Gene: Sopen04g033710
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g033710
- Transcript Identifier Sopen04g033710.1
- Gene Type Coding gene
- Location Spenn-ch04 : 74951941-74954379 : negative
Gene Family Information
- ID HOM05D000179
- #Genes/#Species 2119/97
- Phylogenetic origin
- ID ORTHO05D000107
- #Genes/#Species 2044/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen04g033710.1
Descriptions
- Description MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. | Magpie (MGP) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | Os10g0419200 |
| GO:0048510 | ISO | PLAZA Integrative Orthology | regulation of timing of transition from vegetative to reproductive phase | Os10g0419200 |
| GO:0048575 | ISO | PLAZA Integrative Orthology | short-day photoperiodism, flowering | Os10g0419200 |
| GO:0048574 | ISO | PLAZA Integrative Orthology | long-day photoperiodism, flowering | Os10g0419200 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | Os10g0419200 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | Os10g0419200 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Os10g0419200 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.15 | RNA biosynthesis.transcriptional regulation.transcription factor (C2H2-ZF) |