Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1126.38 Capsicum annuum HOM05D000179 ORTHO05D000107 7.3e-62 240.4 118 100.0
Solyc04g080130.3 Solanum lycopersicum HOM05D000179 ORTHO05D000107 2.4e-41 172.2 119 79.0
Sopen04g033710 Solanum pennellii HOM05D000179 ORTHO05D000107 9.2e-41 170.2 119 78.2
PGSC0003DMG400005147 Solanum tuberosum HOM05D000179 ORTHO05D000107 4.6e-40 167.9 119 76.5
Peaxi162Scf00690g00006 Petunia axillaris HOM05D000179 ORTHO05D000107 2.1e-29 132.5 105 69.5
Nitab4.5_0003246g0020 Nicotiana tabacum HOM05D000179 ORTHO05D000107 2.6e-27 125.6 118 61.0
Nitab4.5_0000110g0440 Nicotiana tabacum HOM05D000179 ORTHO05D000107 3.8e-26 121.7 118 60.2
Oeu005364.1 Olea europaea HOM05D000179 ORTHO05D000107 1.9e-14 82.8 96 50.0
Dinv39398 Davidia involucrata HOM05D000179 ORTHO05D000107 4.0e-12 75.1 128 42.2
Oeu016742.1 Olea europaea HOM05D000179 ORTHO05D000107 9.0e-12 73.9 106 45.3
PGR031G0797 Punica granatum HOM05D000179 ORTHO05D000107 5.8e-11 71.2 133 36.8
Cc10_g03110 Coffea canephora HOM05D000179 ORTHO05D000107 7.6e-11 70.9 115 44.3
Dinv36059 Davidia involucrata HOM05D000179 ORTHO05D000107 1.7e-10 69.7 123 39.8
Rhsim07G0237000 Rhododendron simsii HOM05D000179 ORTHO05D000107 1.1e-09 67.0 108 42.6
Thecc.08G023800 Theobroma cacao HOM05D000179 ORTHO05D000107 1.1e-09 67.0 93 46.2
TAR628G1505 Trochodendron aralioides HOM05D000179 ORTHO05D000107 1.4e-09 66.6 78 50.0
SGA_v2.0_scaffold48G18068 Striga asiatica HOM05D000179 ORTHO05D000107 1.9e-09 66.2 85 52.9
MSTRG.24296 Avicennia marina HOM05D000179 ORTHO05D000107 3.2e-09 65.5 100 46.0
Duzib041G0079 Durio zibethinus HOM05D000179 ORTHO05D000107 3.2e-09 65.5 106 42.5
Cpa.g.sc64.66 Carica papaya HOM05D000179 ORTHO05D000107 4.2e-09 65.1 96 42.7
Gohir.A05G195500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 7.1e-09 64.3 108 40.7
Haze_15117 Corylus avellana HOM05D000179 ORTHO05D000107 9.3e-09 63.9 82 53.7
Nn1g05075 Nelumbo nucifera HOM05D000179 ORTHO05D000107 1.6e-08 63.2 103 37.9
DCAR_012746 Daucus carota HOM05D000179 ORTHO05D000107 2.1e-08 62.8 132 38.6
Thecc.01G039200 Theobroma cacao HOM05D000179 ORTHO05D000107 2.1e-08 62.8 81 48.1
Ciclev10001017m.g Citrus clementina HOM05D000179 ORTHO05D000107 3.5e-08 62.0 83 44.6
Hma1.2p1_0023F.1_g014920 Hydrangea macrophylla HOM05D000179 ORTHO05D000107 3.5e-08 62.0 98 42.9
Aqoxy5G01679 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 4.6e-08 61.6 99 42.4
DCAR_008768 Daucus carota HOM05D000179 ORTHO05D000107 4.6e-08 61.6 91 45.1
Eucgr.I02463 Eucalyptus grandis HOM05D000179 ORTHO05D000107 4.6e-08 61.6 97 43.3
Zm00001eb107730 Zea mays HOM05D000179 ORTHO05D000107 6.0e-08 61.2 76 50.0
Actinidia29831 Actinidia chinensis HOM05D000179 ORTHO05D000107 7.9e-08 60.8 106 40.6
Actinidia38016 Actinidia chinensis HOM05D000179 ORTHO05D000107 7.9e-08 60.8 106 39.6
Lj4C784T4 Lonicera japonica HOM05D000179 ORTHO05D000107 7.9e-08 60.8 122 41.8
CiPaw.02G015500 Carya illinoinensis HOM05D000179 ORTHO05D000107 1.0e-07 60.5 82 50.0
COL.COLO4_22112 Corchorus olitorius HOM05D000179 ORTHO05D000107 1.0e-07 60.5 101 41.6
Gohir.D05G198700 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.0e-07 60.5 108 39.8
Duzib147G1634 Durio zibethinus HOM05D000179 ORTHO05D000107 1.3e-07 60.1 80 43.8
Phvul.003G252400 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 1.3e-07 60.1 101 43.6
Hund16581 Selenicereus undatus HOM05D000179 ORTHO05D000107 1.3e-07 60.1 75 46.7
Gohir.D03G016100 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.3e-07 59.3 97 40.2
Potri.007G028800 Populus trichocarpa HOM05D000179 ORTHO05D000107 2.3e-07 59.3 82 48.8
Gorai.009G203800 Gossypium raimondii HOM05D000179 ORTHO05D000107 3.0e-07 58.9 77 49.4
SGA_v2.0_scaffold189G40349 Striga asiatica HOM05D000179 ORTHO05D000107 3.9e-07 58.5 110 43.6
Sabra07G0024900 Salix brachista HOM05D000179 ORTHO05D000107 5.1e-07 58.2 82 47.6
CSS0027968 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 6.7e-07 57.8 132 34.8
CSS0033024 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 6.7e-07 57.8 132 34.8
Glyma.01G176600 Glycine max HOM05D000179 ORTHO05D000107 6.7e-07 57.8 78 47.4
SalBow8G0746 Salvia bowleyana HOM05D000179 ORTHO05D000107 6.7e-07 57.8 127 38.6
Gohir.D11G192300 Gossypium hirsutum HOM05D000179 ORTHO05D000107 8.7e-07 57.4 101 41.6
Gorai.003G016300 Gossypium raimondii HOM05D000179 ORTHO05D000107 8.7e-07 57.4 97 39.2
Duzib116G0505 Durio zibethinus HOM05D000179 ORTHO05D000107 1.1e-06 57.0 98 43.9
TWI53G1172 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 1.5e-06 56.6 81 43.2
Duzib093G2099 Durio zibethinus HOM05D000179 ORTHO05D000107 1.9e-06 56.2 108 39.8
Gohir.D03G016000 Gossypium hirsutum HOM05D000179 ORTHO05D000107 1.9e-06 56.2 97 39.2
Gorai.003G016200 Gossypium raimondii HOM05D000179 ORTHO05D000107 1.9e-06 56.2 97 39.2
Lj4g0021995 Lotus japonicus HOM05D000179 ORTHO05D000107 1.9e-06 56.2 99 41.4
PGSC0003DMG400012684 Solanum tuberosum HOM05D000179 ORTHO05D000107 1.9e-06 56.2 79 45.6
CANSAT01G1456 Cannabis sativa HOM05D000179 ORTHO05D000107 2.5e-06 55.8 82 46.3
AUR62003180 Chenopodium quinoa HOM05D000179 ORTHO05D000107 2.5e-06 55.8 101 41.6
AUR62008000 Chenopodium quinoa HOM05D000179 ORTHO05D000107 2.5e-06 55.8 101 41.6
Gorai.007G205300 Gossypium raimondii HOM05D000179 ORTHO05D000107 2.5e-06 55.8 101 40.6
SalBow8G5569 Salvia bowleyana HOM05D000179 ORTHO05D000107 2.5e-06 55.8 127 37.0
Ah.02g126410 Amaranthus hybridus HOM05D000179 ORTHO05D000107 3.3e-06 55.5 78 44.9
Duzib187G1292 Durio zibethinus HOM05D000179 ORTHO05D000107 3.3e-06 55.5 98 40.8
QL06p045424 Quercus lobata HOM05D000179 ORTHO05D000107 3.3e-06 55.5 82 46.3
TWI73G0589 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 3.3e-06 55.5 101 40.6
CiPaw.01G035000 Carya illinoinensis HOM05D000179 ORTHO05D000107 4.3e-06 55.1 82 47.6
Phvul.002G028100 Phaseolus vulgaris HOM05D000179 ORTHO05D000107 4.3e-06 55.1 101 42.6
VMungo1215G0657 Vigna mungo HOM05D000179 ORTHO05D000107 4.3e-06 55.1 101 42.6
VMungo0251G2832 Vigna mungo HOM05D000179 ORTHO05D000107 5.6e-06 54.7 101 41.6
Cc07_g09220 Coffea canephora HOM05D000179 ORTHO05D000107 7.4e-06 54.3 78 43.6
TAR381G1648 Trochodendron aralioides HOM05D000179 ORTHO05D000107 7.4e-06 54.3 76 42.1
CAN.G358.122 Capsicum annuum HOM05D000179 ORTHO05D000107 9.6e-06 53.9 79 43.0
Gohir.A02G164200 Gossypium hirsutum HOM05D000179 ORTHO05D000107 9.6e-06 53.9 97 38.1
Manes.12G089978 Manihot esculenta HOM05D000179 ORTHO05D000107 9.6e-06 53.9 81 44.4
Solyc02g085580.4 Solanum lycopersicum HOM05D000179 ORTHO05D000107 9.6e-06 53.9 76 46.1


User provided reference genes

Program Settings