Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1183.7 Capsicum annuum HOM05D005573 ORTHO05D007161 3.9e-108 394.8 202 100.0
CAN.G551.66 Capsicum annuum HOM05D005573 ORTHO05D007161 2.2e-106 389.0 202 98.5
CAN.G65.126 Capsicum annuum HOM05D005573 ORTHO05D007161 2.2e-106 389.0 202 98.5
Hma1.2p1_0248F.1_g102160 Hydrangea macrophylla HOM05D005573 ORTHO05D007161 1.1e-99 366.7 202 92.6
Lsat_1_v5_gn_3_99201 Lactuca sativa HOM05D005573 ORTHO05D007161 9.7e-99 363.6 202 91.6
HanXRQChr02g0041471 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr02g0044961 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr07g0201021 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr08g0210291 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr10g0289201 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQChr11g0326731 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
HanXRQCPg0579941 Helianthus annuus HOM05D005573 ORTHO05D007161 2.2e-98 362.5 202 92.1
Migut.D01426 Erythranthe guttata HOM05D005573 ORTHO05D007161 8.2e-98 360.5 202 90.6
PGR111G0074 Punica granatum HOM05D005573 ORTHO05D007161 1.8e-97 359.4 202 90.1
arahy.Tifrunner.gnm1.ann1.DMW7HF Arachis hypogaea HOM05D005573 ORTHO05D007161 5.3e-97 357.8 202 89.6
Nn1g10181 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.6e-96 355.5 202 89.6
Nn1g10183 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.6e-96 355.5 202 89.6
DCAR_032486 Daucus carota HOM05D005573 ORTHO05D007161 1.1e-94 350.1 202 88.6
SalBow1G4134 Salvia bowleyana HOM05D005573 ORTHO05D007161 1.1e-94 350.1 202 88.6
PSO548G0019 Papaver somniferum HOM05D005573 ORTHO05D007161 2.5e-94 349.0 202 89.1
Sed0002328 Sechium edule HOM05D005573 ORTHO05D007161 4.2e-94 348.2 202 88.6
Sed0008322 Sechium edule HOM05D005573 ORTHO05D007161 4.2e-94 348.2 202 88.6
Medtr4g051220 Medicago truncatula HOM05D005573 ORTHO05D007161 1.6e-93 346.3 202 88.1
LjContig00318g0014176 Lotus japonicus HOM05D005573 ORTHO05D007161 6.1e-93 344.4 202 87.1
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 2.3e-92 342.4 202 87.1
Gohir.A08G157500 Gossypium hirsutum HOM05D005573 ORTHO05D007161 5.2e-92 341.3 202 87.1
CARHR282030 Cardamine hirsuta HOM05D005573 ORTHO05D007161 3.4e-91 338.6 202 87.1
A06p23260 Brassica napus HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
BNapus_Darmor_BZH_scaffold_287p00070 Brassica napus HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
BolSC45t60866H Brassica oleracea HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
BolSC45t60946H Brassica oleracea HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
BolSC46t60993H Brassica oleracea HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
BolSC46t61042H Brassica oleracea HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
BraA06t25428Z Brassica rapa HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
BraSC140t45578Z Brassica rapa HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
BraSC151t45711Z Brassica rapa HOM05D005573 ORTHO05D007161 4.4e-91 338.2 202 87.1
AL2G20730 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 3.7e-90 335.1 202 86.6
ATCG00380 Arabidopsis thaliana HOM05D005573 ORTHO05D007161 1.4e-89 333.2 202 86.1
AL2G21420 Arabidopsis lyrata HOM05D005573 ORTHO05D007161 1.8e-89 332.8 202 86.1
Lj2P1237T91 Lonicera japonica HOM05D005573 ORTHO05D007161 3.5e-88 328.6 204 86.3
Lj2P1239T179 Lonicera japonica HOM05D005573 ORTHO05D007161 3.5e-88 328.6 204 86.3
BolSC49t61189H Brassica oleracea HOM05D005573 ORTHO05D007161 1.9e-86 322.8 204 84.8
Oeu012806.1 Olea europaea HOM05D005573 ORTHO05D007161 2.1e-85 319.3 199 82.9
Lj4g0013543 Lotus japonicus HOM05D005573 ORTHO05D007161 4.7e-85 318.2 202 82.7
PGSC0003DMG400024039 Solanum tuberosum HOM05D005573 ORTHO05D007161 8.0e-85 317.4 182 91.2
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 1.8e-81 306.2 200 79.0
Gohir.D04G083800 Gossypium hirsutum HOM05D005573 ORTHO05D007161 2.4e-81 305.8 202 80.2
Glyma.01G153400 Glycine max HOM05D005573 ORTHO05D007161 3.5e-80 302.0 185 81.6
Zm00001eb039080 Zea mays HOM05D005573 ORTHO05D007161 3.8e-79 298.5 202 75.7
Zm00001eb039210 Zea mays HOM05D005573 ORTHO05D007161 3.8e-79 298.5 202 75.7
Zm00001eb435020 Zea mays HOM05D005573 ORTHO05D007161 3.8e-79 298.5 202 75.7
Zm00001eb435220 Zea mays HOM05D005573 ORTHO05D007161 3.8e-79 298.5 202 75.7
Zm00001eb435420 Zea mays HOM05D005573 ORTHO05D007161 3.8e-79 298.5 202 75.7
Zm00001eb435680 Zea mays HOM05D005573 ORTHO05D007161 3.8e-79 298.5 202 75.7
Zm00001eb440990 Zea mays HOM05D005573 ORTHO05D007161 3.8e-79 298.5 202 75.7
Gohir.D09G179300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.3e-74 280.8 182 81.9
Gorai.006G201300 Gossypium raimondii HOM05D005573 ORTHO05D007161 1.4e-73 280.0 182 81.3
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 2.3e-68 262.7 182 73.6
C09p29560 Brassica napus HOM05D005573 ORTHO05D007161 1.2e-67 260.4 155 87.7
Thhalv10010766m.g Eutrema salsugineum HOM05D005573 ORTHO05D007161 3.7e-66 255.4 202 70.8
Solyc09g015330.2 Solanum lycopersicum HOM05D005573 ORTHO05D007161 8.3e-66 254.2 156 85.9
SEGI_18745 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 1.6e-64 250.0 208 66.3
Nitab4.5_0006596g0030 Nicotiana tabacum HOM05D005573 ORTHO05D007161 4.6e-64 248.4 148 89.2
Zm00001eb039100 Zea mays HOM05D005573 ORTHO05D007161 1.0e-63 247.3 172 74.4
Zm00001eb231240 Zea mays HOM05D005573 ORTHO05D007161 8.6e-63 244.2 177 71.8
Lalb_Chr07g0191491 Lupinus albus HOM05D005573 ORTHO05D007161 1.9e-62 243.0 151 84.1
TWI60G0396 Tripterygium wilfordii HOM05D005573 ORTHO05D007161 2.1e-61 239.6 138 87.0
Gohir.A09G103300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 7.5e-59 231.1 148 83.1
GSVIVG01021975001 Vitis vinifera HOM05D005573 ORTHO05D007161 3.9e-55 218.8 132 86.4
Nn2g13212 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.3e-52 209.5 114 90.4
Nn423s46610 Nelumbo nucifera HOM05D005573 ORTHO05D007161 2.3e-52 209.5 114 90.4
HanXRQChr13g0413641 Helianthus annuus HOM05D005573 ORTHO05D007161 3.1e-52 209.1 114 90.4
HanXRQChr13g0413711 Helianthus annuus HOM05D005573 ORTHO05D007161 3.1e-52 209.1 114 90.4
HanXRQChr13g0413781 Helianthus annuus HOM05D005573 ORTHO05D007161 3.1e-52 209.1 114 90.4
HanXRQChr13g0413861 Helianthus annuus HOM05D005573 ORTHO05D007161 3.1e-52 209.1 114 90.4
HanXRQChr13g0413931 Helianthus annuus HOM05D005573 ORTHO05D007161 3.1e-52 209.1 114 90.4
CAN.G1478.12 Capsicum annuum HOM05D005573 ORTHO05D007161 4.0e-52 208.8 103 99.0
arahy.Tifrunner.gnm1.ann1.NT5R3P Arachis hypogaea HOM05D005573 ORTHO05D007161 4.4e-51 205.3 157 72.6
Nn6g33243 Nelumbo nucifera HOM05D005573 ORTHO05D007161 9.9e-51 204.1 114 87.7
Eucgr.B02956 Eucalyptus grandis HOM05D005573 ORTHO05D007161 1.3e-50 203.8 114 85.1
CDE08G0454 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 1.1e-49 200.7 114 87.7
CAN.G129.6 Capsicum annuum HOM05D005573 ORTHO05D007161 5.4e-49 198.4 103 93.2
CAN.G100.47 Capsicum annuum HOM05D005573 ORTHO05D007161 3.0e-47 192.6 103 91.3
Gohir.A10G100366 Gossypium hirsutum HOM05D005573 ORTHO05D007161 8.6e-47 191.0 114 82.5
Solyc09g015310.3 Solanum lycopersicum HOM05D005573 ORTHO05D007161 5.6e-46 188.3 102 88.2
Potri.013G163300 Populus trichocarpa HOM05D005573 ORTHO05D007161 7.3e-46 188.0 103 88.3
Oeu062838.1 Olea europaea HOM05D005573 ORTHO05D007161 1.2e-45 187.2 129 79.1
Gohir.A07G163636 Gossypium hirsutum HOM05D005573 ORTHO05D007161 6.2e-45 184.9 114 80.7
ClCG00G003940 Citrullus lanatus HOM05D005573 ORTHO05D007161 2.0e-43 179.9 101 93.1
Lalb_Chr15g0080691 Lupinus albus HOM05D005573 ORTHO05D007161 2.0e-43 179.9 103 83.5
Zm00001eb438350 Zea mays HOM05D005573 ORTHO05D007161 1.1e-41 174.1 114 74.6
BraSC25t45875Z Brassica rapa HOM05D005573 ORTHO05D007161 1.0e-39 167.5 103 81.6
Nn5g30925 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.0e-39 167.5 90 90.0
Phvul.011G056580 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 3.9e-39 165.6 101 84.2
Phvul.008G150500 Phaseolus vulgaris HOM05D005573 ORTHO05D007161 5.1e-39 165.2 94 80.9
Migut.D01353 Erythranthe guttata HOM05D005573 ORTHO05D007161 3.4e-35 152.5 142 61.3
SMO086G0035 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 4.9e-34 148.7 190 47.9
SMO086G0038 Selaginella moellendorffii HOM05D005573 ORTHO05D007161 4.9e-34 148.7 190 47.9
CAN.G63.13 Capsicum annuum HOM05D005573 ORTHO05D007161 1.9e-33 146.7 77 92.2
arahy.Tifrunner.gnm1.ann1.NAZW4C Arachis hypogaea HOM05D005573 ORTHO05D007161 2.1e-32 143.3 104 72.1
BolC9t56936H Brassica oleracea HOM05D005573 ORTHO05D007161 2.5e-30 136.3 77 90.9
CAN.G653.3 Capsicum annuum HOM05D005573 ORTHO05D007161 6.2e-29 131.7 65 98.5
TAR625G0941 Trochodendron aralioides HOM05D005573 ORTHO05D007161 6.2e-29 131.7 75 84.0
Zm00001eb434930 Zea mays HOM05D005573 ORTHO05D007161 4.0e-28 129.0 89 70.8
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 1.5e-27 127.1 108 67.6
Oeu056456.1 Olea europaea HOM05D005573 ORTHO05D007161 2.0e-27 126.7 66 90.9
Gohir.A09G045300 Gossypium hirsutum HOM05D005573 ORTHO05D007161 3.4e-27 125.9 73 89.0
Gohir.A09G045446 Gossypium hirsutum HOM05D005573 ORTHO05D007161 4.9e-26 122.1 74 82.4
HanXRQChr00c0345g0573881 Helianthus annuus HOM05D005573 ORTHO05D007161 2.4e-25 119.8 67 88.1
CiPaw.12G056900 Carya illinoinensis HOM05D005573 ORTHO05D007161 3.2e-25 119.4 86 70.9
BolSC47t61119H Brassica oleracea HOM05D005573 ORTHO05D007161 2.7e-24 116.3 64 92.2
Solyc11g022610.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 6.0e-24 115.2 76 85.5
Sc09g0006540 Simmondsia chinensis HOM05D005573 ORTHO05D005696 3.9e-23 112.5 79 77.2
CAN.G331.1 Capsicum annuum HOM05D005573 ORTHO05D007161 6.7e-23 111.7 64 84.4
BolSC29t60458H Brassica oleracea HOM05D005573 ORTHO05D007161 4.3e-22 109.0 67 80.6
BolSC47t61104H Brassica oleracea HOM05D005573 ORTHO05D007161 4.3e-22 109.0 67 80.6
Nn071s42388 Nelumbo nucifera HOM05D005573 ORTHO05D007161 1.6e-21 107.1 90 74.4
TAR375G0006 Trochodendron aralioides HOM05D005573 ORTHO05D007161 2.4e-20 103.2 61 83.6
Mapoly0090s0058 Marchantia polymorpha HOM05D005573 ORTHO05D007161 4.0e-20 102.4 66 72.7
BolC7t41664H Brassica oleracea HOM05D005573 ORTHO05D007161 1.3e-18 97.4 61 77.0
Oeu052069.1 Olea europaea HOM05D005573 ORTHO05D007161 1.7e-18 97.1 109 54.1
MELO3C027485.2 Cucumis melo HOM05D005573 ORTHO05D007161 9.3e-17 91.3 50 88.0
Solyc11g022620.1 Solanum lycopersicum HOM05D005573 ORTHO05D007161 9.3e-17 91.3 55 78.2
MELO3C022836.2 Cucumis melo HOM05D005573 ORTHO05D007161 3.5e-16 89.4 49 87.8
Nn055s41940 Nelumbo nucifera HOM05D005573 ORTHO05D007161 6.0e-16 88.6 45 91.1
Nitab4.5_0000261g0250 Nicotiana tabacum HOM05D005573 ORTHO05D007161 7.9e-16 88.2 42 95.2
Oeu042745.1 Olea europaea HOM05D005573 ORTHO05D007161 1.3e-15 87.4 104 52.9
HanXRQChr13g0413681 Helianthus annuus HOM05D005573 ORTHO05D029920 8.7e-15 84.7 45 86.7
HanXRQChr13g0413751 Helianthus annuus HOM05D005573 ORTHO05D029920 8.7e-15 84.7 45 86.7
HanXRQChr13g0413831 Helianthus annuus HOM05D005573 ORTHO05D029920 8.7e-15 84.7 45 86.7
HanXRQChr13g0413901 Helianthus annuus HOM05D005573 ORTHO05D029920 8.7e-15 84.7 45 86.7
Nn021s41552 Nelumbo nucifera HOM05D005573 ORTHO05D007161 7.4e-14 81.6 41 95.1
BraSC25t45840Z Brassica rapa HOM05D005573 ORTHO05D007161 3.7e-13 79.3 52 82.7
ClCG11G007200 Citrullus lanatus HOM05D005573 ORTHO05D007161 4.1e-12 75.9 52 69.2
Oeu041772.1 Olea europaea HOM05D005573 ORTHO05D007161 4.1e-12 75.9 58 70.7
Nn055s41939 Nelumbo nucifera HOM05D005573 ORTHO05D007161 6.9e-12 75.1 37 94.6
BolSC29t60581H Brassica oleracea HOM05D005573 ORTHO05D007161 7.1e-09 65.1 36 91.7
BolC9t55817H Brassica oleracea HOM05D005573 ORTHO05D007161 4.6e-08 62.4 48 70.8
Glyma.18G203700 Glycine max HOM05D005573 ORTHO05D007161 4.6e-08 62.4 40 75.0


User provided reference genes

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