Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1030.28 Capsicum annuum HOM05D006287 ORTHO05D008192 3.4e-35 152.1 153 100.0
SGA_v2.0_scaffold22G09931 Striga asiatica HOM05D006287 ORTHO05D008192 4.6e-16 88.6 152 73.0
MSTRG.25851 Avicennia marina HOM05D006287 ORTHO05D008192 6.0e-16 88.2 152 71.7
Ah.13g068920 Amaranthus hybridus HOM05D006287 ORTHO05D008192 8.6e-15 84.3 57 70.2
ClCG02G013330 Citrullus lanatus HOM05D006287 ORTHO05D008192 1.1e-14 84.0 58 69.0
Oeu008766.1 Olea europaea HOM05D006287 ORTHO05D008192 1.9e-14 83.2 55 70.9
CSS0042508 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 4.3e-14 82.0 152 77.0
Sc25g0000480 Simmondsia chinensis HOM05D006287 ORTHO05D008192 7.3e-14 81.3 54 72.2
Oeu032501.2 Olea europaea HOM05D006287 ORTHO05D008192 9.5e-14 80.9 55 69.1
LjContig00081g0002723 Lotus japonicus HOM05D006287 ORTHO05D008192 4.7e-13 78.6 51 68.6
AUR62021186 Chenopodium quinoa HOM05D006287 ORTHO05D008192 5.2e-12 75.1 55 65.5
Gohir.A10G099700 Gossypium hirsutum HOM05D006287 ORTHO05D008192 6.8e-12 74.7 49 73.5
DCAR_006447 Daucus carota HOM05D006287 ORTHO05D008192 1.5e-11 73.6 58 58.6
TPR.G5606 Trifolium pratense HOM05D006287 ORTHO05D008192 3.4e-11 72.4 58 67.2
EL10Ac3g05636 Beta vulgaris HOM05D006287 ORTHO05D008192 6.4e-10 68.2 55 60.0
Manes.03G017400 Manihot esculenta HOM05D006287 ORTHO05D008192 6.4e-10 68.2 48 64.6
CiPaw.06G059600 Carya illinoinensis HOM05D006287 ORTHO05D008192 8.4e-10 67.8 47 72.3
Ciclev10010816m.g Citrus clementina HOM05D006287 ORTHO05D008192 1.9e-09 66.6 54 66.7
CsaV3_2G017510 Cucumis sativus L. HOM05D006287 ORTHO05D008192 2.4e-09 66.2 47 61.7
Thecc.09G149000 Theobroma cacao HOM05D006287 ORTHO05D008192 5.4e-09 65.1 45 68.9
Thhalv10010921m.g Eutrema salsugineum HOM05D006287 ORTHO05D008192 7.1e-09 64.7 49 65.3
Carub.0005s2160 Capsella rubella HOM05D006287 ORTHO05D008192 2.1e-08 63.2 49 65.3
Oeu030203.1 Olea europaea HOM05D006287 ORTHO05D000003 1.0e-07 60.8 57 50.9
CARHR164980 Cardamine hirsuta HOM05D006287 ORTHO05D008192 1.7e-07 60.1 43 69.8
Nitab4.5_0003498g0090 Nicotiana tabacum HOM05D006287 ORTHO05D008192 3.9e-07 58.9 112 68.8
FAN08G1130 Fragaria x ananassa HOM05D006287 ORTHO05D008192 6.6e-07 58.2 58 53.4
AL5G36090 Arabidopsis lyrata HOM05D006287 ORTHO05D008192 1.1e-06 57.4 45 64.4
AUR62021185 Chenopodium quinoa HOM05D006287 ORTHO05D008192 3.3e-06 55.8 55 50.9
Solyc08g067060.2 Solanum lycopersicum HOM05D006287 ORTHO05D008192 3.3e-06 55.8 28 89.3
AT3G54980 Arabidopsis thaliana HOM05D006287 ORTHO05D008192 7.3e-06 54.7 43 62.8
PGSC0003DMG400023145 Solanum tuberosum HOM05D006287 ORTHO05D008192 7.3e-06 54.7 26 100.0


User provided reference genes

Program Settings