Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.5e-67 259.2 121 100.0
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.1e-56 222.2 116 85.3
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.8e-55 219.2 115 86.1
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 3.0e-55 218.4 115 86.1
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.1e-49 199.9 116 80.2
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 4.8e-45 184.5 113 76.1
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.4e-44 183.0 111 67.6
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.1e-44 181.4 111 66.7
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 5.4e-44 181.0 110 69.1
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 2.7e-43 178.7 109 67.9
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 3.5e-43 178.3 108 65.7
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 4.5e-43 177.9 104 69.2
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 7.7e-43 177.2 110 66.4
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 1.0e-42 176.8 110 67.3
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.9e-42 175.3 104 68.3
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 2.9e-42 175.3 117 65.8
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.8e-42 174.9 100 71.0
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 3.8e-42 174.9 100 71.0
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 5.0e-42 174.5 110 62.7
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 2.5e-41 172.2 99 69.7
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 2.5e-41 172.2 115 63.5
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 4.2e-41 171.4 109 63.3
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 5.5e-41 171.0 115 60.9
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 5.5e-41 171.0 103 68.0
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 7.2e-41 170.6 104 65.4
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 9.5e-41 170.2 110 63.6
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 1.2e-40 169.9 104 64.4
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.6e-40 169.5 110 64.5
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.6e-40 169.5 112 64.3
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 2.1e-40 169.1 103 68.0
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 2.1e-40 169.1 113 60.2
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 2.8e-40 168.7 111 62.2
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 3.6e-40 168.3 111 63.1
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.7e-40 167.9 110 63.6
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 4.7e-40 167.9 102 64.7
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 6.1e-40 167.5 114 61.4
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 6.1e-40 167.5 113 61.9
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 8.0e-40 167.2 112 62.5
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 8.0e-40 167.2 110 63.6
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 1.0e-39 166.8 107 63.6
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 1.0e-39 166.8 107 63.6
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 1.4e-39 166.4 108 63.9
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 1.4e-39 166.4 110 62.7
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 2.3e-39 165.6 96 66.7
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 2.3e-39 165.6 114 60.5
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.3e-39 165.6 115 62.6
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 2.3e-39 165.6 99 66.7
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 3.0e-39 165.2 151 51.0
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 3.0e-39 165.2 111 63.1
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 4.0e-39 164.9 125 56.0
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 4.0e-39 164.9 125 56.0
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 4.0e-39 164.9 125 56.0
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 4.0e-39 164.9 125 56.0
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 4.0e-39 164.9 125 56.0
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 4.0e-39 164.9 110 60.0
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 4.0e-39 164.9 110 60.0
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 5.2e-39 164.5 107 61.7
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 5.2e-39 164.5 109 63.3
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 6.8e-39 164.1 96 66.7
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 6.8e-39 164.1 109 61.5
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 6.8e-39 164.1 125 55.2
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 8.8e-39 163.7 99 64.6
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 8.8e-39 163.7 99 64.6
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 8.8e-39 163.7 108 63.0
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.5e-38 162.9 108 61.1
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 2.0e-38 162.5 95 68.4
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 2.6e-38 162.2 103 63.1
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 3.4e-38 161.8 102 64.7
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 4.4e-38 161.4 124 54.0
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 4.4e-38 161.4 124 54.0
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.4e-38 161.4 118 60.2
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 4.4e-38 161.4 118 58.5
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 4.4e-38 161.4 118 58.5
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 5.7e-38 161.0 95 65.3
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 9.8e-38 160.2 105 62.9
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 9.8e-38 160.2 142 51.4
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 1.3e-37 159.8 117 53.8
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 2.2e-37 159.1 113 61.1
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 8.3e-37 157.1 99 62.6
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 8.3e-37 157.1 108 57.4
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.1e-36 156.8 126 55.6
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 1.8e-36 156.0 121 53.7
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 7.0e-36 154.1 99 60.6
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 7.0e-36 154.1 113 60.2
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 7.0e-36 154.1 104 58.7
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 1.2e-35 153.3 108 57.4
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 2.7e-35 152.1 99 59.6
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 3.5e-35 151.8 124 52.4
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 4.5e-35 151.4 107 54.2
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 7.8e-35 150.6 100 61.0
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 2.3e-34 149.1 104 63.5
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 2.9e-34 148.7 96 66.7
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 5.0e-34 147.9 126 50.8
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 6.6e-34 147.5 83 68.7
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 8.6e-34 147.1 118 52.5
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 1.9e-33 146.0 111 58.6
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 2.5e-33 145.6 88 70.5
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 6.1e-32 141.0 150 46.0
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 8.0e-32 140.6 141 48.2
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 8.9e-31 137.1 90 65.6
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.2e-30 136.7 113 54.9
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 7.5e-30 134.0 118 53.4
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 4.9e-29 131.3 72 72.2
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 1.4e-28 129.8 72 70.8
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 7.0e-28 127.5 92 58.7
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 7.3e-25 117.5 117 48.7
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 2.8e-24 115.5 84 59.5
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.2e-22 110.2 59 84.7
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.9e-21 105.5 76 61.8
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.9e-21 105.5 76 61.8
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 6.4e-21 104.4 89 57.3
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 2.4e-20 102.4 75 58.7
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 7.0e-20 100.9 78 57.7
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.6e-19 99.8 82 54.9
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.5e-19 98.6 75 54.7
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 1.0e-18 97.1 113 38.9
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 3.9e-18 95.1 72 58.3
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 5.0e-18 94.7 74 56.8
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 5.8e-14 81.3 66 48.5
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 1.9e-09 66.2 35 74.3


User provided reference genes

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