-175 618.2 499 65.3
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.2e-174 617.1 496 64.7
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 3.4e-169 599.0 424 69.3
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.1e-167 594.0 490 63.3
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 6.0e-166 588.2 453 65.3
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 8.6e-165 584.3 478 61.9
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 4.3e-164 582.0 496 61.3
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 7.1e-159 564.7 489 61.1
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 9.2e-159 564.3 484 60.7
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 6.0e-158 561.6 425 66.6
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 7.8e-158 561.2 464 62.7
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 3.3e-156 555.8 449 62.4
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 7.3e-156 554.7 489 59.3
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 9.5e-156 554.3 495 59.0
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.4e-154 550.4 454 61.9
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.1e-154 549.3 457 60.6
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 4.0e-154 548.9 460 60.7
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 4.0e-154 548.9 460 60.7
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 5.2e-154 548.5 493 57.0
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 2.0e-153 546.6 460 60.7
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 2.0e-153 546.6 475 58.9
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 2.6e-153 546.2 491 58.9
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 3.4e-153 545.8 478 57.3
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 4.4e-153 545.4 424 64.9
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 7.6e-153 544.7 450 60.7
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.3e-152 543.9 422 63.7
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.2e-152 543.1 449 59.9
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 2.9e-152 542.7 423 63.4
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 1.1e-151 540.8 419 64.7
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.4e-151 540.4 449 59.7
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 3.2e-151 539.3 474 58.9
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 3.2e-151 539.3 563 52.6
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 4.1e-151 538.9 496 56.9
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 5.4e-151 538.5 426 62.0
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 5.4e-151 538.5 423 63.1
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 9.2e-151 537.7 449 59.5
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.2e-150 537.3 478 56.3
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 2.1e-150 536.6 493 56.6
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 2.1e-150 536.6 427 60.7
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 3.5e-150 535.8 498 56.4
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 3.5e-150 535.8 492 57.1
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 4.6e-150 535.4 422 63.5
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 7.8e-150 534.6 478 59.2
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.7e-149 533.5 478 59.0
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.7e-149 533.5 427 61.1
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 3.9e-149 532.3 482 55.6
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.5e-148 530.4 431 60.8
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 4.3e-148 528.9 428 61.0
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 7.3e-148 528.1 422 61.1
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.2e-147 527.3 444 59.5
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 8.1e-147 524.6 451 58.3
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 1.4e-146 523.9 457 61.1
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 1.8e-146 523.5 472 57.2
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.5e-145 520.4 478 57.9
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 3.4e-145 519.2 467 56.5
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 7.6e-145 518.1 421 60.8
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.7e-144 516.9 459 56.9
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 3.8e-144 515.8 505 54.5
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 8.4e-144 514.6 427 61.8
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.1e-143 514.2 429 59.2
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 1.4e-143 513.8 437 57.4
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 9.3e-143 511.1 461 58.8
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 9.3e-143 511.1 438 58.4
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.2e-142 510.8 429 59.0
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 6.0e-142 508.4 455 59.1
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.7e-141 506.9 422 58.3
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.5e-140 503.8 427 57.6
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.5e-140 503.8 422 58.1
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 2.8e-139 499.6 450 56.7
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 2.8e-139 499.6 440 59.3
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.3e-136 490.7 445 56.4
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 3.8e-136 489.2 427 57.8
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 8.4e-136 488.0 393 61.1
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.2e-134 484.2 534 52.4
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 3.0e-133 479.6 496 54.2
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.1e-132 477.6 422 57.6
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.1e-130 471.1 488 51.4
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 4.5e-129 465.7 374 60.4
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 4.5e-129 465.7 478 51.3
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 7.6e-129 464.9 419 55.6
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 5.5e-127 458.8 436 55.7
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.2e-126 457.6 414 57.2
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 2.7e-126 456.4 368 61.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 6.0e-126 455.3 510 48.6
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 2.3e-125 453.4 418 54.3
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 3.1e-122 443.0 364 59.1
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 4.5e-121 439.1 368 56.8
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 2.0e-113 413.7 389 58.1
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.5e-111 406.8 422 50.5
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.5e-103 380.2 285 67.4
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.9e-101 372.9 430 48.4
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.4e-100 369.4 428 48.1
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 5.0e-96 355.9 424 44.1
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.8e-91 340.1 437 42.1
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.5e-84 317.8 403 43.4
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.0e-84 317.4 303 53.1
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.7e-83 313.2 222 68.0
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 3.5e-81 306.6 372 47.0
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.0e-80 305.1 438 38.8
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 4.1e-66 256.5 251 55.8
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.6e-65 254.6 307 47.9
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 7.5e-60 235.7 199 60.3
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.1e-50 205.3 440 33.9
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 7.8e-49 199.1 458 33.4
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 8.6e-48 195.7 234 44.4
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.3e-35 155.2 134 62.7
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 1.1e-34 152.1 129 60.5
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.1e-31 142.1 111 61.3
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.6e-30 138.3 118 57.6
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.3e-27 128.6 93 65.6
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 3.8e-27 127.1 106 55.7
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.0e-24 117.5 81 71.6
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.5e-23 115.2 401 25.7
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 9.9e-20 102.4 70 68.6
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 5.6e-15 86.7 90 45.6
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 4.5e-12 77.0 81 60.5
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 5.8e-12 76.6 75 50.7
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.7e-11 75.1 72 56.9
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.9e-11 74.3 53 62.3
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 4.6e-09 67.0 48 70.8


User provided reference genes

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