Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1160.9 Capsicum annuum HOM05D000853 ORTHO05D000723 1.2e-56 223.0 121 100.0
CAN.G551.42 Capsicum annuum HOM05D000853 ORTHO05D000723 2.7e-51 205.3 120 91.7
Peaxi162Scf00062g00222 Petunia axillaris HOM05D000853 ORTHO05D000723 5.5e-49 197.6 120 88.3
PGSC0003DMG400007902 Solanum tuberosum HOM05D000853 ORTHO05D000723 2.1e-48 195.7 120 88.3
Solyc12g010050.2 Solanum lycopersicum HOM05D000853 ORTHO05D000723 3.6e-48 194.9 120 86.7
Sopen12g004930 Solanum pennellii HOM05D000853 ORTHO05D000723 3.6e-48 194.9 120 86.7
Nitab4.5_0002891g0010 Nicotiana tabacum HOM05D000853 ORTHO05D000723 1.8e-47 192.6 120 87.5
Nitab4.5_0002315g0170 Nicotiana tabacum HOM05D000853 ORTHO05D000723 3.5e-43 178.3 120 84.2
Peaxi162Scf00401g00823 Petunia axillaris HOM05D000853 ORTHO05D000723 5.4e-28 127.9 121 64.5
Dinv41381 Davidia involucrata HOM05D000853 ORTHO05D000723 1.6e-24 116.3 130 58.5
QL02p093205 Quercus lobata HOM05D000853 ORTHO05D000723 4.7e-24 114.8 128 58.6
COL.COLO4_18807 Corchorus olitorius HOM05D000853 ORTHO05D000723 6.2e-24 114.4 128 58.6
GSVIVG01023602001 Vitis vinifera HOM05D000853 ORTHO05D000723 6.2e-24 114.4 124 58.1
Nn2g12374 Nelumbo nucifera HOM05D000853 ORTHO05D000723 1.0e-23 113.6 124 59.7
Duzib168G1773 Durio zibethinus HOM05D000853 ORTHO05D000723 1.4e-23 113.2 128 57.0
Thecc.09G031000 Theobroma cacao HOM05D000853 ORTHO05D000723 1.8e-23 112.8 128 57.0
Nn8g39889 Nelumbo nucifera HOM05D000853 ORTHO05D000723 8.9e-23 110.5 124 58.1
TAR626G0040 Trochodendron aralioides HOM05D000853 ORTHO05D000723 8.9e-23 110.5 125 59.2
Duzib187G0610 Durio zibethinus HOM05D000853 ORTHO05D000723 1.2e-22 110.2 121 57.0
Gohir.D13G190200 Gossypium hirsutum HOM05D000853 ORTHO05D000723 1.5e-22 109.8 128 56.2
Gorai.013G216100 Gossypium raimondii HOM05D000853 ORTHO05D000723 1.5e-22 109.8 128 56.2
TWI34G1840 Tripterygium wilfordii HOM05D000853 ORTHO05D000723 2.0e-22 109.4 124 58.9
Gohir.A13G184100 Gossypium hirsutum HOM05D000853 ORTHO05D000723 5.8e-22 107.8 128 55.5
RcHm_v2.0_Chr2g0085681 Rosa chinensis HOM05D000853 ORTHO05D000723 5.8e-22 107.8 125 57.6
TWI63G0458 Tripterygium wilfordii HOM05D000853 ORTHO05D000723 5.8e-22 107.8 124 57.3
CSS0035591 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 2.2e-21 105.9 130 53.8
Cc06_g15000 Coffea canephora HOM05D000853 ORTHO05D000723 2.2e-21 105.9 129 57.4
Atru.chr7.52 Acer truncatum HOM05D000853 ORTHO05D000723 2.9e-21 105.5 130 56.2
Duzib150G0545 Durio zibethinus HOM05D000853 ORTHO05D000723 2.9e-21 105.5 128 54.7
Potri.018G106900 Populus trichocarpa HOM05D000853 ORTHO05D000723 2.9e-21 105.5 128 55.5
PGR102G3038 Punica granatum HOM05D000853 ORTHO05D000723 2.9e-21 105.5 124 58.1
FvH4_1g00950 Fragaria vesca HOM05D000853 ORTHO05D000723 3.7e-21 105.1 127 55.9
FAN23G0788 Fragaria x ananassa HOM05D000853 ORTHO05D000723 3.7e-21 105.1 127 55.9
FAN26G3002 Fragaria x ananassa HOM05D000853 ORTHO05D000723 3.7e-21 105.1 127 55.9
FAN28G2894 Fragaria x ananassa HOM05D000853 ORTHO05D000723 3.7e-21 105.1 127 55.9
Potri.006G184700 Populus trichocarpa HOM05D000853 ORTHO05D000723 3.7e-21 105.1 129 55.0
CANSAT11G1681 Cannabis sativa HOM05D000853 ORTHO05D000723 4.9e-21 104.8 130 56.2
Gorai.009G057100 Gossypium raimondii HOM05D000853 ORTHO05D000723 6.4e-21 104.4 128 55.5
Rhsim01G0033500 Rhododendron simsii HOM05D000853 ORTHO05D000723 6.4e-21 104.4 128 52.3
Haze_19207 Corylus avellana HOM05D000853 ORTHO05D000723 8.3e-21 104.0 130 56.2
MD02G1007800 Malus domestica HOM05D000853 ORTHO05D000723 8.3e-21 104.0 127 54.3
Cfa020827 Carpinus fangiana HOM05D000853 ORTHO05D000723 1.1e-20 103.6 130 56.2
Gohir.D05G056100 Gossypium hirsutum HOM05D000853 ORTHO05D000723 1.1e-20 103.6 128 55.5
TAR383G1007 Trochodendron aralioides HOM05D000853 ORTHO05D000723 1.1e-20 103.6 125 56.8
TAR636G2904 Trochodendron aralioides HOM05D000853 ORTHO05D000723 1.4e-20 103.2 123 57.7
arahy.Tifrunner.gnm1.ann1.ENQE7H Arachis hypogaea HOM05D000853 ORTHO05D000723 1.9e-20 102.8 130 54.6
arahy.Tifrunner.gnm1.ann1.GMHM2X Arachis hypogaea HOM05D000853 ORTHO05D000723 1.9e-20 102.8 130 54.6
Sabra18G0091100 Salix brachista HOM05D000853 ORTHO05D000723 1.9e-20 102.8 128 51.6
Gorai.010G113100 Gossypium raimondii HOM05D000853 ORTHO05D000723 2.4e-20 102.4 124 57.3
Lj9C717T1 Lonicera japonica HOM05D000853 ORTHO05D000723 2.4e-20 102.4 114 57.0
CiPaw.16G111200 Carya illinoinensis HOM05D000853 ORTHO05D000723 4.1e-20 101.7 129 55.8
Gohir.A05G054900 Gossypium hirsutum HOM05D000853 ORTHO05D000723 4.1e-20 101.7 128 54.7
Eucgr.C00347 Eucalyptus grandis HOM05D000853 ORTHO05D000723 5.4e-20 101.3 128 55.5
Nitab4.5_0005653g0050 Nicotiana tabacum HOM05D000853 ORTHO05D000723 9.2e-20 100.5 101 62.4
Lj6g0017650 Lotus japonicus HOM05D000853 ORTHO05D000723 1.2e-19 100.1 131 51.9
Sabra06G0140300 Salix brachista HOM05D000853 ORTHO05D000723 1.2e-19 100.1 129 53.5
Cpa.g.sc46.153 Carica papaya HOM05D000853 ORTHO05D000723 1.6e-19 99.8 128 55.5
Gohir.A06G097500 Gossypium hirsutum HOM05D000853 ORTHO05D000723 2.0e-19 99.4 125 56.0
Ciclev10008612m.g Citrus clementina HOM05D000853 ORTHO05D000723 2.7e-19 99.0 134 53.0
Nitab4.5_0001571g0030 Nicotiana tabacum HOM05D000853 ORTHO05D000723 3.5e-19 98.6 125 54.4
TAR625G1502 Trochodendron aralioides HOM05D000853 ORTHO05D000723 3.5e-19 98.6 125 56.8
Medtr4g130880 Medicago truncatula HOM05D000853 ORTHO05D000723 4.6e-19 98.2 120 55.0
Glyma.06G219600 Glycine max HOM05D000853 ORTHO05D000723 6.0e-19 97.8 131 52.7
Prupe.7G262700 Prunus persica HOM05D000853 ORTHO05D000723 6.0e-19 97.8 127 53.5
Actinidia38323 Actinidia chinensis HOM05D000853 ORTHO05D000723 2.3e-18 95.9 129 51.9
Hma1.2p1_0222F.1_g093540 Hydrangea macrophylla HOM05D000853 ORTHO05D000723 3.0e-18 95.5 129 49.6
TPR.G24872 Trifolium pratense HOM05D000853 ORTHO05D000723 3.0e-18 95.5 120 55.0
Dinv42857 Davidia involucrata HOM05D000853 ORTHO05D000723 3.9e-18 95.1 121 53.7
Dinv43243 Davidia involucrata HOM05D000853 ORTHO05D000723 3.9e-18 95.1 121 53.7
CiPaw.15G169000 Carya illinoinensis HOM05D000853 ORTHO05D000723 5.0e-18 94.7 129 52.7
Ca_21126_v3 Cicer arietinum L. HOM05D000853 ORTHO05D000723 1.9e-17 92.8 128 53.1
Actinidia04299 Actinidia chinensis HOM05D000853 ORTHO05D000723 4.3e-17 91.7 129 50.4
Psat4g109200 Pisum sativum HOM05D000853 ORTHO05D000723 4.3e-17 91.7 120 52.5
ClCG09G003330 Citrullus lanatus HOM05D000853 ORTHO05D000723 1.2e-16 90.1 122 50.0
MELO3C023466.2 Cucumis melo HOM05D000853 ORTHO05D000723 1.2e-16 90.1 122 50.0
CsaV3_7G031900 Cucumis sativus L. HOM05D000853 ORTHO05D000723 1.2e-16 90.1 122 50.0
Dinv23285 Davidia involucrata HOM05D000853 ORTHO05D000723 3.6e-16 88.6 130 52.3
TWI32G0435 Tripterygium wilfordii HOM05D000853 ORTHO05D000723 8.1e-16 87.4 124 52.4
Lsat_1_v5_gn_7_49801 Lactuca sativa HOM05D000853 ORTHO05D000723 1.1e-15 87.0 123 49.6
Lj5C80T14 Lonicera japonica HOM05D000853 ORTHO05D000723 1.1e-15 87.0 137 49.6
HPP92_010340 Vanilla planifolia HOM05D000853 ORTHO05D000723 1.4e-15 86.7 127 53.5
Sed0005397 Sechium edule HOM05D000853 ORTHO05D000723 2.3e-15 85.9 122 47.5
Sed0018153 Sechium edule HOM05D000853 ORTHO05D000723 5.2e-15 84.7 125 47.2
Lalb_Chr07g0179861 Lupinus albus HOM05D000853 ORTHO05D000723 8.9e-15 84.0 132 46.2
Oeu027649.1 Olea europaea HOM05D000853 ORTHO05D000723 8.9e-15 84.0 130 50.8
ATR0739G120 Amborella trichopoda HOM05D000853 ORTHO05D000723 1.2e-14 83.6 133 48.9
ECA240G3966 Erigeron canadensis HOM05D000853 ORTHO05D000723 2.0e-14 82.8 122 47.5
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 4.4e-14 81.6 128 46.1
AUR62026997 Chenopodium quinoa HOM05D000853 ORTHO05D000723 4.4e-14 81.6 128 47.7
THA.LOC104811835 Tarenaya hassleriana HOM05D000853 ORTHO05D000723 4.4e-14 81.6 132 46.2
Glyma.17G073900 Glycine max HOM05D000853 ORTHO05D000723 5.8e-14 81.3 124 51.6
Hund06520 Selenicereus undatus HOM05D000853 ORTHO05D000723 7.5e-14 80.9 127 47.2
Nitab4.5_0012161g0010 Nicotiana tabacum HOM05D000853 ORTHO05D000723 2.2e-13 79.3 137 47.4
Glyma.02G203900 Glycine max HOM05D000853 ORTHO05D000723 2.9e-13 79.0 124 48.4
CSS0034656 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 3.7e-13 78.6 127 44.9
MBI15_g19324_MAGBIO Magnolia biondii HOM05D000853 ORTHO05D000723 6.4e-13 77.8 131 47.3
Nitab4.5_0002568g0040 Nicotiana tabacum HOM05D000853 ORTHO05D000723 6.4e-13 77.8 137 47.4
Hma1.2p1_0135F.1_g061940 Hydrangea macrophylla HOM05D000853 ORTHO05D000723 8.3e-13 77.4 109 52.3
Phvul.003G156200 Phaseolus vulgaris HOM05D000853 ORTHO05D000723 1.1e-12 77.0 115 51.3
HanXRQChr03g0064911 Helianthus annuus HOM05D000853 ORTHO05D000723 1.4e-12 76.6 122 45.1
VMungo1215G1256 Vigna mungo HOM05D000853 ORTHO05D000723 1.4e-12 76.6 124 50.8
Actinidia36876 Actinidia chinensis HOM05D000853 ORTHO05D000723 1.6e-11 73.2 131 46.6
Lalb_Chr12g0198681 Lupinus albus HOM05D000853 ORTHO05D000723 2.1e-11 72.8 132 43.2
MSTRG.22799 Avicennia marina HOM05D000853 ORTHO05D000723 2.7e-11 72.4 137 44.5
CDE05G2821 Ceratophyllum demersum HOM05D000853 ORTHO05D000723 3.5e-11 72.0 111 45.9
AUR62030837 Chenopodium quinoa HOM05D000853 ORTHO05D000723 4.6e-11 71.6 111 46.8
Sc10g0008420 Simmondsia chinensis HOM05D000853 ORTHO05D000723 1.0e-10 70.5 124 47.6
AT5G57970 Arabidopsis thaliana HOM05D000853 ORTHO05D000723 1.3e-10 70.1 130 44.6
Sopen03g035810 Solanum pennellii HOM05D000853 ORTHO05D000723 1.3e-10 70.1 131 45.8
HanXRQChr08g0235861 Helianthus annuus HOM05D000853 ORTHO05D000723 1.7e-10 69.7 118 46.6
Solyc03g116880.3 Solanum lycopersicum HOM05D000853 ORTHO05D000723 1.7e-10 69.7 131 45.8
Oeu027825.1 Olea europaea HOM05D000853 ORTHO05D000723 3.0e-10 68.9 131 44.3
Peaxi162Scf00332g00543 Petunia axillaris HOM05D000853 ORTHO05D000723 3.0e-10 68.9 138 43.5
PGSC0003DMG400019819 Solanum tuberosum HOM05D000853 ORTHO05D000723 3.0e-10 68.9 136 44.9
Actinidia08944 Actinidia chinensis HOM05D000853 ORTHO05D000723 3.9e-10 68.6 108 47.2
Cc04_g05090 Coffea canephora HOM05D000853 ORTHO05D000723 3.9e-10 68.6 144 41.7
Carub.0008s1850 Capsella rubella HOM05D000853 ORTHO05D000723 5.1e-10 68.2 131 43.5
Migut.D01125 Erythranthe guttata HOM05D000853 ORTHO05D000723 5.1e-10 68.2 132 41.7
Ah.01g006940 Amaranthus hybridus HOM05D000853 ORTHO05D000723 8.6e-10 67.4 126 44.4
Oeu060129.1 Olea europaea HOM05D000853 ORTHO05D000723 1.1e-09 67.0 126 42.9
Hund00434 Selenicereus undatus HOM05D000853 ORTHO05D000723 1.1e-09 67.0 126 42.9
AL8G34050 Arabidopsis lyrata HOM05D000853 ORTHO05D000723 3.3e-09 65.5 130 39.2
DCAR_021368 Daucus carota HOM05D000853 ORTHO05D000723 3.3e-09 65.5 111 48.6
ECA246G1998 Erigeron canadensis HOM05D003659 ORTHO05D004298 7.3e-09 64.3 113 43.4
DCAR_032349 Daucus carota HOM05D000853 ORTHO05D000723 9.5e-09 63.9 119 46.2
Oeu028338.1 Olea europaea HOM05D000853 ORTHO05D000723 9.5e-09 63.9 124 44.4
MSTRG.11180 Avicennia marina HOM05D000853 ORTHO05D000723 1.2e-08 63.5 130 40.8
DCAR_016303 Daucus carota HOM05D000853 ORTHO05D000723 1.6e-08 63.2 118 44.9
HPP92_015873 Vanilla planifolia HOM05D000853 ORTHO05D000723 2.1e-08 62.8 123 41.5
PGR102G1482 Punica granatum HOM05D000853 ORTHO05D000723 2.8e-08 62.4 128 41.4
CAN.G407.65 Capsicum annuum HOM05D000853 ORTHO05D000723 4.7e-08 61.6 135 42.2
Lsat_1_v5_gn_5_8221 Lactuca sativa HOM05D000853 ORTHO05D000723 6.2e-08 61.2 121 43.0
vmacro19056 Vaccinium macrocarpon HOM05D000853 ORTHO05D000723 6.2e-08 61.2 103 44.7
Thecc.06G041400 Theobroma cacao HOM05D000853 ORTHO05D000723 1.4e-07 60.1 106 43.4
CiPaw.02G162200 Carya illinoinensis HOM05D000853 ORTHO05D000723 1.8e-07 59.7 113 37.2
Rhsim08G0205800 Rhododendron simsii HOM05D000853 ORTHO05D000723 1.8e-07 59.7 109 41.3
HanXRQChr05g0153771 Helianthus annuus HOM05D000853 ORTHO05D000723 3.1e-07 58.9 119 42.0
MSTRG.19647 Avicennia marina HOM05D000853 ORTHO05D000723 4.0e-07 58.5 100 49.0
CARHR271750 Cardamine hirsuta HOM05D000853 ORTHO05D000723 5.2e-07 58.2 131 39.7
arahy.Tifrunner.gnm1.ann1.GX19PR Arachis hypogaea HOM05D000853 ORTHO05D000723 8.9e-07 57.4 103 46.6
Migut.I00694 Erythranthe guttata HOM05D000853 ORTHO05D000723 8.9e-07 57.4 123 42.3
unitig_747.g21307 Utricularia gibba HOM05D000853 ORTHO05D000723 1.2e-06 57.0 130 40.8
Gohir.A05G119400 Gossypium hirsutum HOM05D000853 ORTHO05D000723 2.6e-06 55.8 99 44.4
SGA_v2.0_scaffold37G14701 Striga asiatica HOM05D000853 ORTHO05D000723 3.4e-06 55.5 123 40.7
SGA_v2.0_scaffold26G11299 Striga asiatica HOM05D000853 ORTHO05D000723 4.4e-06 55.1 121 38.8
THA.LOC104808178 Tarenaya hassleriana HOM05D000853 ORTHO05D000723 7.6e-06 54.3 111 40.5


User provided reference genes

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