Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1078.3 Capsicum annuum HOM05D002578 ORTHO05D005154 2.5e-36 154.8 74 100.0
CAN.G424.95 Capsicum annuum HOM05D002578 ORTHO05D005154 6.6e-29 130.2 67 94.0
Nitab4.5_0013360g0010 Nicotiana tabacum HOM05D002578 ORTHO05D005154 7.3e-28 126.7 67 91.0
Solyc00g500034.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 3.6e-27 124.4 67 88.1
TAR375G1061 Trochodendron aralioides HOM05D002578 ORTHO05D005154 5.3e-26 120.6 67 85.1
Peaxi162Scf00299g00118 Petunia axillaris HOM05D002578 ORTHO05D005154 9.0e-26 119.8 67 88.1
CAN.G127.12 Capsicum annuum HOM05D002578 ORTHO05D005154 1.5e-25 119.0 67 85.1
HanXRQChr00c0557g0575711 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-25 118.6 67 83.6
HanXRQChr01g0020181 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-25 118.6 67 83.6
HanXRQChr04g0127451 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-25 118.6 67 83.6
HanXRQChr10g0284421 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-25 118.6 67 83.6
HanXRQChr10g0318021 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-25 118.6 67 83.6
HanXRQChr12g0369891 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-25 118.6 67 83.6
HanXRQChr16g0526141 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-25 118.6 67 83.6
HanXRQCPg0580221 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-25 118.6 67 83.6
Nitab4.5_0004430g0040 Nicotiana tabacum HOM05D002578 ORTHO05D005154 2.6e-25 118.2 67 88.1
PSO548G0101 Papaver somniferum HOM05D002578 ORTHO05D005154 3.4e-25 117.9 70 78.6
Ah.10g027440 Amaranthus hybridus HOM05D002578 ORTHO05D005154 4.4e-25 117.5 67 83.6
Gohir.D11G067600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 5.8e-25 117.1 67 82.1
Hma1.2p1_0298F.1_g117740 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 9.9e-25 116.3 66 83.3
Hma1.2p1_0818F.1_g223306 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 9.9e-25 116.3 66 83.3
Hma1.2p1_0104F.1_g050140 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 1.3e-24 115.9 66 83.3
Gohir.1Z049834 Gossypium hirsutum HOM05D002578 ORTHO05D005154 2.9e-24 114.8 67 80.6
Gohir.A12G024500 Gossypium hirsutum HOM05D002578 ORTHO05D005154 2.9e-24 114.8 67 80.6
Lsat_1_v5_gn_3_22620 Lactuca sativa HOM05D002578 ORTHO05D005154 2.9e-24 114.8 67 80.6
ATCG00800 Arabidopsis thaliana HOM05D002578 ORTHO05D005154 6.4e-24 113.6 67 77.6
Sed0023475 Sechium edule HOM05D002578 ORTHO05D005154 6.4e-24 113.6 66 81.8
DCAR_032524 Daucus carota HOM05D002578 ORTHO05D005154 8.4e-24 113.2 67 80.6
BNapus_Darmor_BZH_scaffold_253p00370 Brassica napus HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
C03p38130 Brassica napus HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
BolSC29t60532H Brassica oleracea HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
BolSC35t60726H Brassica oleracea HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
BolSC56t61245H Brassica oleracea HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
BraA06t25386Z Brassica rapa HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
BraSC103t45443Z Brassica rapa HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
BraSC103t45487Z Brassica rapa HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
BraSC138t45551Z Brassica rapa HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
BraSC59t46568Z Brassica rapa HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
CARHR282270 Cardamine hirsuta HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 76.1
PGR111G0034 Punica granatum HOM05D002578 ORTHO05D005154 1.1e-23 112.8 67 77.6
Sc25g0002070 Simmondsia chinensis HOM05D002578 ORTHO05D005154 1.1e-23 112.8 69 76.8
Eucgr.C03015 Eucalyptus grandis HOM05D002578 ORTHO05D005154 1.4e-23 112.5 66 78.8
HanXRQChr14g0432301 Helianthus annuus HOM05D002578 ORTHO05D005154 1.4e-23 112.5 67 79.1
Duzib026G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 2.4e-23 111.7 67 80.6
Duzib086G0007 Durio zibethinus HOM05D002578 ORTHO05D005154 2.4e-23 111.7 67 80.6
Duzib125G0004 Durio zibethinus HOM05D002578 ORTHO05D005154 2.4e-23 111.7 67 80.6
Duzib256G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 2.4e-23 111.7 67 80.6
SalBow1G1132 Salvia bowleyana HOM05D002578 ORTHO05D005154 4.2e-23 110.9 66 78.8
Thhalv10010706m.g Eutrema salsugineum HOM05D002578 ORTHO05D005154 5.4e-23 110.5 67 76.1
Cpa.g.sc0.194 Carica papaya HOM05D002578 ORTHO05D005154 1.6e-22 109.0 67 79.1
CAN.G134.2 Capsicum annuum HOM05D002578 ORTHO05D005154 4.6e-22 107.5 55 90.9
Gohir.A08G071000 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.0e-21 106.3 67 76.1
Lsat_1_v5_gn_3_113300 Lactuca sativa HOM05D002578 ORTHO05D005154 1.3e-21 105.9 67 76.1
CSS0047935 Camellia sinensis var. sinensis HOM05D002578 ORTHO05D005154 1.7e-21 105.5 67 74.6
Potri.012G047500 Populus trichocarpa HOM05D002578 ORTHO05D005154 5.1e-21 104.0 70 68.6
Hund08206 Selenicereus undatus HOM05D002578 ORTHO05D005154 5.1e-21 104.0 72 75.0
Hund29530 Selenicereus undatus HOM05D002578 ORTHO05D005154 5.1e-21 104.0 72 75.0
Hund30213 Selenicereus undatus HOM05D002578 ORTHO05D005154 5.1e-21 104.0 72 75.0
Gorai.010G148900 Gossypium raimondii HOM05D002578 ORTHO05D005154 1.1e-20 102.8 67 73.1
Oeu062830.1 Olea europaea HOM05D002578 ORTHO05D005154 1.5e-20 102.4 69 75.4
Solyc12g035880.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 3.3e-20 101.3 67 73.1
Migut.D01327 Erythranthe guttata HOM05D002578 ORTHO05D005154 9.6e-20 99.8 60 80.0
Hund29503 Selenicereus undatus HOM05D002578 ORTHO05D005154 9.6e-20 99.8 71 73.2
Gorai.001G190500 Gossypium raimondii HOM05D002578 ORTHO05D002698 1.3e-19 99.4 60 78.3
LjContig00318g0021445 Lotus japonicus HOM05D002578 ORTHO05D005154 1.6e-19 99.0 67 67.2
LjContig00319g0008344 Lotus japonicus HOM05D002578 ORTHO05D005154 1.6e-19 99.0 67 67.2
LjContig00319g0015839 Lotus japonicus HOM05D002578 ORTHO05D005154 1.6e-19 99.0 67 67.2
arahy.Tifrunner.gnm1.ann1.I6CLRS Arachis hypogaea HOM05D002578 ORTHO05D005154 6.2e-19 97.1 67 71.6
arahy.Tifrunner.gnm1.ann1.YJ6L74 Arachis hypogaea HOM05D002578 ORTHO05D005154 1.1e-18 96.3 68 69.1
PGSC0003DMG400003499 Solanum tuberosum HOM05D002578 ORTHO05D005154 1.4e-18 95.9 47 89.4
arahy.Tifrunner.gnm1.ann1.ID3W56 Arachis hypogaea HOM05D002578 ORTHO05D005154 1.8e-18 95.5 67 70.1
arahy.Tifrunner.gnm1.ann1.R0YUWC Arachis hypogaea HOM05D002578 ORTHO05D005154 5.3e-18 94.0 67 68.7
Lsat_1_v5_gn_5_50461 Lactuca sativa HOM05D002578 ORTHO05D005154 1.2e-17 92.8 67 65.7
Zm00001eb039190 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb097380 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb115040 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb434870 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb435100 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb435640 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb437960 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb439940 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb439960 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Zm00001eb440780 Zea mays HOM05D002578 ORTHO05D005154 7.6e-17 90.1 77 58.4
Gohir.D06G105066 Gossypium hirsutum HOM05D002578 ORTHO05D005154 6.4e-16 87.0 50 76.0
Hund28761 Selenicereus undatus HOM05D002578 ORTHO05D005154 9.3e-15 83.2 67 67.2
Medtr4g051410 Medicago truncatula HOM05D002578 ORTHO05D005154 4.6e-14 80.9 65 60.0
Medtr8g038470 Medicago truncatula HOM05D002578 ORTHO05D005154 1.3e-13 79.3 60 63.3
Lalb_Chr17g0337521 Lupinus albus HOM05D002578 ORTHO05D005154 3.9e-13 77.8 53 67.9
Lalb_Chr25g0282891 Lupinus albus HOM05D002578 ORTHO05D005154 3.9e-13 77.8 54 63.0
Lsat_1_v5_gn_5_168100 Lactuca sativa HOM05D002578 ORTHO05D005154 5.1e-13 77.4 67 61.2
Medtr0002s0790 Medicago truncatula HOM05D002578 ORTHO05D005154 5.1e-13 77.4 92 45.7
Potri.017G072340 Populus trichocarpa HOM05D002578 ORTHO05D005154 2.5e-12 75.1 49 71.4
Atru.chr11.440 Acer truncatum HOM05D002578 ORTHO05D005154 4.3e-12 74.3 60 68.3
Aqoxy5G00925 Aquilegia oxysepala HOM05D002578 ORTHO05D005154 2.1e-11 72.0 48 72.9
HanXRQChr11g0321141 Helianthus annuus HOM05D002578 ORTHO05D002698 4.8e-11 70.9 36 86.1
HanXRQChr16g0503681 Helianthus annuus HOM05D002578 ORTHO05D005154 5.8e-09 63.9 68 52.9
Psat4g046880 Pisum sativum HOM05D002578 ORTHO05D005154 6.5e-08 60.5 75 45.3
BraSC58t46504Z Brassica rapa HOM05D002578 ORTHO05D005154 4.2e-07 57.8 36 63.9
Sed0004436 Sechium edule HOM05D002578 ORTHO05D005154 3.5e-06 54.7 66 50.0
Lalb_Chr23g0274271 Lupinus albus HOM05D002578 ORTHO05D005154 6.0e-06 53.9 36 63.9


User provided reference genes

Program Settings