Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1062.1 Capsicum annuum HOM05D000739 ORTHO05D115208 3.3e-74 281.6 138 100.0
Nitab4.5_0003969g0040 Nicotiana tabacum HOM05D000739 ORTHO05D003022 5.4e-08 61.6 92 44.6
CAN.G1733.1 Capsicum annuum HOM05D004190 ORTHO05D004692 3.5e-07 58.9 48 64.6
Rhsim09G0164900 Rhododendron simsii HOM05D000739 ORTHO05D003022 7.8e-07 57.8 133 35.3
Hma1.2p1_0533F.1_g173540 Hydrangea macrophylla HOM05D000739 ORTHO05D003022 1.3e-06 57.0 125 33.6
RcHm_v2.0_Chr2g0117191 Rosa chinensis HOM05D000739 ORTHO05D003022 2.3e-06 56.2 125 32.0
EL10Ac7g15981 Beta vulgaris HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
Cpa.g.sc190.9 Carica papaya HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
Ca_01337_v3 Cicer arietinum L. HOM05D000739 ORTHO05D003022 3.0e-06 55.8 123 34.1
FvH4_7g22040 Fragaria vesca HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
FAN01G0625 Fragaria x ananassa HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
FAN01G3137 Fragaria x ananassa HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
FAN03G1241 Fragaria x ananassa HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
FAN06G4919 Fragaria x ananassa HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
FAN10G2438 Fragaria x ananassa HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
RcHm_v2.0_Chr1g0366401 Rosa chinensis HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
SGA_v2.0_scaffold91G28091 Striga asiatica HOM05D000739 ORTHO05D003022 3.0e-06 55.8 125 33.6
arahy.Tifrunner.gnm1.ann1.4PJH6V Arachis hypogaea HOM05D002354 ORTHO05D002469 3.9e-06 55.5 123 34.1
arahy.Tifrunner.gnm1.ann1.C96M7R Arachis hypogaea HOM05D002354 ORTHO05D002469 3.9e-06 55.5 123 34.1
Gohir.A03G040100 Gossypium hirsutum HOM05D000739 ORTHO05D003022 3.9e-06 55.5 125 33.6
Gohir.D03G127900 Gossypium hirsutum HOM05D000739 ORTHO05D003022 3.9e-06 55.5 125 33.6
Gorai.003G134600 Gossypium raimondii HOM05D000739 ORTHO05D003022 3.9e-06 55.5 125 33.6
GSVIVG01016574001 Vitis vinifera HOM05D000739 ORTHO05D003022 3.9e-06 55.5 123 34.1
Haze_17042 Corylus avellana HOM05D000739 ORTHO05D003022 5.1e-06 55.1 125 34.4
FAN18G0431 Fragaria x ananassa HOM05D000739 ORTHO05D001171 5.1e-06 55.1 125 33.6
Glyma.11G141200 Glycine max HOM05D000739 ORTHO05D003022 5.1e-06 55.1 123 34.1
Lj2C1057T19 Lonicera japonica HOM05D000739 ORTHO05D003022 5.1e-06 55.1 125 32.8
Medtr2g096660 Medicago truncatula HOM05D000739 ORTHO05D003022 5.1e-06 55.1 123 34.1
Phvul.011G065700 Phaseolus vulgaris HOM05D000739 ORTHO05D003022 5.1e-06 55.1 123 34.1
Atru.chr3.3841 Acer truncatum HOM05D000739 ORTHO05D003022 6.6e-06 54.7 123 34.1
Actinidia33859 Actinidia chinensis HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
CAN.G1733.2 Capsicum annuum HOM05D004190 ORTHO05D004692 6.6e-06 54.7 48 52.1
Ciclev10028768m.g Citrus clementina HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 33.6
FAN06G3454 Fragaria x ananassa HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
HanXRQChr02g0044511 Helianthus annuus HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
Lj1A157T40 Lonicera japonica HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
Manes.04G032900 Manihot esculenta HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
Psat5g282880 Pisum sativum HOM05D000739 ORTHO05D003022 6.6e-06 54.7 123 34.1
Rhsim01G0225700 Rhododendron simsii HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
Solyc11g066150.3 Solanum lycopersicum HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
Sopen11g025920 Solanum pennellii HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
PGSC0003DMG400000404 Solanum tuberosum HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
TWI75G1429 Tripterygium wilfordii HOM05D000739 ORTHO05D003022 6.6e-06 54.7 125 32.8
Actinidia07722 Actinidia chinensis HOM05D000739 ORTHO05D003022 8.6e-06 54.3 135 32.6
CANSAT56G1641 Cannabis sativa HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
CANSAT56G2385 Cannabis sativa HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
CANSAT56G3874 Cannabis sativa HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
AUR62001819 Chenopodium quinoa HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
COL.COLO4_18475 Corchorus olitorius HOM05D000739 ORTHO05D003022 8.6e-06 54.3 123 34.1
Duzib168G0875 Durio zibethinus HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
Thhalv10016891m.g Eutrema salsugineum HOM05D000739 ORTHO05D003022 8.6e-06 54.3 133 33.1
Nitab4.5_0001831g0130 Nicotiana tabacum HOM05D000739 ORTHO05D003022 8.6e-06 54.3 123 34.1
Oeu033240.1 Olea europaea HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
Oeu038983.3 Olea europaea HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
SGA_v2.0_scaffold97G29145 Striga asiatica HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
Thecc.09G325300 Theobroma cacao HOM05D000739 ORTHO05D003022 8.6e-06 54.3 125 32.8
VMungo1127G1911 Vigna mungo HOM05D000739 ORTHO05D003022 8.6e-06 54.3 123 33.3


User provided reference genes

Program Settings