Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 6.0e-86 320.9 168 100.0
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 2.5e-52 209.1 151 74.8
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 1.8e-50 203.0 154 72.1
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 5.3e-50 201.4 154 72.7
Sopen06g014330 Solanum pennellii HOM05D000014 ORTHO05D010301 9.7e-44 180.6 154 64.9
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 1.1e-34 150.6 153 60.1
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 1.6e-33 146.7 124 67.7
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 4.7e-30 135.2 123 61.8
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 5.4e-18 95.1 154 43.5
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 2.3e-13 79.7 145 40.0
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 6.8e-13 78.2 146 41.1
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 1.5e-12 77.0 155 38.7
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 2.0e-12 76.6 124 42.7
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 7.5e-12 74.7 156 35.9
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 7.0e-10 68.2 129 39.5
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 7.8e-09 64.7 113 40.7
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.3e-08 63.9 90 42.2
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 1.3e-08 63.9 110 41.8
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 1.7e-08 63.5 134 37.3
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 3.0e-08 62.8 125 36.0
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 3.9e-08 62.4 143 33.6
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 3.9e-08 62.4 89 46.1
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 5.0e-08 62.0 153 32.0
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 8.6e-08 61.2 112 36.6
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.1e-07 60.8 160 31.2
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 1.1e-07 60.8 160 31.2
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 1.1e-07 60.8 156 32.7
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 1.1e-07 60.8 105 41.9
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 1.1e-07 60.8 87 43.7
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 1.5e-07 60.5 80 45.0
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 1.9e-07 60.1 138 35.5
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 1.9e-07 60.1 65 49.2
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 2.5e-07 59.7 107 36.4
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 3.3e-07 59.3 58 55.2
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 7.3e-07 58.2 95 37.9
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 9.5e-07 57.8 139 36.0
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 1.6e-06 57.0 90 38.9
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 2.1e-06 56.6 125 33.6
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.1e-06 56.6 142 31.0
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 2.8e-06 56.2 118 33.9
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 2.8e-06 56.2 66 45.5
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 2.8e-06 56.2 67 43.3
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 4.7e-06 55.5 73 43.8
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 4.7e-06 55.5 73 43.8
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 6.2e-06 55.1 98 35.7
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 6.2e-06 55.1 98 35.7
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 8.0e-06 54.7 88 44.3
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 8.0e-06 54.7 112 32.1
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 8.0e-06 54.7 96 35.4
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 8.0e-06 54.7 81 39.5


User provided reference genes

Program Settings