Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1193.2 Capsicum annuum HOM05D003492 ORTHO05D019467 2.3e-81 305.4 147 100.0
CAN.G78.72 Capsicum annuum HOM05D003492 ORTHO05D019467 1.6e-66 256.1 131 94.7
Sopen06g014600 Solanum pennellii HOM05D003492 ORTHO05D005115 1.4e-51 206.5 132 78.0
Nitab4.5_0011089g0010 Nicotiana tabacum HOM05D003492 ORTHO05D005115 1.1e-46 190.3 128 78.1
Actinidia13944 Actinidia chinensis HOM05D003492 ORTHO05D005115 5.0e-28 128.3 130 52.3
TAR623G0495 Trochodendron aralioides HOM05D003492 ORTHO05D005115 2.5e-27 125.9 129 48.8
Dinv10611 Davidia involucrata HOM05D003492 ORTHO05D005115 5.5e-27 124.8 131 49.6
Rhsim09G0177900 Rhododendron simsii HOM05D003492 ORTHO05D005115 2.1e-26 122.9 128 49.2
MSTRG.8339 Avicennia marina HOM05D003492 ORTHO05D005115 3.6e-26 122.1 131 45.0
Cc02_g06300 Coffea canephora HOM05D003492 ORTHO05D005115 1.4e-25 120.2 131 51.1
Prupe.2G252000 Prunus persica HOM05D003492 ORTHO05D005115 1.8e-25 119.8 125 48.8
Sed0003450 Sechium edule HOM05D003492 ORTHO05D005115 1.8e-25 119.8 148 46.6
CsaV3_5G010260 Cucumis sativus L. HOM05D003492 ORTHO05D005115 2.3e-25 119.4 128 49.2
vmacro10035 Vaccinium macrocarpon HOM05D003492 ORTHO05D005115 2.3e-25 119.4 130 49.2
CSS0013780 Camellia sinensis var. sinensis HOM05D003492 ORTHO05D005115 3.0e-25 119.0 130 45.4
MD07G1223400 Malus domestica HOM05D003492 ORTHO05D005115 6.8e-25 117.9 126 47.6
MELO3C026794.2 Cucumis melo HOM05D003492 ORTHO05D005115 8.8e-25 117.5 127 48.0
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.5e-24 116.7 126 43.7
Cpa.g.sc19.161 Carica papaya HOM05D003492 ORTHO05D005115 1.5e-24 116.7 126 46.8
SalBow5G5368 Salvia bowleyana HOM05D003492 ORTHO05D005115 1.5e-24 116.7 124 50.0
ClCG07G004320 Citrullus lanatus HOM05D003492 ORTHO05D005115 2.0e-24 116.3 127 47.2
Lj8C65T9 Lonicera japonica HOM05D003492 ORTHO05D019467 2.0e-24 116.3 127 49.6
Medtr5g082890 Medicago truncatula HOM05D003492 ORTHO05D005115 7.5e-24 114.4 124 43.5
TPR.G38386 Trifolium pratense HOM05D003492 ORTHO05D005115 7.5e-24 114.4 124 43.5
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea HOM05D003492 ORTHO05D005115 1.3e-23 113.6 124 42.7
Manes.07G131200 Manihot esculenta HOM05D003492 ORTHO05D005115 1.3e-23 113.6 129 45.0
FvH4_7g24630 Fragaria vesca HOM05D003492 ORTHO05D005115 1.7e-23 113.2 127 47.2
FAN06G4945 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.7e-23 113.2 127 47.2
HanXRQChr14g0459601 Helianthus annuus HOM05D003492 ORTHO05D005115 2.8e-23 112.5 126 47.6
GSVIVG01032797001 Vitis vinifera HOM05D003492 ORTHO05D005115 2.8e-23 112.5 134 44.8
AUR62012268 Chenopodium quinoa HOM05D003492 ORTHO05D005115 6.3e-23 111.3 127 42.5
DCAR_011823 Daucus carota HOM05D003492 ORTHO05D005115 6.3e-23 111.3 131 41.2
Glyma.02G258100 Glycine max HOM05D003492 ORTHO05D005115 6.3e-23 111.3 124 42.7
PSO384G0172 Papaver somniferum HOM05D003492 ORTHO05D005115 8.3e-23 110.9 125 41.6
Hund15919 Selenicereus undatus HOM05D003492 ORTHO05D005115 8.3e-23 110.9 122 45.1
FAN01G1605 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.1e-22 110.5 127 45.7
PSO339G2087 Papaver somniferum HOM05D003492 ORTHO05D005115 1.1e-22 110.5 125 43.2
FAN10G4174 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.4e-22 110.2 127 46.5
Phvul.008G222900 Phaseolus vulgaris HOM05D003492 ORTHO05D005115 1.4e-22 110.2 124 41.9
RcHm_v2.0_Chr1g0370461 Rosa chinensis HOM05D003492 ORTHO05D005115 1.4e-22 110.2 133 43.6
Ah.16g103640 Amaranthus hybridus HOM05D003492 ORTHO05D005115 1.8e-22 109.8 125 44.0
CiPaw.01G300000 Carya illinoinensis HOM05D003492 ORTHO05D005115 1.8e-22 109.8 126 44.4
AUR62022903 Chenopodium quinoa HOM05D003492 ORTHO05D005115 1.8e-22 109.8 127 43.3
FAN03G1412 Fragaria x ananassa HOM05D003492 ORTHO05D005115 1.8e-22 109.8 127 46.5
CANSAT56G1673 Cannabis sativa HOM05D003492 ORTHO05D005115 2.4e-22 109.4 122 44.3
Ca_05974_v3 Cicer arietinum L. HOM05D003492 ORTHO05D005115 2.4e-22 109.4 124 41.1
Ciclev10030498m.g Citrus clementina HOM05D003492 ORTHO05D005115 2.4e-22 109.4 124 46.8
Sabra08G0051700 Salix brachista HOM05D003492 ORTHO05D005115 2.4e-22 109.4 124 45.2
Nn2g10890 Nelumbo nucifera HOM05D003492 ORTHO05D005115 3.1e-22 109.0 125 44.0
Potri.008G070300 Populus trichocarpa HOM05D003492 ORTHO05D005115 3.1e-22 109.0 127 43.3
QL08p063313 Quercus lobata HOM05D003492 ORTHO05D005115 3.1e-22 109.0 130 41.5
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 4.1e-22 108.6 133 42.1
Psat2g032000 Pisum sativum HOM05D003492 ORTHO05D005115 4.1e-22 108.6 124 43.5
Glyma.14G058400 Glycine max HOM05D003492 ORTHO05D005115 5.4e-22 108.2 124 41.1
LjContig00357g0011776 Lotus japonicus HOM05D003492 ORTHO05D005115 5.4e-22 108.2 124 42.7
Eucgr.G03070 Eucalyptus grandis HOM05D003492 ORTHO05D005115 7.0e-22 107.8 132 42.4
VMungo0647G1152 Vigna mungo HOM05D003492 ORTHO05D005115 1.2e-21 107.1 124 40.3
Lalb_Chr04g0250511 Lupinus albus HOM05D003492 ORTHO05D005115 2.0e-21 106.3 124 40.3
Gohir.A10G240100 Gossypium hirsutum HOM05D003492 ORTHO05D005115 3.5e-21 105.5 126 43.7
Sc11g0005130 Simmondsia chinensis HOM05D003492 ORTHO05D005115 7.7e-21 104.4 129 42.6
TWI09G0940 Tripterygium wilfordii HOM05D003492 ORTHO05D005115 7.7e-21 104.4 126 41.3
Actinidia00955 Actinidia chinensis HOM05D003492 ORTHO05D019467 1.0e-20 104.0 107 52.3
EL10Ac2g04850 Beta vulgaris HOM05D003492 ORTHO05D005115 1.0e-20 104.0 125 39.2
Atru.chr12.67 Acer truncatum HOM05D003492 ORTHO05D005115 1.3e-20 103.6 127 41.7
Migut.F01404 Erythranthe guttata HOM05D003492 ORTHO05D005115 1.3e-20 103.6 127 42.5
Gohir.D10G252000 Gossypium hirsutum HOM05D003492 ORTHO05D005115 1.3e-20 103.6 126 42.9
Gorai.011G292500 Gossypium raimondii HOM05D003492 ORTHO05D005115 1.3e-20 103.6 126 42.9
SHI03327 Sapria himalayana HOM05D003492 ORTHO05D000001 2.9e-20 102.4 126 44.4
Lsat_1_v5_gn_2_124500 Lactuca sativa HOM05D003492 ORTHO05D005115 5.0e-20 101.7 140 37.9
Aqoxy4G02502 Aquilegia oxysepala HOM05D003492 ORTHO05D005115 8.6e-20 100.9 125 40.8
THA.LOC104816541 Tarenaya hassleriana HOM05D003492 ORTHO05D005115 1.1e-19 100.5 135 42.2
ECA238G3428 Erigeron canadensis HOM05D003492 ORTHO05D005115 1.5e-19 100.1 133 42.1
SGA_v2.0_scaffold365G49997 Striga asiatica HOM05D003492 ORTHO05D005115 1.5e-19 100.1 132 38.6
C02p02390 Brassica napus HOM05D003492 ORTHO05D005115 3.3e-19 99.0 129 43.4
BolC2t06204H Brassica oleracea HOM05D003492 ORTHO05D005115 3.3e-19 99.0 129 43.4
BcaB01g05759 Brassica carinata HOM05D003492 ORTHO05D005115 5.5e-19 98.2 133 42.1
Thhalv10012420m.g Eutrema salsugineum HOM05D003492 ORTHO05D005115 7.2e-19 97.8 130 42.3
unitig_60.g25675 Utricularia gibba HOM05D003492 ORTHO05D005115 9.5e-19 97.4 125 42.4
Duzib106G0351 Durio zibethinus HOM05D003492 ORTHO05D005115 1.2e-18 97.1 128 41.4
BcaB01g05953 Brassica carinata HOM05D003492 ORTHO05D005115 2.1e-18 96.3 133 41.4
BolC3t12820H Brassica oleracea HOM05D003492 ORTHO05D005115 2.1e-18 96.3 133 41.4
BraA02t04853Z Brassica rapa HOM05D003492 ORTHO05D005115 3.6e-18 95.5 129 42.6
C03p02660 Brassica napus HOM05D003492 ORTHO05D005115 1.8e-17 93.2 129 41.1
Carub.0006s0446 Capsella rubella HOM05D003492 ORTHO05D005115 1.8e-17 93.2 134 39.6
A03p02330 Brassica napus HOM05D003492 ORTHO05D005115 3.0e-17 92.4 133 40.6
BraA03t09597Z Brassica rapa HOM05D003492 ORTHO05D005115 5.2e-17 91.7 133 40.6
CARHR207700 Cardamine hirsuta HOM05D003492 ORTHO05D005115 5.2e-17 91.7 131 42.0
AL6G15450 Arabidopsis lyrata HOM05D003492 ORTHO05D005115 6.8e-17 91.3 133 39.1
AT5G05560 Arabidopsis thaliana HOM05D003492 ORTHO05D005115 6.8e-17 91.3 133 38.3
PGR142G1812 Punica granatum HOM05D003492 ORTHO05D005115 6.8e-17 91.3 131 38.9
HPP92_012039 Vanilla planifolia HOM05D003492 ORTHO05D005115 8.9e-17 90.9 129 39.5
Cfa001305 Carpinus fangiana HOM05D003492 ORTHO05D005115 3.4e-16 89.0 92 47.8
Sp6g37310 Schrenkiella parvula HOM05D003492 ORTHO05D005115 5.7e-16 88.2 133 39.8
Os05g0354300 Oryza sativa ssp. japonica HOM05D003492 ORTHO05D005115 8.3e-15 84.3 127 36.2
Haze_17240 Corylus avellana HOM05D003492 ORTHO05D005115 1.1e-11 73.9 81 45.7
ATR0681G383 Amborella trichopoda HOM05D003492 ORTHO05D005115 2.5e-11 72.8 138 34.1
Aa31LG11G6620 Aethionema arabicum HOM05D003492 ORTHO05D005115 2.1e-10 69.7 108 38.9
Nitab4.5_0000797g0050 Nicotiana tabacum HOM05D003492 ORTHO05D005115 3.7e-07 58.9 35 82.9


User provided reference genes

Program Settings