Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 9.2e-198 693.3 346 100.0
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.5e-195 686.0 346 98.8
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 6.0e-189 664.1 341 97.1
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 7.5e-184 647.1 352 92.9
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 2.1e-178 629.0 349 90.8
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 7.6e-176 620.5 350 90.6
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 1.9e-174 615.9 347 90.8
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 7.1e-174 614.0 347 90.5
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 2.1e-173 612.5 350 90.0
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 1.5e-168 596.3 347 86.7
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.8e-161 572.8 346 86.4
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.0e-161 571.6 308 93.2
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 4.2e-158 561.6 352 84.4
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 4.2e-158 561.6 352 84.4
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 4.2e-158 561.6 352 84.4
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 5.4e-158 561.2 349 84.8
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 5.4e-158 561.2 349 84.8
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 7.1e-158 560.8 352 84.1
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 3.3e-155 552.0 353 83.3
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 4.8e-154 548.1 332 86.7
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 2.2e-151 539.3 349 80.8
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.8e-144 514.6 277 91.7
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.8e-144 514.6 277 91.7
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 1.4e-142 510.0 327 81.0
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 1.4e-142 510.0 327 81.0
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 6.7e-140 501.1 280 90.7
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 6.7e-140 501.1 251 98.4
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 2.3e-132 476.1 277 85.6
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 8.2e-130 467.6 294 82.3
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 3.4e-128 462.2 234 98.7
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 1.7e-127 459.9 257 89.9
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 3.1e-121 439.1 287 77.7
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 1.6e-112 410.2 248 83.9
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 6.7e-108 394.8 201 97.5
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 9.1e-105 384.4 208 92.3
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.0e-103 380.9 208 92.3
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 1.0e-103 380.9 337 65.3
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 3.8e-103 379.0 255 77.6
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 6.5e-103 378.3 225 84.9
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 4.0e-100 369.0 224 83.5
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 2.5e-94 349.7 197 90.4
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.8e-92 343.6 346 60.1
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.8e-89 333.6 212 80.7
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 7.8e-88 328.2 198 83.3
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 7.8e-88 328.2 198 83.3
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 7.8e-88 328.2 198 83.3
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 2.8e-85 319.7 203 82.3
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 3.4e-83 312.8 192 84.4
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 8.6e-79 298.1 145 100.0
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 9.8e-75 284.6 215 69.8
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 1.7e-71 273.9 146 93.2
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.3e-70 269.2 159 86.2
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 8.9e-68 261.5 197 72.1
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 2.4e-65 253.4 163 79.8
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-64 251.1 139 89.9
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 7.8e-64 248.4 253 56.1
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 3.9e-63 246.1 253 56.1
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.1e-63 245.7 135 89.6
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.5e-62 243.4 149 83.9
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.8e-61 240.0 134 91.0
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 1.1e-60 238.0 173 74.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 2.6e-59 233.4 263 55.5
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 6.0e-56 222.2 134 82.1
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.1e-54 218.0 130 82.3
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 7.3e-54 215.3 152 73.0
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 7.3e-54 215.3 152 73.0
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 7.3e-54 215.3 152 73.0
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 7.3e-54 215.3 152 73.0
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.4e-51 206.1 124 82.3
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 4.9e-50 202.6 173 64.7
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 4.6e-48 196.1 147 76.2
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 9.9e-43 178.3 137 67.9
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 9.6e-38 161.8 86 88.4
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 4.0e-36 156.4 98 76.5
Gohir.A13G071500 Gossypium hirsutum HOM05D003517 ORTHO05D009798 5.3e-36 156.0 100 80.0
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.8e-35 152.5 131 64.1
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 1.7e-34 151.0 91 80.2
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.2e-34 150.6 180 48.9
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.6e-32 144.4 108 72.2
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 6.2e-29 132.5 110 61.8
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 2.9e-26 123.6 124 58.9
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 6.5e-26 122.5 80 80.0
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.2e-25 120.2 62 93.5
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.1e-24 117.5 98 67.3
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.3e-23 114.8 60 93.3
BraSC159t45733Z Brassica rapa HOM05D003517 ORTHO05D009798 2.8e-21 107.1 86 69.8
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 5.3e-20 102.8 58 86.2
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 7.7e-19 99.0 49 100.0
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.5e-17 92.8 62 72.6
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 2.1e-16 90.9 96 52.1
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 3.6e-16 90.1 123 42.3
Nitab4.5_0001152g0970 Nicotiana tabacum HOM05D003517 ORTHO05D025894 6.7e-15 85.9 66 66.7
Nitab4.5_0010321g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 3.3e-14 83.6 65 73.8
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 4.1e-12 76.6 36 97.2
Nitab4.5_0006196g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.9e-09 67.8 42 81.0
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 5.5e-09 66.2 37 81.1
CSS0018598 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 8.8e-07 58.9 42 66.7
Solyc11g030930.3 Solanum lycopersicum HOM05D003517 ORTHO05D009794 1.5e-06 58.2 31 83.9


User provided reference genes

Program Settings