Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p68470 Brassica napus HOM05D000882 ORTHO05D026818 4.0e-50 201.1 98 100.0
C09p68490 Brassica napus HOM05D000882 ORTHO05D026818 5.1e-45 184.1 87 100.0
BolC9t59593H Brassica oleracea HOM05D000882 ORTHO05D026818 5.1e-45 184.1 87 100.0
AL5G33180 Arabidopsis lyrata HOM05D000882 ORTHO05D026818 3.2e-23 111.7 86 65.1
AL6G34750 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 5.2e-13 77.8 80 47.5
AT2G02290 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 1.5e-12 76.3 80 43.8
CARHR190050 Cardamine hirsuta HOM05D000882 ORTHO05D001142 1.5e-12 76.3 86 44.2
BcaB04g20930 Brassica carinata HOM05D000882 ORTHO05D039370 2.0e-12 75.9 87 43.7
BcaC09g48504 Brassica carinata HOM05D000882 ORTHO05D039370 2.0e-12 75.9 87 43.7
Aa31LG8G2490 Aethionema arabicum HOM05D000882 ORTHO05D001142 3.4e-12 75.1 86 43.0
AT5G23470 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 3.4e-12 75.1 80 43.8
DCAR_002268 Daucus carota HOM05D000882 ORTHO05D001142 7.5e-12 73.9 88 46.6
Thhalv10014191m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 1.3e-11 73.2 98 42.9
Thhalv10015557m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 1.3e-11 73.2 98 42.9
Thhalv10022510m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 1.3e-11 73.2 98 42.9
C09p68460 Brassica napus HOM05D000882 ORTHO05D026804 1.7e-11 72.8 56 60.7
C09p68480 Brassica napus HOM05D000882 ORTHO05D026804 1.7e-11 72.8 56 60.7
BolC9t59594H Brassica oleracea HOM05D000882 ORTHO05D026804 1.7e-11 72.8 56 60.7
CARHR179180 Cardamine hirsuta HOM05D000882 ORTHO05D001142 2.2e-11 72.4 83 42.2
AL3G42690 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 2.8e-11 72.0 89 41.6
AT3G19595 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 2.8e-11 72.0 81 45.7
AT3G19600 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 2.8e-11 72.0 81 45.7
Carub.0003s1945 Capsella rubella HOM05D000882 ORTHO05D001142 2.8e-11 72.0 81 45.7
Carub.0003s1946 Capsella rubella HOM05D000882 ORTHO05D001142 2.8e-11 72.0 84 40.5
CARHR092870 Cardamine hirsuta HOM05D000882 ORTHO05D001142 2.8e-11 72.0 95 43.2
BcaB04g20691 Brassica carinata HOM05D000882 ORTHO05D001142 3.7e-11 71.6 96 40.6
C03p50470 Brassica napus HOM05D000882 ORTHO05D001142 3.7e-11 71.6 85 41.2
DCAR_002267 Daucus carota HOM05D000882 ORTHO05D001142 3.7e-11 71.6 101 41.6
Thhalv10021915m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 3.7e-11 71.6 90 43.3
Aa31LG11G2880 Aethionema arabicum HOM05D000882 ORTHO05D001142 4.8e-11 71.2 97 39.2
Carub.0003s2702 Capsella rubella HOM05D000882 ORTHO05D001142 4.8e-11 71.2 95 40.0
Thhalv10022155m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 4.8e-11 71.2 88 40.9
AT5G54210 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 6.3e-11 70.9 82 42.7
BcaC01g03616 Brassica carinata HOM05D000882 ORTHO05D001142 6.3e-11 70.9 85 41.2
BolC3t17337H Brassica oleracea HOM05D000882 ORTHO05D001142 6.3e-11 70.9 85 41.2
THA.LOC109116849 Tarenaya hassleriana HOM05D000882 ORTHO05D001142 6.3e-11 70.9 91 42.9
Sp6g11720 Schrenkiella parvula HOM05D000882 ORTHO05D001142 8.3e-11 70.5 85 41.2
BraA01t03590Z Brassica rapa HOM05D000882 ORTHO05D001142 1.1e-10 70.1 85 43.5
CARHR234240 Cardamine hirsuta HOM05D000882 ORTHO05D001142 1.1e-10 70.1 86 40.7
AL8G29440 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 1.4e-10 69.7 96 41.7
BcaC05g28444 Brassica carinata HOM05D000882 ORTHO05D001142 1.4e-10 69.7 84 41.7
C05p45290 Brassica napus HOM05D000882 ORTHO05D001142 1.4e-10 69.7 84 41.7
Aa31LG8G6530 Aethionema arabicum HOM05D000882 ORTHO05D001142 1.8e-10 69.3 81 44.4
BcaC09g48925 Brassica carinata HOM05D000882 ORTHO05D001142 1.8e-10 69.3 87 41.4
C01p44510 Brassica napus HOM05D000882 ORTHO05D001142 1.8e-10 69.3 87 41.4
BolC1t04417H Brassica oleracea HOM05D000882 ORTHO05D001142 1.8e-10 69.3 87 41.4
Carub.0003s1725 Capsella rubella HOM05D000882 ORTHO05D001142 1.8e-10 69.3 90 41.1
CARHR267450 Cardamine hirsuta HOM05D000882 ORTHO05D001142 1.8e-10 69.3 82 41.5
AL5G33170 Arabidopsis lyrata HOM05D000882 ORTHO05D026804 2.4e-10 68.9 75 45.3
AT1G20320 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 2.4e-10 68.9 91 40.7
A05p30020 Brassica napus HOM05D000882 ORTHO05D001142 2.4e-10 68.9 84 40.5
BraA05t21844Z Brassica rapa HOM05D000882 ORTHO05D001142 2.4e-10 68.9 84 40.5
BcaC01g03618 Brassica carinata HOM05D000882 ORTHO05D001142 3.1e-10 68.6 90 38.9
C03p50450 Brassica napus HOM05D000882 ORTHO05D001142 4.1e-10 68.2 87 40.2
CARHR095050 Cardamine hirsuta HOM05D000882 ORTHO05D001142 4.1e-10 68.2 96 37.5
Sp3g17640 Schrenkiella parvula HOM05D000882 ORTHO05D001142 4.1e-10 68.2 85 42.4
THA.LOC104818139 Tarenaya hassleriana HOM05D000882 ORTHO05D001142 4.1e-10 68.2 97 37.1
AT2G04930 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 5.4e-10 67.8 89 39.3
THA.LOC104810600 Tarenaya hassleriana HOM05D000882 ORTHO05D023640 5.4e-10 67.8 82 42.7
AL1G33150 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 9.1e-10 67.0 95 38.9
BcaB06g25982 Brassica carinata HOM05D000882 ORTHO05D001142 9.1e-10 67.0 89 38.2
A03p41310 Brassica napus HOM05D000882 ORTHO05D001142 9.1e-10 67.0 87 39.1
Sp6g16160 Schrenkiella parvula HOM05D000882 ORTHO05D001142 9.1e-10 67.0 80 41.2
THA.LOC104820857 Tarenaya hassleriana HOM05D000882 ORTHO05D001142 9.1e-10 67.0 82 48.8
Atru.chr9.2328 Acer truncatum HOM05D000882 ORTHO05D001142 1.2e-09 66.6 92 35.9
AT1G43600 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 1.2e-09 66.6 87 41.4
BraA03t13285Z Brassica rapa HOM05D000882 ORTHO05D001142 1.2e-09 66.6 96 37.5
AT1G43610 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 1.6e-09 66.2 87 41.4
AT3G17550 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 1.6e-09 66.2 90 37.8
BcaC05g28509 Brassica carinata HOM05D000882 ORTHO05D001142 1.6e-09 66.2 89 37.1
BolC5t33312H Brassica oleracea HOM05D000882 ORTHO05D001142 1.6e-09 66.2 89 37.1
Thhalv10022381m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 1.6e-09 66.2 91 42.9
AL3G30610 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 2.0e-09 65.9 90 37.8
BcaB04g19051 Brassica carinata HOM05D000882 ORTHO05D001142 2.0e-09 65.9 87 40.2
BolC1t04886H Brassica oleracea HOM05D000882 ORTHO05D001142 2.0e-09 65.9 95 36.8
Carub.0003s1497 Capsella rubella HOM05D000882 ORTHO05D001142 2.7e-09 65.5 90 35.6
Carub.0003s1944 Capsella rubella HOM05D000882 ORTHO05D001142 3.5e-09 65.1 88 39.8
BcaB06g26028 Brassica carinata HOM05D000882 ORTHO05D001142 4.5e-09 64.7 85 40.0
A05p30350 Brassica napus HOM05D000882 ORTHO05D001142 4.5e-09 64.7 89 36.0
CARHR151230 Cardamine hirsuta HOM05D000882 ORTHO05D001142 4.5e-09 64.7 82 42.7
BcaB01g02806 Brassica carinata HOM05D000882 ORTHO05D001142 5.9e-09 64.3 91 37.4
BcaB04g19052 Brassica carinata HOM05D000882 ORTHO05D001142 5.9e-09 64.3 85 38.8
A01p38620 Brassica napus HOM05D000882 ORTHO05D001142 5.9e-09 64.3 94 36.2
C05p45930 Brassica napus HOM05D000882 ORTHO05D001142 5.9e-09 64.3 89 37.1
BraA01t03922Z Brassica rapa HOM05D000882 ORTHO05D001142 5.9e-09 64.3 94 36.2
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 1.0e-08 63.5 96 37.5
Thhalv10019698m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 1.0e-08 63.5 81 43.2
Thhalv10023181m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 1.0e-08 63.5 91 34.1
BcaC09g48487 Brassica carinata HOM05D000882 ORTHO05D001142 1.3e-08 63.2 95 34.7
C01p49270 Brassica napus HOM05D000882 ORTHO05D001142 1.3e-08 63.2 95 34.7
BcaC03g17470 Brassica carinata HOM05D000882 ORTHO05D001142 1.7e-08 62.8 89 37.1
AL1G51650 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 3.8e-08 61.6 87 37.9
BcaB04g20931 Brassica carinata HOM05D000882 ORTHO05D023640 3.8e-08 61.6 83 36.1
BcaB06g26030 Brassica carinata HOM05D000882 ORTHO05D001142 3.8e-08 61.6 84 38.1
BcaC03g17545 Brassica carinata HOM05D000882 ORTHO05D001142 3.8e-08 61.6 89 37.1
BolC2t11572H Brassica oleracea HOM05D000882 ORTHO05D001142 3.8e-08 61.6 89 37.1
Carub.0001s3460 Capsella rubella HOM05D000882 ORTHO05D001142 3.8e-08 61.6 95 36.8
CARHR090290 Cardamine hirsuta HOM05D000882 ORTHO05D001142 5.0e-08 61.2 82 35.4
FvH4_4g02680 Fragaria vesca HOM05D000882 ORTHO05D029557 5.0e-08 61.2 92 37.0
Thhalv10027357m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 6.5e-08 60.8 90 42.2
RcHm_v2.0_Chr3g0463881 Rosa chinensis HOM05D000882 ORTHO05D029557 6.5e-08 60.8 89 33.7
Carub.0001s3467 Capsella rubella HOM05D000882 ORTHO05D001142 1.1e-07 60.1 82 37.8
BolC5t33252H Brassica oleracea HOM05D000882 ORTHO05D001142 1.5e-07 59.7 84 39.3
BraA05t21873Z Brassica rapa HOM05D000882 ORTHO05D001142 1.5e-07 59.7 89 33.7
FAN17G0306 Fragaria x ananassa HOM05D000882 ORTHO05D029557 1.5e-07 59.7 92 35.9
AL3G27730 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 1.9e-07 59.3 52 50.0
Carub.0006s2839 Capsella rubella HOM05D000882 ORTHO05D001142 1.9e-07 59.3 85 36.5
CARHR186020 Cardamine hirsuta HOM05D000882 ORTHO05D001142 2.5e-07 58.9 86 36.0
FvH4_7g07841 Fragaria vesca HOM05D000882 ORTHO05D001142 3.2e-07 58.5 85 36.5
QL10p015492 Quercus lobata HOM05D000882 ORTHO05D001142 3.2e-07 58.5 92 41.3
BcaC01g04733 Brassica carinata HOM05D000882 ORTHO05D001142 4.2e-07 58.2 83 37.3
BolC3t15745H Brassica oleracea HOM05D000882 ORTHO05D001142 4.2e-07 58.2 83 37.3
COL.COLO4_12701 Corchorus olitorius HOM05D000882 ORTHO05D001142 4.2e-07 58.2 79 36.7
AL3G27850 Arabidopsis lyrata HOM05D000882 ORTHO05D023640 5.5e-07 57.8 62 38.7
RcHm_v2.0_Chr7g0189951 Rosa chinensis HOM05D000882 ORTHO05D001142 5.5e-07 57.8 92 31.5
AT5G58003 Arabidopsis thaliana HOM05D000882 ORTHO05D001142 7.2e-07 57.4 86 34.9
Sp6g08480 Schrenkiella parvula HOM05D000882 ORTHO05D001142 9.4e-07 57.0 91 36.3
Thhalv10013455m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 1.6e-06 56.2 86 36.0
Aa31LG3G13800 Aethionema arabicum HOM05D000882 ORTHO05D001142 2.7e-06 55.5 87 36.8
BcaB01g04470 Brassica carinata HOM05D000882 ORTHO05D001142 2.7e-06 55.5 86 34.9
BcaC04g19919 Brassica carinata HOM05D000882 ORTHO05D001142 3.6e-06 55.1 86 34.9
BolC9t57833H Brassica oleracea HOM05D000882 ORTHO05D001142 3.6e-06 55.1 86 34.9
Carub.0008s1854 Capsella rubella HOM05D000882 ORTHO05D001142 3.6e-06 55.1 86 34.9
CARHR271800 Cardamine hirsuta HOM05D000882 ORTHO05D001142 3.6e-06 55.1 87 36.8
Zm00001eb192410 Zea mays HOM05D000882 ORTHO05D001142 3.6e-06 55.1 83 37.3
AL8G34090 Arabidopsis lyrata HOM05D000882 ORTHO05D001142 4.7e-06 54.7 86 34.9
A10p16170 Brassica napus HOM05D000882 ORTHO05D001142 4.7e-06 54.7 86 34.9
C09p49840 Brassica napus HOM05D000882 ORTHO05D001142 4.7e-06 54.7 86 34.9
BraA10t43612Z Brassica rapa HOM05D000882 ORTHO05D001142 4.7e-06 54.7 86 34.9
CDE07G0833 Ceratophyllum demersum HOM05D000882 ORTHO05D001142 4.7e-06 54.7 85 32.9
Thhalv10000277m.g Eutrema salsugineum HOM05D000882 ORTHO05D001142 4.7e-06 54.7 57 42.1
BcaB08g36159 Brassica carinata HOM05D000882 ORTHO05D001142 6.1e-06 54.3 86 34.9
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 6.1e-06 54.3 86 33.7
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 6.1e-06 54.3 86 33.7
C03p14660 Brassica napus HOM05D000882 ORTHO05D001142 6.1e-06 54.3 86 33.7
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 6.1e-06 54.3 86 33.7
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 6.1e-06 54.3 86 33.7
CDE04G0079 Ceratophyllum demersum HOM05D000882 ORTHO05D001142 6.1e-06 54.3 85 32.9
RcHm_v2.0_Chr7g0189941 Rosa chinensis HOM05D000882 ORTHO05D001142 6.1e-06 54.3 83 33.7
Sp6g19670 Schrenkiella parvula HOM05D000882 ORTHO05D001142 6.1e-06 54.3 86 33.7
FAN13G1030 Fragaria x ananassa HOM05D000882 ORTHO05D001142 8.0e-06 53.9 83 34.9
THA.LOC104816771 Tarenaya hassleriana HOM05D000882 ORTHO05D001142 8.0e-06 53.9 86 33.7


User provided reference genes

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