Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1111.1 Capsicum annuum HOM05D001273 ORTHO05D000023 3.9e-148 528.1 263 100.0
CAN.G1812.8 Capsicum annuum HOM05D001273 ORTHO05D000023 3.3e-99 365.5 321 63.9
PGSC0003DMG400027434 Solanum tuberosum HOM05D001273 ORTHO05D000023 2.6e-83 312.8 322 58.7
Solyc05g018240.4 Solanum lycopersicum HOM05D001273 ORTHO05D000023 8.2e-82 307.8 322 58.1
Sopen05g015000 Solanum pennellii HOM05D001273 ORTHO05D000023 1.8e-68 263.5 322 52.2
Peaxi162Scf00539g00006 Petunia axillaris HOM05D001273 ORTHO05D000023 5.2e-68 261.9 321 51.1
Nitab4.5_0000012g0190 Nicotiana tabacum HOM05D001273 ORTHO05D000023 1.4e-57 227.3 331 48.9
Nitab4.5_0000066g0210 Nicotiana tabacum HOM05D001273 ORTHO05D000023 1.6e-56 223.8 330 47.3
Oeu053754.1 Olea europaea HOM05D001273 ORTHO05D000023 3.5e-16 89.7 317 27.1
CSS0003269 Camellia sinensis var. sinensis HOM05D001273 ORTHO05D000023 1.5e-14 84.3 320 27.5
Cc06_g10200 Coffea canephora HOM05D001273 ORTHO05D000023 1.9e-14 84.0 327 29.4
Actinidia20411 Actinidia chinensis HOM05D001273 ORTHO05D000023 4.3e-14 82.8 328 27.4
vmacro10866 Vaccinium macrocarpon HOM05D001273 ORTHO05D000023 3.7e-13 79.7 142 35.2
Thecc.09G103900 Theobroma cacao HOM05D001273 ORTHO05D000023 1.4e-12 77.8 107 39.3
CSS0020653 Camellia sinensis var. sinensis HOM05D001273 ORTHO05D000023 4.0e-12 76.3 116 37.9
Cfa003211 Carpinus fangiana HOM05D001273 ORTHO05D000023 4.0e-12 76.3 285 29.5
TAR624G0236 Trochodendron aralioides HOM05D001273 ORTHO05D000023 1.2e-11 74.7 147 33.3
Dinv41652 Davidia involucrata HOM05D001273 ORTHO05D000023 2.0e-11 73.9 196 32.7
Manes.16G111400 Manihot esculenta HOM05D001273 ORTHO05D000023 4.5e-11 72.8 292 26.7
Hma1.2p1_0945F.1_g240220 Hydrangea macrophylla HOM05D001273 ORTHO05D000023 5.8e-11 72.4 286 27.3
Haze_25797 Corylus avellana HOM05D001273 ORTHO05D000023 7.6e-11 72.0 290 29.3
Gohir.D06G064400 Gossypium hirsutum HOM05D001273 ORTHO05D000023 7.6e-11 72.0 107 37.4
Rhsim05G0042000 Rhododendron simsii HOM05D001273 ORTHO05D000023 7.6e-11 72.0 167 34.1
Gohir.A06G065800 Gossypium hirsutum HOM05D001273 ORTHO05D000023 9.9e-11 71.6 107 37.4
MBI04_g27066_MAGBIO Magnolia biondii HOM05D001273 ORTHO05D000023 9.9e-11 71.6 300 26.3
Hund09234 Selenicereus undatus HOM05D001273 ORTHO05D000023 9.9e-11 71.6 316 26.6
Gorai.010G075200 Gossypium raimondii HOM05D001273 ORTHO05D000023 1.3e-10 71.2 107 37.4
ClCG11G002280 Citrullus lanatus HOM05D001273 ORTHO05D000023 1.7e-10 70.9 313 28.8
Potri.006G163100 Populus trichocarpa HOM05D001273 ORTHO05D000023 2.2e-10 70.5 307 26.1
Sabra06G0125500 Salix brachista HOM05D001273 ORTHO05D000023 3.8e-10 69.7 304 26.0
Duzib168G1568 Durio zibethinus HOM05D001273 ORTHO05D000023 8.4e-10 68.6 123 36.6
Sed0022257 Sechium edule HOM05D001273 ORTHO05D000023 8.4e-10 68.6 117 40.2
COL.COLO4_34785 Corchorus olitorius HOM05D001273 ORTHO05D000023 1.1e-09 68.2 123 34.1
CsaV3_2G002040 Cucumis sativus L. HOM05D001273 ORTHO05D000023 3.2e-09 66.6 305 24.9
Prupe.7G223600 Prunus persica HOM05D001273 ORTHO05D000023 5.5e-09 65.9 307 27.4
TWI63G0391 Tripterygium wilfordii HOM05D001273 ORTHO05D000023 5.5e-09 65.9 342 25.1
GSVIVG01015331001 Vitis vinifera HOM05D001273 ORTHO05D000023 5.5e-09 65.9 298 27.5
RcHm_v2.0_Chr2g0091431 Rosa chinensis HOM05D001273 ORTHO05D000023 2.1e-08 63.9 114 37.7
MELO3C004577.2 Cucumis melo HOM05D001273 ORTHO05D000023 3.5e-08 63.2 307 26.7
Migut.K00519 Erythranthe guttata HOM05D001273 ORTHO05D000023 3.5e-08 63.2 120 35.0
DCAR_024698 Daucus carota HOM05D001273 ORTHO05D000023 6.0e-08 62.4 295 27.5
CiPaw.03G227000 Carya illinoinensis HOM05D001273 ORTHO05D000023 1.3e-07 61.2 96 42.7
Dinv36704 Davidia involucrata HOM05D001273 ORTHO05D023773 1.3e-07 61.2 95 36.8
Eucgr.F01559 Eucalyptus grandis HOM05D001273 ORTHO05D000023 1.8e-07 60.8 280 26.8
Sc08g0007820 Simmondsia chinensis HOM05D001273 ORTHO05D000023 2.3e-07 60.5 286 26.9
SGA_v2.0_scaffold19G08759 Striga asiatica HOM05D001273 ORTHO05D000023 3.9e-07 59.7 107 40.2
FvH4_1g05780 Fragaria vesca HOM05D001273 ORTHO05D000023 6.7e-07 58.9 179 30.7
FAN19G2994 Fragaria x ananassa HOM05D001273 ORTHO05D000023 6.7e-07 58.9 179 30.7
FAN28G1921 Fragaria x ananassa HOM05D001273 ORTHO05D000023 6.7e-07 58.9 179 30.7
QL11p047070 Quercus lobata HOM05D001273 ORTHO05D023773 8.7e-07 58.5 108 37.0
PGR142G4117 Punica granatum HOM05D001273 ORTHO05D000023 1.1e-06 58.2 187 30.5
SalBow8G2593 Salvia bowleyana HOM05D001273 ORTHO05D000023 1.1e-06 58.2 107 32.7
unitig_0.g2550 Utricularia gibba HOM05D001273 ORTHO05D023773 1.1e-06 58.2 116 32.8
HPP92_024166 Vanilla planifolia HOM05D001273 ORTHO05D000023 1.1e-06 58.2 275 25.8
EL10Ac8g18963 Beta vulgaris HOM05D001273 ORTHO05D000023 1.9e-06 57.4 283 24.4
MD15G1193500 Malus domestica HOM05D001273 ORTHO05D000023 1.9e-06 57.4 128 33.6
PSO210G6932 Papaver somniferum HOM05D001273 ORTHO05D000023 1.9e-06 57.4 117 33.3
THA.LOC104804012 Tarenaya hassleriana HOM05D001273 ORTHO05D000023 1.9e-06 57.4 279 25.1
Thhalv10001924m.g Eutrema salsugineum HOM05D001273 ORTHO05D000023 2.5e-06 57.0 178 28.1
MD02G1059500 Malus domestica HOM05D001273 ORTHO05D000023 4.3e-06 56.2 179 28.5
QL02p042453 Quercus lobata HOM05D001273 ORTHO05D000023 5.6e-06 55.8 108 36.1
TPR.G23497 Trifolium pratense HOM05D001273 ORTHO05D000023 7.4e-06 55.5 107 35.5
Aqoxy7G03909 Aquilegia oxysepala HOM05D001273 ORTHO05D000023 9.6e-06 55.1 107 34.6
HanXRQChr09g0238911 Helianthus annuus HOM05D001273 ORTHO05D000023 9.6e-06 55.1 107 34.6


User provided reference genes

Program Settings