Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1184.4 Capsicum annuum HOM05D001331 ORTHO05D001157 2.9e-99 365.2 177 100.0
Nitab4.5_0000892g0020 Nicotiana tabacum HOM05D001331 ORTHO05D001157 2.2e-30 136.3 220 44.1
Nitab4.5_0008598g0010 Nicotiana tabacum HOM05D001331 ORTHO05D001157 7.9e-28 127.9 220 41.8
Nitab4.5_0002468g0080 Nicotiana tabacum HOM05D001331 ORTHO05D001157 2.8e-25 119.4 189 45.0
CAN.G1393.14 Capsicum annuum HOM05D001331 ORTHO05D001157 3.7e-25 119.0 219 39.3
PGSC0003DMG400025255 Solanum tuberosum HOM05D001331 ORTHO05D001157 2.0e-23 113.2 234 36.8
Sopen01g033690 Solanum pennellii HOM05D001331 ORTHO05D001157 2.6e-23 112.8 110 54.5
Solyc01g086690.2 Solanum lycopersicum HOM05D001331 ORTHO05D001157 1.7e-22 110.2 110 54.5
Peaxi162Scf00058g00049 Petunia axillaris HOM05D001331 ORTHO05D001157 1.5e-18 97.1 223 36.3
Sopen02g031270 Solanum pennellii HOM05D018915 ORTHO05D019375 1.3e-17 94.0 173 41.0
CAN.G1799.1 Capsicum annuum HOM05D001331 ORTHO05D001157 4.8e-17 92.0 72 65.3
CAN.G1799.6 Capsicum annuum HOM05D001331 ORTHO05D001157 4.8e-17 92.0 72 65.3
Solyc01g058680.2 Solanum lycopersicum HOM05D018915 ORTHO05D019375 1.4e-16 90.5 105 52.4
Solyc02g086540.3 Solanum lycopersicum HOM05D001331 ORTHO05D001157 5.3e-16 88.6 105 52.4
Cc02_g27380 Coffea canephora HOM05D001331 ORTHO05D001157 3.5e-12 75.9 115 43.5
MSTRG.28084 Avicennia marina HOM05D001331 ORTHO05D001157 1.3e-11 73.9 116 40.5
Dinv43910 Davidia involucrata HOM05D001331 ORTHO05D001157 5.1e-11 72.0 209 32.5
Dinv43475 Davidia involucrata HOM05D001331 ORTHO05D001157 6.7e-11 71.6 202 32.2
QL04p004796 Quercus lobata HOM05D001331 ORTHO05D001157 6.7e-11 71.6 103 45.6
Nitab4.5_0003318g0130 Nicotiana tabacum HOM05D001331 ORTHO05D001157 1.5e-10 70.5 97 44.3
Dinv00376 Davidia involucrata HOM05D001331 ORTHO05D001157 1.9e-10 70.1 202 31.7
MD02G1316900 Malus domestica HOM05D001331 ORTHO05D001157 1.9e-10 70.1 111 41.4
TAR369G1001 Trochodendron aralioides HOM05D001331 ORTHO05D001157 2.2e-09 66.6 100 45.0
TWI09G0060 Tripterygium wilfordii HOM05D001331 ORTHO05D001157 4.8e-09 65.5 96 43.8
CiPaw.11G071700 Carya illinoinensis HOM05D001331 ORTHO05D001157 8.2e-09 64.7 99 39.4
Oeu047541.1 Olea europaea HOM05D001331 ORTHO05D001157 8.2e-09 64.7 107 39.3
Manes.03G096000 Manihot esculenta HOM05D001331 ORTHO05D001157 1.1e-08 64.3 103 40.8
DCAR_015685 Daucus carota HOM05D001331 ORTHO05D001157 1.4e-08 63.9 104 41.3
SGA_v2.0_scaffold95G28786 Striga asiatica HOM05D001331 ORTHO05D001157 2.4e-08 63.2 116 37.9
TAR623G0247 Trochodendron aralioides HOM05D001331 ORTHO05D001157 2.4e-08 63.2 100 43.0
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 4.1e-08 62.4 103 39.8
Duzib268G0738 Durio zibethinus HOM05D001331 ORTHO05D001157 4.1e-08 62.4 93 44.1
Lj5C342T6 Lonicera japonica HOM05D001331 ORTHO05D001157 9.0e-08 61.2 103 40.8
Lj9C627T10 Lonicera japonica HOM05D001331 ORTHO05D001157 2.6e-07 59.7 104 41.3
Potri.001G225600 Populus trichocarpa HOM05D001331 ORTHO05D001157 2.6e-07 59.7 188 33.5
Haze_03244 Corylus avellana HOM05D001331 ORTHO05D001157 5.9e-07 58.5 100 40.0
Oeu010360.1 Olea europaea HOM05D001331 ORTHO05D001157 7.7e-07 58.2 105 37.1
SGA_v2.0_scaffold4G02244 Striga asiatica HOM05D001331 ORTHO05D001157 1.7e-06 57.0 117 35.0
GSVIVG01032038001 Vitis vinifera HOM05D001331 ORTHO05D001157 1.7e-06 57.0 179 33.5
Rhsim07G0053200 Rhododendron simsii HOM05D001331 ORTHO05D001157 5.0e-06 55.5 103 35.9
MD07G1005000 Malus domestica HOM05D001331 ORTHO05D001157 6.5e-06 55.1 95 41.1
ClCG04G000290 Citrullus lanatus HOM05D001331 ORTHO05D001157 8.5e-06 54.7 108 37.0
Migut.N01488 Erythranthe guttata HOM05D001331 ORTHO05D001157 8.5e-06 54.7 100 38.0
Gohir.A08G026800 Gossypium hirsutum HOM05D001331 ORTHO05D001157 8.5e-06 54.7 103 36.9


User provided reference genes

Program Settings